; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0013478 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0013478
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionhistone H1
Genome locationchr1:50600080..50600811
RNA-Seq ExpressionLag0013478
SyntenyLag0013478
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0009414 - response to water deprivation (biological process)
GO:0016584 - nucleosome positioning (biological process)
GO:0030261 - chromosome condensation (biological process)
GO:0045910 - negative regulation of DNA recombination (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0031492 - nucleosomal DNA binding (molecular function)
InterPro domainsIPR005818 - Linker histone H1/H5, domain H15
IPR005819 - Linker histone H1/H5
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034103.1 hypothetical protein SDJN02_03830 [Cucurbita argyrosperma subsp. argyrosperma]2.4e-7584.21Show/hide
Query:  MSSTGEVEVKVPAEDVPPAEVPAAEEPKVAEKPVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKIL
        MSSTGE EVKVP ED P  EVP+AEE K AEKPV+EKK RT REKKPRQ+KVASHPPYFQMIKEAI+SLNEK+GSSPYAIAKYMEEKHK VLPANFRKIL
Subjt:  MSSTGEVEVKVPAEDVPPAEVPAAEEPKVAEKPVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKIL

Query:  ALQLKNSTAKGKLTKIKASYKLSEAGKKDKKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAKKPKKTTPAKPKQPKSIRSPA
        ALQLKNSTAKGKL K+KASY+LSEAGKKDKK SKVAKANAEKK +Q R+TR+TA KR     K+E ASKAAKAVKKVVAKKPK+TTPAKPKQPKSIRSPA
Subjt:  ALQLKNSTAKGKLTKIKASYKLSEAGKKDKKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAKKPKKTTPAKPKQPKSIRSPA

Query:  AKRAKKAVA
        AKRAKKAVA
Subjt:  AKRAKKAVA

XP_022950733.1 histone H1 [Cucurbita moschata]8.4e-7684.69Show/hide
Query:  MSSTGEVEVKVPAEDVPPAEVPAAEEPKVAEKPVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKIL
        MSSTGE EVKVPAED P  EVP+AEE K AEKPV+EKK RTPREKKPRQ+KVASHPPYFQMI EAI+SLNEK+GSSPYAIAKYMEEKHK VLPANFRKIL
Subjt:  MSSTGEVEVKVPAEDVPPAEVPAAEEPKVAEKPVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKIL

Query:  ALQLKNSTAKGKLTKIKASYKLSEAGKKDKKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAKKPKKTTPAKPKQPKSIRSPA
        ALQLKNSTAKGKL KIKASY+LSEAGKKDKK SKVAKANAEKK +Q R+TR+TA KR     K+E ASKAAKA+KKVVAKKPK+TTPAKPKQPKSIRSPA
Subjt:  ALQLKNSTAKGKLTKIKASYKLSEAGKKDKKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAKKPKKTTPAKPKQPKSIRSPA

Query:  AKRAKKAVA
        AKRAKKAVA
Subjt:  AKRAKKAVA

XP_022979052.1 histone H1 [Cucurbita maxima]3.4e-7785.65Show/hide
Query:  MSSTGEVEVKVPAEDVPPAEVPAAEEPKVAEKPVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKIL
        MSSTGE EVKVPAED P AEVP+AEEPK AEKPV+EKK RTPREKKPRQ+KVASHPPYFQMIKEAI+SLNEK+GSSPYAIAKYMEEKHK VLPANFRKIL
Subjt:  MSSTGEVEVKVPAEDVPPAEVPAAEEPKVAEKPVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKIL

Query:  ALQLKNSTAKGKLTKIKASYKLSEAGKKDKKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAKKPKKTTPAKPKQPKSIRSPA
        ALQLKNSTAKGKL KIKASY+LSEAGKKDKK SKVAKANAEK  +Q R+TR+TA KR     K+E ASK AKAVKKVVAKKPK+TTPAKPKQPKSIRSPA
Subjt:  ALQLKNSTAKGKLTKIKASYKLSEAGKKDKKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAKKPKKTTPAKPKQPKSIRSPA

Query:  AKRAKKAVA
        AKRAKKAVA
Subjt:  AKRAKKAVA

XP_023544256.1 histone H1 [Cucurbita pepo subsp. pepo]7.6e-7785.65Show/hide
Query:  MSSTGEVEVKVPAEDVPPAEVPAAEEPKVAEKPVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKIL
        MSSTGE EVKVPAED P AEVP+AEEPK +EKPV+EKK RTPR KKPRQ+KVASHPPYFQMIKEAI+SLNEK+GSSPYAIAKYMEEKHK VLPANFRKIL
Subjt:  MSSTGEVEVKVPAEDVPPAEVPAAEEPKVAEKPVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKIL

Query:  ALQLKNSTAKGKLTKIKASYKLSEAGKKDKKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAKKPKKTTPAKPKQPKSIRSPA
        ALQLKNSTAKGKL KIKASY+LSEAGKKDKK SKVAKANAEKK +Q R+TR+TA KR     K+E ASKAAKAVKKVVAKKPK+TTPAKPKQPKSIRSPA
Subjt:  ALQLKNSTAKGKLTKIKASYKLSEAGKKDKKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAKKPKKTTPAKPKQPKSIRSPA

Query:  AKRAKKAVA
        AKRAKKAVA
Subjt:  AKRAKKAVA

XP_038883821.1 histone H1 [Benincasa hispida]1.4e-7585.78Show/hide
Query:  MSSTGEVEVKVPAEDVPPAEVPAAEEPKVAEK-PVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKI
        MSS GE EVKVPAEDVPP  VPAAEEPK AEK PVKEKKPR PREKKPRQ+KVASHPPYFQMI EAISSLNEK+GSSPYAIAKYMEEKHKAVLPANFRKI
Subjt:  MSSTGEVEVKVPAEDVPPAEVPAAEEPKVAEK-PVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKI

Query:  LALQLKNSTAKGKLTKIKASYKLSEAG-KKDKKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAKKPKKTTPAKPKQPKSIRS
        L+LQLKNSTAKGKLTKIKASYKLSE G KKDK  +KVAKANAEKK +Q R+TR+T  KRK A KK+E ASKAAKAVKKVVAKKPK++TPAKPK PKSIRS
Subjt:  LALQLKNSTAKGKLTKIKASYKLSEAG-KKDKKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAKKPKKTTPAKPKQPKSIRS

Query:  PAAKRAKKAVA
        PAAKRAKKAVA
Subjt:  PAAKRAKKAVA

TrEMBL top hitse value%identityAlignment
A0A0A0KJB6 Histone H18.8e-7182.86Show/hide
Query:  MSSTGE-VEVKVPAEDVPPAEVPAAEEPKVAEKPVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKI
        MSSTGE  EVKVPAEDV P EVPA EEPK  EKPVKEKKPR  REKKPRQ+KVASHPPYFQMI EAISSLNEK+GSSPYAIAKYMEEKHKAVLPANFRKI
Subjt:  MSSTGE-VEVKVPAEDVPPAEVPAAEEPKVAEKPVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKI

Query:  LALQLKNSTAKGKLTKIKASYKLSEAG-KKDKKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAKKPKKTTPAKPKQPKSIRS
        LALQLKNSTAKGKLTKIKASYKLSE G KKD   +KVAKANAEKK +Q R+TR+T  KRK A K EE  S   KAVKKVVAKKPK++TPAKPKQPKSI+S
Subjt:  LALQLKNSTAKGKLTKIKASYKLSEAG-KKDKKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAKKPKKTTPAKPKQPKSIRS

Query:  PAAKRAKKAV
        PAAKRAKKAV
Subjt:  PAAKRAKKAV

A0A5A7SK97 Histone H12.6e-7082.94Show/hide
Query:  MSSTGE-VEVKVPAEDVPPAE-VPAAEEPKVAEKPVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRK
        M+STGE  EVKVPAEDV P E VPA EEPK  EKPVKEKKPR PREKKPRQ+KVASHPPYFQMI EAISSLNEK+GSSPYAIAKYMEEKHKAVLPANFRK
Subjt:  MSSTGE-VEVKVPAEDVPPAE-VPAAEEPKVAEKPVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRK

Query:  ILALQLKNSTAKGKLTKIKASYKLSEAG-KKDKKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAKKPKKTTPAKPKQPKSIR
        ILALQLKNSTAKGKLTKIKASYKLSE G KKDK  +KVAKANAEK  +Q R+TR+T  KRK A KKEE  S   KAVKKVVAKKPK++TPAKPKQPKSI+
Subjt:  ILALQLKNSTAKGKLTKIKASYKLSEAG-KKDKKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAKKPKKTTPAKPKQPKSIR

Query:  SPAAKRAKKAV
        SPAAKRAKKAV
Subjt:  SPAAKRAKKAV

A0A6J1BSE6 histone H11.5e-7080.86Show/hide
Query:  MSSTGEVEVKVPAEDVPPAEVPAAEEPKVAEKPVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKIL
        MSSTGE +V+VP  DVPPAE PAAE+P  AEKPVKE+KPRTPREKKPRQ K ASHPPYFQMIKEAISSLNEK+GSSPYAIAKYMEEKHKAVLPANFRKIL
Subjt:  MSSTGEVEVKVPAEDVPPAEVPAAEEPKVAEKPVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKIL

Query:  ALQLKNSTAKGKLTKIKASYKLSEAGKKDKKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAKKPKKTTPAKPKQPKSIRSPA
        ALQLKNSTA+GKL KIKASYKLSEAGKKDK  SKV KA AEKK R  RSTR+     + AAKKEE A     A KKVVAKKPKK+TPAKPKQPKSIRSPA
Subjt:  ALQLKNSTAKGKLTKIKASYKLSEAGKKDKKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAKKPKKTTPAKPKQPKSIRSPA

Query:  AKRAKKAVA
        AKRAKK+ A
Subjt:  AKRAKKAVA

A0A6J1GFQ2 histone H14.1e-7684.69Show/hide
Query:  MSSTGEVEVKVPAEDVPPAEVPAAEEPKVAEKPVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKIL
        MSSTGE EVKVPAED P  EVP+AEE K AEKPV+EKK RTPREKKPRQ+KVASHPPYFQMI EAI+SLNEK+GSSPYAIAKYMEEKHK VLPANFRKIL
Subjt:  MSSTGEVEVKVPAEDVPPAEVPAAEEPKVAEKPVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKIL

Query:  ALQLKNSTAKGKLTKIKASYKLSEAGKKDKKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAKKPKKTTPAKPKQPKSIRSPA
        ALQLKNSTAKGKL KIKASY+LSEAGKKDKK SKVAKANAEKK +Q R+TR+TA KR     K+E ASKAAKA+KKVVAKKPK+TTPAKPKQPKSIRSPA
Subjt:  ALQLKNSTAKGKLTKIKASYKLSEAGKKDKKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAKKPKKTTPAKPKQPKSIRSPA

Query:  AKRAKKAVA
        AKRAKKAVA
Subjt:  AKRAKKAVA

A0A6J1IMR2 histone H11.7e-7785.65Show/hide
Query:  MSSTGEVEVKVPAEDVPPAEVPAAEEPKVAEKPVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKIL
        MSSTGE EVKVPAED P AEVP+AEEPK AEKPV+EKK RTPREKKPRQ+KVASHPPYFQMIKEAI+SLNEK+GSSPYAIAKYMEEKHK VLPANFRKIL
Subjt:  MSSTGEVEVKVPAEDVPPAEVPAAEEPKVAEKPVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKIL

Query:  ALQLKNSTAKGKLTKIKASYKLSEAGKKDKKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAKKPKKTTPAKPKQPKSIRSPA
        ALQLKNSTAKGKL KIKASY+LSEAGKKDKK SKVAKANAEK  +Q R+TR+TA KR     K+E ASK AKAVKKVVAKKPK+TTPAKPKQPKSIRSPA
Subjt:  ALQLKNSTAKGKLTKIKASYKLSEAGKKDKKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAKKPKKTTPAKPKQPKSIRSPA

Query:  AKRAKKAVA
        AKRAKKAVA
Subjt:  AKRAKKAVA

SwissProt top hitse value%identityAlignment
P08283 Histone H11.4e-1744.28Show/hide
Query:  EVKVPAEDVPPAEVPAAEEPKVAEKPVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNS
        E +VP ++ P AEV   ++ K   KP K  KPR P          ASHP Y +MIK+AI SL EK+GSS YAIAK++EEK K  LPANF+K+L   LK +
Subjt:  EVKVPAEDVPPAEVPAAEEPKVAEKPVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNS

Query:  TAKGKLTKIKASYKLSEAGKKDKKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAKKPKKTTPAKPKQPKSIRSPAAKRAKKA
         A GKL K+K S+KLS A KK       AK  A+ K   +   +  A  +  A  K + ASKA     K VA KPKK   AKPK   +   P A + K  
Subjt:  TAKGKLTKIKASYKLSEAGKKDKKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAKKPKKTTPAKPKQPKSIRSPAAKRAKKA

Query:  V
        V
Subjt:  V

P23444 Histone H11.6e-1642.86Show/hide
Query:  VPAEDVPPAEVPAAEEPKVAEKPVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAK
        V A    PA+ PAA  P       K KK   P+++        +H PY +M+ EAI+SL E+ GSS YAIAK++E+KHKA LP NFRK+L +QLK   A 
Subjt:  VPAEDVPPAEVPAAEEPKVAEKPVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAK

Query:  GKLTKIKASYKLSEAGK---KDKKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAK-KPKKTTPAKPKQPKSIRSPAAKRAKK
        GKLTK+K SYKLS A K   K K   K  K  A+K     +    T +K K A K +  A   A    K  AK K K    AKPK   +   P AK+A +
Subjt:  GKLTKIKASYKLSEAGK---KDKKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAK-KPKKTTPAKPKQPKSIRSPAAKRAKK

Query:  AVA
        A A
Subjt:  AVA

P27806 Histone H14.1e-1744.08Show/hide
Query:  VPAEDVPPAEVPAAEEPKV---AEKPVK-----EKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKILAL
        V A D+P  +V  A +  V   A KP K     + K  TP  KKPR T   +HP Y +M+ EAI++L E+ GSS  AI K++E+KHKA LPANFRKIL  
Subjt:  VPAEDVPPAEVPAAEEPKV---AEKPVK-----EKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKILAL

Query:  QLKNSTAKGKLTKIKASYKLSE--AGKKDKKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAV-KKVVAKKPKKTTPAKPK-QPKSIRS
        Q+K   A GKLTK+K SYKL++  A  K K  +K   A   K     + T + +  +KAAAK +  A   AKAV K   A KPK    AKPK +  + ++
Subjt:  QLKNSTAKGKLTKIKASYKLSE--AGKKDKKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAV-KKVVAKKPKKTTPAKPK-QPKSIRS

Query:  PAAKRAKKAVA
        PAA   KK  A
Subjt:  PAAKRAKKAVA

P40267 Histone H12.6e-4359.05Show/hide
Query:  MSSTGEVEVKVPAEDVPPAEVPAAEEPKVAEKPVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKIL
        M++ GEVE   P     P E    +E    + P  +KKPR P+EKKP+  K  +HPPYFQMIKEA+ +LNEK GSSPYA+AKYME+KHK  LPANFRKIL
Subjt:  MSSTGEVEVKVPAEDVPPAEVPAAEEPKVAEKPVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKIL

Query:  ALQLKNSTAKGKLTKIKASYKLSEAGKKD----KKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAKKPKKTTPAKPKQPKSI
         LQLKNS AKGKL KIKASYKLSEAGKK+        K+ KA+++KK R TR+T +TA+K+    KK    +KA    KKV AK+ +K+TPAK KQPKSI
Subjt:  ALQLKNSTAKGKLTKIKASYKLSEAGKKD----KKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAKKPKKTTPAKPKQPKSI

Query:  RSPAAKRAKK
        +SPAAKRAKK
Subjt:  RSPAAKRAKK

Q08864 Histone H1-I1.9e-1438.19Show/hide
Query:  PAEDVPPAEVPAAEEPKVAEKPVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKH-KAVLPANFRKILALQLKNSTAK
        PA + P A+ P A+ PK  + P   K+P+ P+EKKP+     +HPPY +M+K+AI++L E++GSS  A+ K++E K+ K +   NF K L+  +K     
Subjt:  PAEDVPPAEVPAAEEPKVAEKPVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKH-KAVLPANFRKILALQLKNSTAK

Query:  GKLTKIKASYKLSEA--GKKDKKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAKKPKKTTPAKPKQPKSIRSPAAKRAKKA
        GKL K+K S+KLSEA   K  K   K AKA+ E K +++ +    A   K     +E   +  K  K+ V K  KK TP K ++PK   +P +   KKA
Subjt:  GKLTKIKASYKLSEA--GKKDKKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAKKPKKTTPAKPKQPKSIRSPAAKRAKKA

Arabidopsis top hitse value%identityAlignment
AT1G06760.1 winged-helix DNA-binding transcription factor family protein6.8e-1540Show/hide
Query:  GEVEVKVPAEDVPPAEVPAAEEPKVAEKPVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKILALQL
        G      P  D    + PAA+  K   K VKE K +      P++  V+SHP Y +MIK+AI +L E+ GSS YAI K++EEK K  LP  FRK+L L L
Subjt:  GEVEVKVPAEDVPPAEVPAAEEPKVAEKPVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKILALQL

Query:  KNSTAKGKLTKIKASYKLSEAGKK--------------DKKVSKVAKANAEKKIRQTRSTRST-ASKRKAAAKKEETASKAAKAV---------KKVVAK
        K   A GKL K+KAS+KL  A  K               KK + VA   A++K+      + T A K K AA K+ TA   AK V         +K V  
Subjt:  KNSTAKGKLTKIKASYKLSEAGKK--------------DKKVSKVAKANAEKKIRQTRSTRST-ASKRKAAAKKEETASKAAKAV---------KKVVAK

Query:  KPK-KTTPAKPKQPKSIRSPAAKRAKKAVA
        KPK K  PAK  +   + SP    AKKAVA
Subjt:  KPK-KTTPAKPKQPKSIRSPAAKRAKKAVA

AT2G18050.1 histone H1-31.0e-2650Show/hide
Query:  RTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKASYKLSEAGK-----KDKKVSK
        +TP  KKPR+ K  +HPPYFQMIKEA+  L EK+GSSPYAIAK +EEKHK++LP +FRK L+LQLKNS AKGKL KI+ASYKLS+  K     +DKK  K
Subjt:  RTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKASYKLSEAGK-----KDKKVSK

Query:  VAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAKKPKKTTPAKPKQPKSIRSPAA-KRAKKAVA
          K   ++  ++TRS+ ST  K+  +  K+E   K  KA                 +QPKSI+S    K+A KA A
Subjt:  VAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAKKPKKTTPAKPKQPKSIRSPAA-KRAKKAVA

AT2G18050.2 histone H1-31.0e-1848.39Show/hide
Query:  MIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKASYKLSEAGK-----KDKKVSKVAKANAEKKIRQTRSTRSTAS
        MIKEA+  L EK+GSSPYAIAK +EEKHK++LP +FRK L+LQLKNS AKGKL KI+ASYKLS+  K     +DKK  K  K   ++  ++TRS+ ST  
Subjt:  MIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKASYKLSEAGK-----KDKKVSKVAKANAEKKIRQTRSTRSTAS

Query:  KRKAAAKKEETASKAAKAVKKVVAKKPKKTTPAKPKQPKSIRSPAA-KRAKKAVA
        K+  +  K+E   K  KA                 +QPKSI+S    K+A KA A
Subjt:  KRKAAAKKEETASKAAKAVKKVVAKKPKKTTPAKPKQPKSIRSPAA-KRAKKAVA

AT2G30620.1 winged-helix DNA-binding transcription factor family protein4.5e-1138.97Show/hide
Query:  SSTGEVEVKVPAEDVPPAEVPAAEEPKVAEKPVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKILA
        S   +  VK P E  P A+   +++   A+   K  K   P +KK      +SHP Y +MIK+AI +L E+ GSS YAI K++EEKHK+ LP  FRK+L 
Subjt:  SSTGEVEVKVPAEDVPPAEVPAAEEPKVAEKPVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKILA

Query:  LQLKNSTAKGKLTKIKASYKLSEA-----GKKDKKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAKKPKKTTPAKPKQPKSI
        + LK   A  KL K+KAS+K+  A      K    V K A   A+ K +   +     +K  A   K+  A   AKA  KV AK   K T AKPK     
Subjt:  LQLKNSTAKGKLTKIKASYKLSEA-----GKKDKKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAKKPKKTTPAKPKQPKSI

Query:  RSPAAKRAKKAVA
        +S AA    KAVA
Subjt:  RSPAAKRAKKAVA

AT2G30620.2 winged-helix DNA-binding transcription factor family protein3.5e-1139.89Show/hide
Query:  SSTGEVEVKVPAEDVPPAEVPAAEEPKVAEKPVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKILA
        S   +  VK P E  P A+   +++   A+   K  K   P +KK      +SHP Y +MIK+AI +L E+ GSS YAI K++EEKHK+ LP  FRK+L 
Subjt:  SSTGEVEVKVPAEDVPPAEVPAAEEPKVAEKPVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKILA

Query:  LQLKNSTAKGKLTKIKASYKLSEA-----GKKDKKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAKKPKK
        + LK   A  KL K+KAS+K+  A      K    V K A   A+ K  +T STR++  K+ AA  K+   +K A A K V  K P K
Subjt:  LQLKNSTAKGKLTKIKASYKLSEA-----GKKDKKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAKKPKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCGACTGGCGAAGTTGAAGTGAAAGTTCCGGCGGAAGATGTGCCTCCGGCGGAGGTTCCGGCTGCAGAGGAGCCGAAGGTTGCTGAGAAGCCGGTGAAGGAGAA
GAAACCTAGGACTCCGAGGGAGAAGAAGCCCAGGCAGACTAAAGTTGCTTCGCATCCACCGTATTTTCAGATGATCAAGGAAGCAATCTCGTCTCTAAACGAGAAGCATG
GATCGAGTCCGTACGCCATAGCCAAATACATGGAGGAGAAACACAAGGCGGTTCTTCCAGCGAATTTCAGGAAAATCTTGGCTCTCCAATTGAAGAATTCCACCGCAAAA
GGAAAATTAACGAAGATCAAGGCTTCGTATAAGCTATCCGAAGCGGGAAAGAAAGACAAGAAAGTATCAAAGGTCGCAAAAGCGAACGCAGAGAAGAAGATCAGACAAAC
AAGAAGTACGAGAAGTACTGCATCGAAGAGGAAGGCCGCGGCGAAGAAGGAGGAGACGGCAAGTAAGGCGGCGAAGGCGGTGAAGAAGGTGGTTGCAAAGAAACCGAAGA
AAACTACTCCGGCGAAGCCAAAACAGCCGAAATCGATAAGGTCCCCTGCTGCAAAGAGGGCTAAGAAAGCGGTTGCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGTCGACTGGCGAAGTTGAAGTGAAAGTTCCGGCGGAAGATGTGCCTCCGGCGGAGGTTCCGGCTGCAGAGGAGCCGAAGGTTGCTGAGAAGCCGGTGAAGGAGAA
GAAACCTAGGACTCCGAGGGAGAAGAAGCCCAGGCAGACTAAAGTTGCTTCGCATCCACCGTATTTTCAGATGATCAAGGAAGCAATCTCGTCTCTAAACGAGAAGCATG
GATCGAGTCCGTACGCCATAGCCAAATACATGGAGGAGAAACACAAGGCGGTTCTTCCAGCGAATTTCAGGAAAATCTTGGCTCTCCAATTGAAGAATTCCACCGCAAAA
GGAAAATTAACGAAGATCAAGGCTTCGTATAAGCTATCCGAAGCGGGAAAGAAAGACAAGAAAGTATCAAAGGTCGCAAAAGCGAACGCAGAGAAGAAGATCAGACAAAC
AAGAAGTACGAGAAGTACTGCATCGAAGAGGAAGGCCGCGGCGAAGAAGGAGGAGACGGCAAGTAAGGCGGCGAAGGCGGTGAAGAAGGTGGTTGCAAAGAAACCGAAGA
AAACTACTCCGGCGAAGCCAAAACAGCCGAAATCGATAAGGTCCCCTGCTGCAAAGAGGGCTAAGAAAGCGGTTGCGTGA
Protein sequenceShow/hide protein sequence
MSSTGEVEVKVPAEDVPPAEVPAAEEPKVAEKPVKEKKPRTPREKKPRQTKVASHPPYFQMIKEAISSLNEKHGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAK
GKLTKIKASYKLSEAGKKDKKVSKVAKANAEKKIRQTRSTRSTASKRKAAAKKEETASKAAKAVKKVVAKKPKKTTPAKPKQPKSIRSPAAKRAKKAVA