CuGenDBv2

Gene ID	Lag0013486
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Transmembrane protein
Genome location	chr1:50634379..50634924
RNA-Seq Expression	Lag0013486
Synteny	Lag0013486
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6603917.1 hypothetical protein SDJN03_04526, partial [Cucurbita argyrosperma subsp. sororia]

1.5e-84

88.95

Show/hide

Query:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATDTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP
        MEATSLH+FLASKPPLLTI+PH+FS  SQNQ+FFLSLRHQQPLRIKPINATDTD GDSAPPQVPP ITPPETV+VRFRKRSRRRSKQESEDG AMGN R 
Subjt:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATDTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP

Query:  RKAPVETVSDKPKKWEDMSMAEKATDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG
        RKAPVE  S KPKKWE+M +AEKAT+LYMGEKGLLFWLNKFAYASIFIMIGGWI+FRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  RKAPVETVSDKPKKWEDMSMAEKATDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG

XP_022133044.1 uncharacterized protein LOC111005736 [Momordica charantia]

1.7e-80

83.98

Show/hide

Query:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATDTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP
        ME T+LHQ LASKPPLLTINPH FS ISQNQ+ FLSLR +Q L+I PINA   DGGDS PPQVP  +TPPETVEVRFRKRSRRRSKQESEDG A GNGRP
Subjt:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATDTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP

Query:  RKAPVETVSDKPKKWEDMSMAEKATDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG
        RKAPVE  S+K KKWEDMS+AEKAT+LYMGEKGLLFWLNKFAYASIF+MIGGWI+FRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  RKAPVETVSDKPKKWEDMSMAEKATDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG

XP_022950633.1 uncharacterized protein LOC111453672 [Cucurbita moschata]

9.5e-84

88.4

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Query:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATDTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP
        MEATSLH+FLASKPPLLTI+PH+FS  SQNQ+FFLSLRHQQPLRIKPINATDTD GDSAPPQVPP ITPPETV+VRFRKRSRRRSKQESEDG AMGN   
Subjt:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATDTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP

Query:  RKAPVETVSDKPKKWEDMSMAEKATDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG
        RKAPVE  S KPKKWE+M +AEKAT+LYMGEKGLLFWLNKFAYASIFIMIGGWI+FRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  RKAPVETVSDKPKKWEDMSMAEKATDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG

XP_022979054.1 uncharacterized protein LOC111478809 [Cucurbita maxima]

1.6e-83

87.85

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Query:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATDTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP
        ME+TSLH+FLAS+PPLLTI PH+FS  SQNQ+FFLSLRHQQPLRIKPINATDTD GDSAPPQVPP ITPPETV+VRFRKRSRRRSKQESEDG AMGN R 
Subjt:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATDTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP

Query:  RKAPVETVSDKPKKWEDMSMAEKATDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG
        RKAPVE  S KPKKWE+M +AEKAT+LYMGEKGLLFWLNKFAYASIFIMIGGWI+FRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  RKAPVETVSDKPKKWEDMSMAEKATDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG

XP_023544554.1 uncharacterized protein LOC111804097 [Cucurbita pepo subsp. pepo]

1.5e-84

88.95

Show/hide

Query:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATDTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP
        MEATSLH+FLASKPPLLTI+PH+FS  SQNQ+FFLSLRHQQPLRIKPINATDTD GDSAPPQVPP ITPPETV+VRFRKRSRRRSKQESEDG AMGN R 
Subjt:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATDTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP

Query:  RKAPVETVSDKPKKWEDMSMAEKATDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG
        RKAPVE  S KPKKWE+M +AEKAT+LYMGEKGLLFWLNKFAYASIFIMIGGWI+FRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  RKAPVETVSDKPKKWEDMSMAEKATDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B215 uncharacterized protein LOC103485119

1.7e-78

83.98

Show/hide

Query:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATDTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP
        ME+ SLHQ LASKPPL TINP +FS  SQ QIFF SLR Q+PLRIKPINATDTD GD+APPQVPPEITPPETVEVRFRKRSRRRSK+E EDG AMGNGRP
Subjt:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATDTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP

Query:  RKAPVETVSDKPKKWEDMSMAEKATDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG
        RKA VE  S K KKWE+MS+ EKA +LYMGEKGLLFWLNKFAYASIFIMIGGWI+FRFVGPSLNLYQLDTPPLSPTS+FKG
Subjt:  RKAPVETVSDKPKKWEDMSMAEKATDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG

A0A5A7SKL6 Putative transmembrane protein

1.7e-78

83.98

Show/hide

Query:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATDTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP
        ME+ SLHQ LASKPPL TINP +FS  SQ QIFF SLR Q+PLRIKPINATDTD GD+APPQVPPEITPPETVEVRFRKRSRRRSK+E EDG AMGNGRP
Subjt:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATDTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP

Query:  RKAPVETVSDKPKKWEDMSMAEKATDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG
        RKA VE  S K KKWE+MS+ EKA +LYMGEKGLLFWLNKFAYASIFIMIGGWI+FRFVGPSLNLYQLDTPPLSPTS+FKG
Subjt:  RKAPVETVSDKPKKWEDMSMAEKATDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG

A0A6J1BUU3 uncharacterized protein LOC111005736

8.1e-81

83.98

Show/hide

Query:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATDTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP
        ME T+LHQ LASKPPLLTINPH FS ISQNQ+ FLSLR +Q L+I PINA   DGGDS PPQVP  +TPPETVEVRFRKRSRRRSKQESEDG A GNGRP
Subjt:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATDTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP

Query:  RKAPVETVSDKPKKWEDMSMAEKATDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG
        RKAPVE  S+K KKWEDMS+AEKAT+LYMGEKGLLFWLNKFAYASIF+MIGGWI+FRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  RKAPVETVSDKPKKWEDMSMAEKATDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG

A0A6J1GFF1 uncharacterized protein LOC111453672

4.6e-84

88.4

Show/hide

Query:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATDTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP
        MEATSLH+FLASKPPLLTI+PH+FS  SQNQ+FFLSLRHQQPLRIKPINATDTD GDSAPPQVPP ITPPETV+VRFRKRSRRRSKQESEDG AMGN   
Subjt:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATDTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP

Query:  RKAPVETVSDKPKKWEDMSMAEKATDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG
        RKAPVE  S KPKKWE+M +AEKAT+LYMGEKGLLFWLNKFAYASIFIMIGGWI+FRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  RKAPVETVSDKPKKWEDMSMAEKATDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG

A0A6J1IVM3 uncharacterized protein LOC111478809

7.8e-84

87.85

Show/hide

Query:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATDTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP
        ME+TSLH+FLAS+PPLLTI PH+FS  SQNQ+FFLSLRHQQPLRIKPINATDTD GDSAPPQVPP ITPPETV+VRFRKRSRRRSKQESEDG AMGN R 
Subjt:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATDTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP

Query:  RKAPVETVSDKPKKWEDMSMAEKATDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG
        RKAPVE  S KPKKWE+M +AEKAT+LYMGEKGLLFWLNKFAYASIFIMIGGWI+FRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  RKAPVETVSDKPKKWEDMSMAEKATDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G17972.1 unknown protein

3.4e-31

46.63

Show/hide

Query:  SLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATDTDGGDSAPPQVPPEITPP-ETVEVRFRKRSRRRSKQESEDGPAMGNGRPRKA
        SLH FLA    ++ +    ++       F L   +++ L I  +N+    GGD        +IT P + VE+RF++ SRR+ +   E+G   G G+  K 
Subjt:  SLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATDTDGGDSAPPQVPPEITPP-ETVEVRFRKRSRRRSKQESEDGPAMGNGRPRKA

Query:  PVETVSDKPKKWEDMSMAEKATDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG
          ETV    K WE+M++ EKA +LY+GEKGLLFWLNK AYASI+I+IGGWI FRFVGP+ NLYQLDTPPL P +I KG
Subjt:  PVETVSDKPKKWEDMSMAEKATDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG

Sequences

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CDS sequence

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ATGGAAGCAACCAGTCTCCACCAATTTCTCGCCTCTAAACCACCGCTCTTAACCATTAATCCACATAGATTCTCGGCTATATCTCAGAATCAGATCTTCTTCCTATCTCT
ACGCCATCAACAGCCTCTCAGAATCAAACCGATCAACGCCACCGACACCGACGGCGGCGACAGCGCGCCACCGCAGGTTCCGCCGGAAATAACGCCTCCGGAGACGGTTG
AAGTTCGGTTTCGGAAGAGGTCGAGAAGACGATCCAAGCAGGAGAGCGAGGATGGACCGGCGATGGGGAATGGACGGCCGAGGAAGGCGCCGGTGGAGACTGTTTCCGAT
AAGCCGAAGAAATGGGAGGACATGAGCATGGCGGAGAAGGCAACGGATCTGTATATGGGAGAGAAGGGTTTATTGTTTTGGCTCAACAAGTTTGCTTATGCTTCCATTTT
TATCATGATTGGAGGTTGGATTCTGTTCCGATTTGTTGGTCCTTCGCTCAATCTTTACCAGTTGGATACTCCACCATTATCTCCGACTTCCATTTTCAAGGGCTAG

mRNA sequence

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Protein sequence

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MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATDTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRPRKAPVETVSD
KPKKWEDMSMAEKATDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG

Lag0013486 (gene) of Sponge gourd (AG-4) v1 genome