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Lag0013490 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0013490
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransducin/WD40 repeat-like superfamily protein
Genome locationchr1:50659788..50660183
RNA-Seq ExpressionLag0013490
SyntenyLag0013490
Gene Ontology termsGO:0009626 - plant-type hypersensitive response (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025678.1 Transducin/WD40 repeat-like superfamily protein [Cucumis melo var. makuwa]4.0e-3172.5Show/hide
Query:  MAERSGRRIPRKTK-AAHLCIPKLRA-DATKNTKAPSPMTLLERLREAVFRFIMLCALSKATNHHHHHPAEAGFQDD-VVRRRHSYQGADHHHSEAVADC
        MAE+S RR+PRK K  A+LC+ K R+ DA KN K PS MTL ERLREAVFRFIMLCALSKATN  HH  A A FQDD VVRRRHSY   DHHHSEAVADC
Subjt:  MAERSGRRIPRKTK-AAHLCIPKLRA-DATKNTKAPSPMTLLERLREAVFRFIMLCALSKATNHHHHHPAEAGFQDD-VVRRRHSYQGADHHHSEAVADC

Query:  IEFIKKKAYSDD-DIIHDGG
        IEFIK KAYSDD ++I  GG
Subjt:  IEFIKKKAYSDD-DIIHDGG

KAG6603914.1 hypothetical protein SDJN03_04523, partial [Cucurbita argyrosperma subsp. sororia]2.4e-3670.77Show/hide
Query:  MAERSGRRIPRKTKAAHLCIPKLRADATKNTKAPSPMTLLERLREAVFRFIMLCALSKATNHHHHHPAEAGFQDDVVRRRHSYQGADHHHSEAVADCIEF
        MAE++ RR+P K         KLR D  KN+KAP  MTL ERLREAVFRFIMLCALSKATN   HH A A FQDDVVRRR SYQ  DHHHSEAVADCIEF
Subjt:  MAERSGRRIPRKTKAAHLCIPKLRADATKNTKAPSPMTLLERLREAVFRFIMLCALSKATNHHHHHPAEAGFQDDVVRRRHSYQGADHHHSEAVADCIEF

Query:  IKKKAYSDDDIIHDGGSMDADADVAVPVPV
        IKKKAYSDD II D GS+DAD D+AV VP+
Subjt:  IKKKAYSDDDIIHDGGSMDADADVAVPVPV

KGN49339.2 hypothetical protein Csa_003207 [Cucumis sativus]1.1e-3672.26Show/hide
Query:  MAERSGRRIPRKTK-AAHLCIPKLRA-DATKNTKAPSPMTLLERLREAVFRFIMLCALSKATNHHHHHPAEAGFQDD-VVRRRHSYQGADHHHSEAVADC
        MAE+S RR+PRK K   +LC+ K R+ DA K TK PSPMTL ERLREAVFRFIMLCALSKATN  HH  A A FQDD VVRRRHSY   DHHHSEAVADC
Subjt:  MAERSGRRIPRKTK-AAHLCIPKLRA-DATKNTKAPSPMTLLERLREAVFRFIMLCALSKATNHHHHHPAEAGFQDD-VVRRRHSYQGADHHHSEAVADC

Query:  IEFIKKKAYSDDDIIHDGGSM-DADAD--VAVPVPVR
        IEFIK KAYSDD++I D GS+ DAD D  V+VPVPVR
Subjt:  IEFIKKKAYSDDDIIHDGGSM-DADAD--VAVPVPVR

MBA0741916.1 hypothetical protein [Gossypium gossypioides]1.6e-1950.39Show/hide
Query:  ERSGRRIPRKTKAAHLCIPKLRADATKNTKAPSPMTLLERLREAVFRFIMLCALSKATNHHHHHPAEAGFQDDVVRRRHSYQGADHHHSEAVADCIEFIK
        E+  R  P+  K++ LC+P  +++  KN K  SP+TLLER REAVFR IML ALSKA++HHHHH         V RR   Y  AD HH+EAVADCIEFIK
Subjt:  ERSGRRIPRKTKAAHLCIPKLRADATKNTKAPSPMTLLERLREAVFRFIMLCALSKATNHHHHHPAEAGFQDDVVRRRHSYQGADHHHSEAVADCIEFIK

Query:  KKAYSDDDIIHDGGSMD-ADADVAVPVPV
        KK  S  +      +MD A +++ +PVPV
Subjt:  KKAYSDDDIIHDGGSMD-ADADVAVPVPV

TKS00259.1 hypothetical protein D5086_0000184720 [Populus alba]7.0e-2051.15Show/hide
Query:  GRRIPRKTKAAHLCIPKLRADATKNTK--APSPMTLLERLREAVFRFIMLCALSKATNHHHHHPAEAGFQDDVVRRRHSYQGADHHHSEAVADCIEFIKK
        G   P++ K +HLCIP+LR +AT   K    SPMTLLER R+AVFR +ML ALSKAT    H+ A +     V+++R SY  AD HHSEAVADCIEFIKK
Subjt:  GRRIPRKTKAAHLCIPKLRADATKNTK--APSPMTLLERLREAVFRFIMLCALSKATNHHHHHPAEAGFQDDVVRRRHSYQGADHHHSEAVADCIEFIKK

Query:  KAYSDDDIIH----DGGSMDADADVAVPVPV
         + +D + I+       S DA  ++A+PVPV
Subjt:  KAYSDDDIIH----DGGSMDADADVAVPVPV

TrEMBL top hitse value%identityAlignment
A0A0A0KGN3 Uncharacterized protein5.2e-3772.26Show/hide
Query:  MAERSGRRIPRKTK-AAHLCIPKLRA-DATKNTKAPSPMTLLERLREAVFRFIMLCALSKATNHHHHHPAEAGFQDD-VVRRRHSYQGADHHHSEAVADC
        MAE+S RR+PRK K   +LC+ K R+ DA K TK PSPMTL ERLREAVFRFIMLCALSKATN  HH  A A FQDD VVRRRHSY   DHHHSEAVADC
Subjt:  MAERSGRRIPRKTK-AAHLCIPKLRA-DATKNTKAPSPMTLLERLREAVFRFIMLCALSKATNHHHHHPAEAGFQDD-VVRRRHSYQGADHHHSEAVADC

Query:  IEFIKKKAYSDDDIIHDGGSM-DADAD--VAVPVPVR
        IEFIK KAYSDD++I D GS+ DAD D  V+VPVPVR
Subjt:  IEFIKKKAYSDDDIIHDGGSM-DADAD--VAVPVPVR

A0A4U5PT50 Uncharacterized protein3.4e-2051.15Show/hide
Query:  GRRIPRKTKAAHLCIPKLRADATKNTK--APSPMTLLERLREAVFRFIMLCALSKATNHHHHHPAEAGFQDDVVRRRHSYQGADHHHSEAVADCIEFIKK
        G   P++ K +HLCIP+LR +AT   K    SPMTLLER R+AVFR +ML ALSKAT    H+ A +     V+++R SY  AD HHSEAVADCIEFIKK
Subjt:  GRRIPRKTKAAHLCIPKLRADATKNTK--APSPMTLLERLREAVFRFIMLCALSKATNHHHHHPAEAGFQDDVVRRRHSYQGADHHHSEAVADCIEFIKK

Query:  KAYSDDDIIH----DGGSMDADADVAVPVPV
         + +D + I+       S DA  ++A+PVPV
Subjt:  KAYSDDDIIH----DGGSMDADADVAVPVPV

A0A5A7SHP0 Transducin/WD40 repeat-like superfamily protein1.9e-3172.5Show/hide
Query:  MAERSGRRIPRKTK-AAHLCIPKLRA-DATKNTKAPSPMTLLERLREAVFRFIMLCALSKATNHHHHHPAEAGFQDD-VVRRRHSYQGADHHHSEAVADC
        MAE+S RR+PRK K  A+LC+ K R+ DA KN K PS MTL ERLREAVFRFIMLCALSKATN  HH  A A FQDD VVRRRHSY   DHHHSEAVADC
Subjt:  MAERSGRRIPRKTK-AAHLCIPKLRA-DATKNTKAPSPMTLLERLREAVFRFIMLCALSKATNHHHHHPAEAGFQDD-VVRRRHSYQGADHHHSEAVADC

Query:  IEFIKKKAYSDD-DIIHDGG
        IEFIK KAYSDD ++I  GG
Subjt:  IEFIKKKAYSDD-DIIHDGG

A0A5D2NDI0 Uncharacterized protein2.9e-1950.39Show/hide
Query:  ERSGRRIPRKTKAAHLCIPKLRADATKNTKAPSPMTLLERLREAVFRFIMLCALSKATNHHHHHPAEAGFQDDVVRRRHSYQGADHHHSEAVADCIEFIK
        E+  R  P+  K++ LC+P  +++  KN K  SP+TLLER REAVFR IML ALSKA++HHHHH + +      V RR  Y  AD HH+EAVADCIEFIK
Subjt:  ERSGRRIPRKTKAAHLCIPKLRADATKNTKAPSPMTLLERLREAVFRFIMLCALSKATNHHHHHPAEAGFQDDVVRRRHSYQGADHHHSEAVADCIEFIK

Query:  KKAYSDDDIIHDGGSMD-ADADVAVPVPV
        KK  S  +      +MD A +++ +PVPV
Subjt:  KKAYSDDDIIHDGGSMD-ADADVAVPVPV

A0A7J9C0I1 Uncharacterized protein7.6e-2050.39Show/hide
Query:  ERSGRRIPRKTKAAHLCIPKLRADATKNTKAPSPMTLLERLREAVFRFIMLCALSKATNHHHHHPAEAGFQDDVVRRRHSYQGADHHHSEAVADCIEFIK
        E+  R  P+  K++ LC+P  +++  KN K  SP+TLLER REAVFR IML ALSKA++HHHHH         V RR   Y  AD HH+EAVADCIEFIK
Subjt:  ERSGRRIPRKTKAAHLCIPKLRADATKNTKAPSPMTLLERLREAVFRFIMLCALSKATNHHHHHPAEAGFQDDVVRRRHSYQGADHHHSEAVADCIEFIK

Query:  KKAYSDDDIIHDGGSMD-ADADVAVPVPV
        KK  S  +      +MD A +++ +PVPV
Subjt:  KKAYSDDDIIHDGGSMD-ADADVAVPVPV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGAAAGATCAGGCAGAAGAATCCCCAGAAAGACGAAGGCGGCCCATCTCTGCATCCCAAAGCTCAGAGCCGACGCCACGAAGAACACCAAGGCCCCGTCGCCGAT
GACTCTGCTCGAGCGCCTCCGTGAGGCCGTCTTTCGTTTCATAATGCTATGCGCTCTCTCGAAGGCCACAAATCATCATCATCATCATCCCGCCGAAGCTGGTTTCCAAG
ACGACGTCGTTAGGCGGCGGCACTCGTACCAAGGCGCCGACCACCACCACAGCGAAGCCGTCGCCGATTGCATCGAGTTCATCAAGAAGAAGGCGTATTCCGACGACGAT
ATCATTCACGACGGTGGATCGATGGACGCCGATGCTGACGTGGCTGTGCCGGTGCCGGTTAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGAAAGATCAGGCAGAAGAATCCCCAGAAAGACGAAGGCGGCCCATCTCTGCATCCCAAAGCTCAGAGCCGACGCCACGAAGAACACCAAGGCCCCGTCGCCGAT
GACTCTGCTCGAGCGCCTCCGTGAGGCCGTCTTTCGTTTCATAATGCTATGCGCTCTCTCGAAGGCCACAAATCATCATCATCATCATCCCGCCGAAGCTGGTTTCCAAG
ACGACGTCGTTAGGCGGCGGCACTCGTACCAAGGCGCCGACCACCACCACAGCGAAGCCGTCGCCGATTGCATCGAGTTCATCAAGAAGAAGGCGTATTCCGACGACGAT
ATCATTCACGACGGTGGATCGATGGACGCCGATGCTGACGTGGCTGTGCCGGTGCCGGTTAGGTAA
Protein sequenceShow/hide protein sequence
MAERSGRRIPRKTKAAHLCIPKLRADATKNTKAPSPMTLLERLREAVFRFIMLCALSKATNHHHHHPAEAGFQDDVVRRRHSYQGADHHHSEAVADCIEFIKKKAYSDDD
IIHDGGSMDADADVAVPVPVR