; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0013498 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0013498
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRING-type domain-containing protein
Genome locationchr1:50763712..50764278
RNA-Seq ExpressionLag0013498
SyntenyLag0013498
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025673.1 RING-H2 finger protein ATL72-like [Cucumis melo var. makuwa]9.6e-7981.15Show/hide
Query:  MNSVQDLGYSYRRLLKD-SLFEHPFGGRERIVTISVTSLIVAMFVFSLLISLFTCFRRQLNPSPSKPLISTSSIQ-LTTIPVYIYGDSSSN-PPSYCFTS
        MNSV DLGYS RRLLKD SLFE PFG RERIVTI  TS I A+FV SL ISLFTCFRRQLN   SKPL ST S Q LTT+PVYIYGDSSSN P SYCFT 
Subjt:  MNSVQDLGYSYRRLLKD-SLFEHPFGGRERIVTISVTSLIVAMFVFSLLISLFTCFRRQLNPSPSKPLISTSSIQ-LTTIPVYIYGDSSSN-PPSYCFTS

Query:  SFESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRDRIIEDIGTMRRPVCTNYWARNPAFLLAFGLGSNIPLPSQL
        SFESRNCVICLAEFE GDELRVLPNCKH FHKGCIDQWL LRSLLCPLCR+  I++I TMRRP+C+NYWARNPAF+LAFGLGSN PLPSQL
Subjt:  SFESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRDRIIEDIGTMRRPVCTNYWARNPAFLLAFGLGSNIPLPSQL

XP_008440820.1 PREDICTED: RING-H2 finger protein ATL72-like [Cucumis melo]9.6e-7981.15Show/hide
Query:  MNSVQDLGYSYRRLLKD-SLFEHPFGGRERIVTISVTSLIVAMFVFSLLISLFTCFRRQLNPSPSKPLISTSSIQ-LTTIPVYIYGDSSSN-PPSYCFTS
        MNSV DLGYS RRLLKD SLFE PFG RERIVTI  TS I A+FV SL ISLFTCFRRQLN   SKPL ST S Q LTT+PVYIYGDSSSN P SYCFT 
Subjt:  MNSVQDLGYSYRRLLKD-SLFEHPFGGRERIVTISVTSLIVAMFVFSLLISLFTCFRRQLNPSPSKPLISTSSIQ-LTTIPVYIYGDSSSN-PPSYCFTS

Query:  SFESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRDRIIEDIGTMRRPVCTNYWARNPAFLLAFGLGSNIPLPSQL
        SFESRNCVICLAEFE GDELRVLPNCKH FHKGCIDQWL LRSLLCPLCR+  I++I TMRRP+C+NYWARNPAF+LAFGLGSN PLPSQL
Subjt:  SFESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRDRIIEDIGTMRRPVCTNYWARNPAFLLAFGLGSNIPLPSQL

XP_011658497.1 E3 ubiquitin-protein ligase RHA2B [Cucumis sativus]1.9e-7981.05Show/hide
Query:  MNSVQDLGYSYRRLLKDSLFEHPFGGRERIVTISVTSLIVAMFVFSLLISLFTCFRRQLNPSPSKPLISTSSIQ-LTTIPVYIYGDSSSN-PPSYCFTSS
        MNSV DLGYS RRLLKDSLFE PFG RERIVTI  TS I A+FV SL ISLFTCFRRQLN   SKPL ST S Q LTT+PVYIYGDSSSN P SYCFT S
Subjt:  MNSVQDLGYSYRRLLKDSLFEHPFGGRERIVTISVTSLIVAMFVFSLLISLFTCFRRQLNPSPSKPLISTSSIQ-LTTIPVYIYGDSSSN-PPSYCFTSS

Query:  FESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRDRIIEDIGTMRRPVCTNYWARNPAFLLAFGLGSNIPLPSQL
        FESR CVICLAEFE GDELRVLPNCKH FHKGCIDQWL LRSLLCPLCR+  I++I TMRRPVC+NYW+RNPAF+LAFGLGSN PLPSQL
Subjt:  FESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRDRIIEDIGTMRRPVCTNYWARNPAFLLAFGLGSNIPLPSQL

XP_022133218.1 RING-H2 finger protein ATL79-like [Momordica charantia]5.4e-7475.26Show/hide
Query:  MNSVQDLGYSYRRLLKDSLFEHPFGGRERIVTISVTSLIVAMFVFSLLISLFTCFRRQLNP-SPSKPLISTSSIQLTTIPVYIYGDSSSNPPSYCFTSSF
        MNS+Q+LG SYRRLLKDS+FEHPFG RER +TI VTSLIVA+FVFSL IS  TCFRR++NP S SKP  S+ S QLTT+PVYIYGDSS NP      SSF
Subjt:  MNSVQDLGYSYRRLLKDSLFEHPFGGRERIVTISVTSLIVAMFVFSLLISLFTCFRRQLNP-SPSKPLISTSSIQLTTIPVYIYGDSSSNPPSYCFTSSF

Query:  ESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRD-RIIEDIGTMRRPVCTNYWARNPAFLLAFGLGSNIPLPSQL
        ES+NCVICLAEFE+GDE+RVLPNC+HAFHKGCIDQWL L SLLCPLCRD    E+I TMRRP CTN WARNPAF+LAFGLGSN+P+PSQ+
Subjt:  ESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRD-RIIEDIGTMRRPVCTNYWARNPAFLLAFGLGSNIPLPSQL

XP_038881295.1 RING-H2 finger protein ATL79-like [Benincasa hispida]3.1e-8583.07Show/hide
Query:  MNSVQDLGYSYRRLLKDSLFEHPFGGRERIVTISVTSLIVAMFVFSLLISLFTCFRRQLNPSPSKPLISTSSIQLTTIPVYIYGDSSSNP-PSYCFTSSF
        MNSV  LGYSYRRLLKDSLFEHPFG RERIVTI  TS+I AMFV SL ISLFTCFR QLN   SKP  STSS QLTT+PVYIYGD SS+P  SYCFTSSF
Subjt:  MNSVQDLGYSYRRLLKDSLFEHPFGGRERIVTISVTSLIVAMFVFSLLISLFTCFRRQLNPSPSKPLISTSSIQLTTIPVYIYGDSSSNP-PSYCFTSSF

Query:  ESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRDRIIEDIGTMRRPVCTNYWARNPAFLLAFGLGSNIPLPSQL
        E RNCVICLAEF++GDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRD   E+IGTMRRP+C+NYWARNPAF+LAFGLGSN+PLPSQL
Subjt:  ESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRDRIIEDIGTMRRPVCTNYWARNPAFLLAFGLGSNIPLPSQL

TrEMBL top hitse value%identityAlignment
A0A0A0KKP7 RING-type domain-containing protein9.3e-8081.05Show/hide
Query:  MNSVQDLGYSYRRLLKDSLFEHPFGGRERIVTISVTSLIVAMFVFSLLISLFTCFRRQLNPSPSKPLISTSSIQ-LTTIPVYIYGDSSSN-PPSYCFTSS
        MNSV DLGYS RRLLKDSLFE PFG RERIVTI  TS I A+FV SL ISLFTCFRRQLN   SKPL ST S Q LTT+PVYIYGDSSSN P SYCFT S
Subjt:  MNSVQDLGYSYRRLLKDSLFEHPFGGRERIVTISVTSLIVAMFVFSLLISLFTCFRRQLNPSPSKPLISTSSIQ-LTTIPVYIYGDSSSN-PPSYCFTSS

Query:  FESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRDRIIEDIGTMRRPVCTNYWARNPAFLLAFGLGSNIPLPSQL
        FESR CVICLAEFE GDELRVLPNCKH FHKGCIDQWL LRSLLCPLCR+  I++I TMRRPVC+NYW+RNPAF+LAFGLGSN PLPSQL
Subjt:  FESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRDRIIEDIGTMRRPVCTNYWARNPAFLLAFGLGSNIPLPSQL

A0A1S3B2S4 RING-H2 finger protein ATL72-like4.6e-7981.15Show/hide
Query:  MNSVQDLGYSYRRLLKD-SLFEHPFGGRERIVTISVTSLIVAMFVFSLLISLFTCFRRQLNPSPSKPLISTSSIQ-LTTIPVYIYGDSSSN-PPSYCFTS
        MNSV DLGYS RRLLKD SLFE PFG RERIVTI  TS I A+FV SL ISLFTCFRRQLN   SKPL ST S Q LTT+PVYIYGDSSSN P SYCFT 
Subjt:  MNSVQDLGYSYRRLLKD-SLFEHPFGGRERIVTISVTSLIVAMFVFSLLISLFTCFRRQLNPSPSKPLISTSSIQ-LTTIPVYIYGDSSSN-PPSYCFTS

Query:  SFESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRDRIIEDIGTMRRPVCTNYWARNPAFLLAFGLGSNIPLPSQL
        SFESRNCVICLAEFE GDELRVLPNCKH FHKGCIDQWL LRSLLCPLCR+  I++I TMRRP+C+NYWARNPAF+LAFGLGSN PLPSQL
Subjt:  SFESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRDRIIEDIGTMRRPVCTNYWARNPAFLLAFGLGSNIPLPSQL

A0A5D3CLV8 RING-H2 finger protein ATL72-like4.6e-7981.15Show/hide
Query:  MNSVQDLGYSYRRLLKD-SLFEHPFGGRERIVTISVTSLIVAMFVFSLLISLFTCFRRQLNPSPSKPLISTSSIQ-LTTIPVYIYGDSSSN-PPSYCFTS
        MNSV DLGYS RRLLKD SLFE PFG RERIVTI  TS I A+FV SL ISLFTCFRRQLN   SKPL ST S Q LTT+PVYIYGDSSSN P SYCFT 
Subjt:  MNSVQDLGYSYRRLLKD-SLFEHPFGGRERIVTISVTSLIVAMFVFSLLISLFTCFRRQLNPSPSKPLISTSSIQ-LTTIPVYIYGDSSSN-PPSYCFTS

Query:  SFESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRDRIIEDIGTMRRPVCTNYWARNPAFLLAFGLGSNIPLPSQL
        SFESRNCVICLAEFE GDELRVLPNCKH FHKGCIDQWL LRSLLCPLCR+  I++I TMRRP+C+NYWARNPAF+LAFGLGSN PLPSQL
Subjt:  SFESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRDRIIEDIGTMRRPVCTNYWARNPAFLLAFGLGSNIPLPSQL

A0A6J1BYH3 RING-H2 finger protein ATL79-like2.6e-7475.26Show/hide
Query:  MNSVQDLGYSYRRLLKDSLFEHPFGGRERIVTISVTSLIVAMFVFSLLISLFTCFRRQLNP-SPSKPLISTSSIQLTTIPVYIYGDSSSNPPSYCFTSSF
        MNS+Q+LG SYRRLLKDS+FEHPFG RER +TI VTSLIVA+FVFSL IS  TCFRR++NP S SKP  S+ S QLTT+PVYIYGDSS NP      SSF
Subjt:  MNSVQDLGYSYRRLLKDSLFEHPFGGRERIVTISVTSLIVAMFVFSLLISLFTCFRRQLNP-SPSKPLISTSSIQLTTIPVYIYGDSSSNPPSYCFTSSF

Query:  ESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRD-RIIEDIGTMRRPVCTNYWARNPAFLLAFGLGSNIPLPSQL
        ES+NCVICLAEFE+GDE+RVLPNC+HAFHKGCIDQWL L SLLCPLCRD    E+I TMRRP CTN WARNPAF+LAFGLGSN+P+PSQ+
Subjt:  ESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRD-RIIEDIGTMRRPVCTNYWARNPAFLLAFGLGSNIPLPSQL

A0A6J1GEN4 RING-H2 finger protein ATL74-like1.6e-7173.16Show/hide
Query:  MNSVQDLGYSYRRLLKDSLFEHPFGGRERIVTISVTSLIVAMFVFSLLISLFTCFRRQLNPSPSKPLISTSSIQLTTIPVYIYGDSSSNPPSYCFT--SS
        MNS Q  GY+YRRLLKDSL + PFG  ER+VTI V S I A FV SL ISLFTCFRRQL  + SKP  ST S QL+++PVYIYGDS+     YCFT  SS
Subjt:  MNSVQDLGYSYRRLLKDSLFEHPFGGRERIVTISVTSLIVAMFVFSLLISLFTCFRRQLNPSPSKPLISTSSIQLTTIPVYIYGDSSSNPPSYCFT--SS

Query:  FESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRDRIIEDIGTMRRPVCTNYWARNPAFLLAFGLGSNIPLPSQL
        FE+RNCVICLAEFE GDELRVLPNCKHAFHKGCIDQWL LRSLLCPLCR+  I++IGTMR+PVCTN+WARNPAF+LAF   SN PLPSQL
Subjt:  FESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRDRIIEDIGTMRRPVCTNYWARNPAFLLAFGLGSNIPLPSQL

SwissProt top hitse value%identityAlignment
O22255 RING-H2 finger protein ATL646.1e-1243.96Show/hide
Query:  RQLNPSPSKPLISTSSIQLTTIPVYIYGDSSSNPPSYCFTSSFESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCR
        R L+ SP    +  +   L  IP+++Y  SS NPP        E   C +CL+EFE  DE R+LP C H+FH  CID W   RS  CPLCR
Subjt:  RQLNPSPSKPLISTSSIQLTTIPVYIYGDSSSNPPSYCFTSSFESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCR

Q5XF85 E3 ubiquitin-protein ligase ATL422.3e-1154.72Show/hide
Query:  SFESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRDRI
        S +  +C +CL++FE+ + LR+LP C+HAFH GCIDQW L +   CPLCRDR+
Subjt:  SFESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRDRI

Q67YI6 RING-H2 finger protein ATL655.5e-1341.67Show/hide
Query:  LTTIPVYIYGDSS-SNPPSYCFTSSFESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRDRIIEDIGTM
        + T+P+++Y  ++ +  P+   TS+   R+C +CL EFE GD +R LP C HAFH  CID+WL      CPLCR  I+   G +
Subjt:  LTTIPVYIYGDSS-SNPPSYCFTSSFESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRDRIIEDIGTM

Q940Q4 RING-H2 finger protein ATL139.5e-1343.02Show/hide
Query:  LTTIPVYIYGDSSSNPPSYCFTSSFESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRDRIIEDIGTMRRP
        + T+PV+ Y  S     +Y F       +C +CL EFE  D+LR+LP C HAFH  CID WLL  S  CPLCR  ++ D+ + + P
Subjt:  LTTIPVYIYGDSSSNPPSYCFTSSFESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRDRIIEDIGTMRRP

Q9SG96 RING-H2 finger protein ATL722.3e-1142.86Show/hide
Query:  LTTIPVYIYGDSSSNPPSYCFTSSFESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRDRII
        L  IPV +YG               ++  C+ICL +FE+G+++RVLP C H FH  CID WLL RS  CP CR  ++
Subjt:  LTTIPVYIYGDSSSNPPSYCFTSSFESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRDRII

Arabidopsis top hitse value%identityAlignment
AT1G63840.1 RING/U-box superfamily protein1.1e-1350.91Show/hide
Query:  ESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLL-LRSLLCPLCRDRIIED
        ES  C +CL +FEN DE+R L NC+H FH+GC+D+W++    + CPLCR + I D
Subjt:  ESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLL-LRSLLCPLCRDRIIED

AT2G47560.1 RING/U-box superfamily protein4.4e-1343.96Show/hide
Query:  RQLNPSPSKPLISTSSIQLTTIPVYIYGDSSSNPPSYCFTSSFESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCR
        R L+ SP    +  +   L  IP+++Y  SS NPP        E   C +CL+EFE  DE R+LP C H+FH  CID W   RS  CPLCR
Subjt:  RQLNPSPSKPLISTSSIQLTTIPVYIYGDSSSNPPSYCFTSSFESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCR

AT3G18930.1 RING/U-box superfamily protein3.9e-1441.67Show/hide
Query:  LTTIPVYIYGDSS-SNPPSYCFTSSFESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRDRIIEDIGTM
        + T+P+++Y  ++ +  P+   TS+   R+C +CL EFE GD +R LP C HAFH  CID+WL      CPLCR  I+   G +
Subjt:  LTTIPVYIYGDSS-SNPPSYCFTSSFESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRDRIIEDIGTM

AT3G18930.2 RING/U-box superfamily protein3.9e-1441.67Show/hide
Query:  LTTIPVYIYGDSS-SNPPSYCFTSSFESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRDRIIEDIGTM
        + T+P+++Y  ++ +  P+   TS+   R+C +CL EFE GD +R LP C HAFH  CID+WL      CPLCR  I+   G +
Subjt:  LTTIPVYIYGDSS-SNPPSYCFTSSFESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRDRIIEDIGTM

AT4G30400.1 RING/U-box superfamily protein6.7e-1443.02Show/hide
Query:  LTTIPVYIYGDSSSNPPSYCFTSSFESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRDRIIEDIGTMRRP
        + T+PV+ Y  S     +Y F       +C +CL EFE  D+LR+LP C HAFH  CID WLL  S  CPLCR  ++ D+ + + P
Subjt:  LTTIPVYIYGDSSSNPPSYCFTSSFESRNCVICLAEFENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRDRIIEDIGTMRRP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCAGTGCAAGATCTCGGTTACAGTTACCGACGCCTTTTGAAAGATTCCTTATTCGAACATCCATTTGGAGGCCGAGAAAGAATCGTTACCATATCTGTGACATC
TCTCATCGTTGCCATGTTCGTATTCTCTTTATTAATCTCCCTCTTCACCTGCTTCCGGCGTCAATTGAACCCCTCTCCCTCTAAACCTCTCATATCCACAAGTAGCATCC
AACTCACTACCATACCTGTATATATCTATGGTGATTCGTCTTCAAATCCACCGTCTTATTGTTTTACGTCGTCGTTCGAGTCCAGGAACTGTGTCATATGTTTGGCGGAG
TTCGAAAATGGAGATGAGCTTCGTGTTCTGCCTAACTGTAAGCATGCGTTTCATAAAGGTTGCATTGATCAATGGCTTCTGTTGAGGTCGTTGCTTTGCCCACTTTGCCG
GGACCGAATAATAGAGGACATTGGGACCATGAGGAGACCCGTTTGTACGAATTATTGGGCCCGAAATCCGGCCTTCTTATTGGCCTTCGGCCTTGGTAGTAATATTCCAC
TGCCCTCCCAGTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATTCAGTGCAAGATCTCGGTTACAGTTACCGACGCCTTTTGAAAGATTCCTTATTCGAACATCCATTTGGAGGCCGAGAAAGAATCGTTACCATATCTGTGACATC
TCTCATCGTTGCCATGTTCGTATTCTCTTTATTAATCTCCCTCTTCACCTGCTTCCGGCGTCAATTGAACCCCTCTCCCTCTAAACCTCTCATATCCACAAGTAGCATCC
AACTCACTACCATACCTGTATATATCTATGGTGATTCGTCTTCAAATCCACCGTCTTATTGTTTTACGTCGTCGTTCGAGTCCAGGAACTGTGTCATATGTTTGGCGGAG
TTCGAAAATGGAGATGAGCTTCGTGTTCTGCCTAACTGTAAGCATGCGTTTCATAAAGGTTGCATTGATCAATGGCTTCTGTTGAGGTCGTTGCTTTGCCCACTTTGCCG
GGACCGAATAATAGAGGACATTGGGACCATGAGGAGACCCGTTTGTACGAATTATTGGGCCCGAAATCCGGCCTTCTTATTGGCCTTCGGCCTTGGTAGTAATATTCCAC
TGCCCTCCCAGTTGTAA
Protein sequenceShow/hide protein sequence
MNSVQDLGYSYRRLLKDSLFEHPFGGRERIVTISVTSLIVAMFVFSLLISLFTCFRRQLNPSPSKPLISTSSIQLTTIPVYIYGDSSSNPPSYCFTSSFESRNCVICLAE
FENGDELRVLPNCKHAFHKGCIDQWLLLRSLLCPLCRDRIIEDIGTMRRPVCTNYWARNPAFLLAFGLGSNIPLPSQL