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Lag0013519 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0013519
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr1:50953597..50954139
RNA-Seq ExpressionLag0013519
SyntenyLag0013519
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066132.1 putative leucine-rich repeat receptor-like protein kinase [Cucumis melo var. makuwa]1.7e-2444.76Show/hide
Query:  MTNVFSNTTNAMAARATTFSSPPY-QLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPMMIPQAAETANTNLTTDVAAEASSSGATASG
        M N      + +   AT+F++PP  Q+LNQ+T+IKLDR N+LLWK LALPIL+ YKLEGHL G KPCP   +   +   +    T+   +          
Subjt:  MTNVFSNTTNAMAARATTFSSPPY-QLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPMMIPQAAETANTNLTTDVAAEASSSGATASG

Query:  DVSSRLESSLVVNPQYEAWVAVDQLLLGWLYNSMTPEVATQVM
          SS + +  ++NP +E W+  D LLLGWLYNSMTP+VA Q+M
Subjt:  DVSSRLESSLVVNPQYEAWVAVDQLLLGWLYNSMTPEVATQVM

XP_016902203.1 PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo]4.9e-2452.8Show/hide
Query:  FSSPPY-QLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPMMIPQAAETANTNLTTDVAAEASSSGATASGDVSSRLESSLVVNPQYEA
        FS+PP  Q+LNQ+T++KLDR N+LLWK LALPIL+ YKLEGHL    PCP   +  +A ++NT +T +        GA A+   SS + +  +VNP +E 
Subjt:  FSSPPY-QLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPMMIPQAAETANTNLTTDVAAEASSSGATASGDVSSRLESSLVVNPQYEA

Query:  WVAVDQLLLGWLYNSMTPEVATQVM
        WV  D LLLGWLYNSMTP+VA Q+M
Subjt:  WVAVDQLLLGWLYNSMTPEVATQVM

XP_016902205.1 PREDICTED: uncharacterized protein LOC107991581 isoform X5 [Cucumis melo]4.9e-2452.8Show/hide
Query:  FSSPPY-QLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPMMIPQAAETANTNLTTDVAAEASSSGATASGDVSSRLESSLVVNPQYEA
        FS+PP  Q+LNQ+T++KLDR N+LLWK LALPIL+ YKLEGHL    PCP   +  +A ++NT +T +        GA A+   SS + +  +VNP +E 
Subjt:  FSSPPY-QLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPMMIPQAAETANTNLTTDVAAEASSSGATASGDVSSRLESSLVVNPQYEA

Query:  WVAVDQLLLGWLYNSMTPEVATQVM
        WV  D LLLGWLYNSMTP+VA Q+M
Subjt:  WVAVDQLLLGWLYNSMTPEVATQVM

XP_022151683.1 uncharacterized protein LOC111019598 [Momordica charantia]1.5e-2556.35Show/hide
Query:  FSSPPY-QLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPM-MIPQAAETANTNLTTDVAAEASSSGATASGDVSSRLESSLVVNPQYE
        F+SPP  QLLNQITSIK+DRGNFLLW+NLALPILRSYKL  +L G KPCPP  ++P       T+  T++    SS             +SS  +NP YE
Subjt:  FSSPPY-QLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPM-MIPQAAETANTNLTTDVAAEASSSGATASGDVSSRLESSLVVNPQYE

Query:  AWVAVDQLLLGWLYNSMTPEVATQVM
        AW+ VD+LLLGWLYNSM  +VA QVM
Subjt:  AWVAVDQLLLGWLYNSMTPEVATQVM

XP_038887015.1 uncharacterized protein LOC120077182 [Benincasa hispida]9.9e-2552.59Show/hide
Query:  TNAMAARATTFSSPPY-QLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPMMIPQAAETANTNLTTDVAAEASSSGATASGDVSSRLES
        T +    +T FS+PP  QLLNQIT+ KL+RG F+LWK LALPILR YKLE HL GTK C PM       T  +  T D  ++AS   ++A+G+       
Subjt:  TNAMAARATTFSSPPY-QLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPMMIPQAAETANTNLTTDVAAEASSSGATASGDVSSRLES

Query:  SLVVNPQYEAWVAVDQLLLGWLYNSMTPEVATQVM
            NP YE WV  DQLLLGW YNSMTPEVA Q+M
Subjt:  SLVVNPQYEAWVAVDQLLLGWLYNSMTPEVATQVM

TrEMBL top hitse value%identityAlignment
A0A1S4E1U6 uncharacterized protein LOC107991581 isoform X12.4e-2452.8Show/hide
Query:  FSSPPY-QLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPMMIPQAAETANTNLTTDVAAEASSSGATASGDVSSRLESSLVVNPQYEA
        FS+PP  Q+LNQ+T++KLDR N+LLWK LALPIL+ YKLEGHL    PCP   +  +A ++NT +T +        GA A+   SS + +  +VNP +E 
Subjt:  FSSPPY-QLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPMMIPQAAETANTNLTTDVAAEASSSGATASGDVSSRLESSLVVNPQYEA

Query:  WVAVDQLLLGWLYNSMTPEVATQVM
        WV  D LLLGWLYNSMTP+VA Q+M
Subjt:  WVAVDQLLLGWLYNSMTPEVATQVM

A0A1S4E1U9 uncharacterized protein LOC107991581 isoform X42.4e-2452.8Show/hide
Query:  FSSPPY-QLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPMMIPQAAETANTNLTTDVAAEASSSGATASGDVSSRLESSLVVNPQYEA
        FS+PP  Q+LNQ+T++KLDR N+LLWK LALPIL+ YKLEGHL    PCP   +  +A ++NT +T +        GA A+   SS + +  +VNP +E 
Subjt:  FSSPPY-QLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPMMIPQAAETANTNLTTDVAAEASSSGATASGDVSSRLESSLVVNPQYEA

Query:  WVAVDQLLLGWLYNSMTPEVATQVM
        WV  D LLLGWLYNSMTP+VA Q+M
Subjt:  WVAVDQLLLGWLYNSMTPEVATQVM

A0A1S4E1V2 uncharacterized protein LOC107991581 isoform X32.4e-2452.8Show/hide
Query:  FSSPPY-QLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPMMIPQAAETANTNLTTDVAAEASSSGATASGDVSSRLESSLVVNPQYEA
        FS+PP  Q+LNQ+T++KLDR N+LLWK LALPIL+ YKLEGHL    PCP   +  +A ++NT +T +        GA A+   SS + +  +VNP +E 
Subjt:  FSSPPY-QLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPMMIPQAAETANTNLTTDVAAEASSSGATASGDVSSRLESSLVVNPQYEA

Query:  WVAVDQLLLGWLYNSMTPEVATQVM
        WV  D LLLGWLYNSMTP+VA Q+M
Subjt:  WVAVDQLLLGWLYNSMTPEVATQVM

A0A5A7VCS1 Putative leucine-rich repeat receptor-like protein kinase8.2e-2544.76Show/hide
Query:  MTNVFSNTTNAMAARATTFSSPPY-QLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPMMIPQAAETANTNLTTDVAAEASSSGATASG
        M N      + +   AT+F++PP  Q+LNQ+T+IKLDR N+LLWK LALPIL+ YKLEGHL G KPCP   +   +   +    T+   +          
Subjt:  MTNVFSNTTNAMAARATTFSSPPY-QLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPMMIPQAAETANTNLTTDVAAEASSSGATASG

Query:  DVSSRLESSLVVNPQYEAWVAVDQLLLGWLYNSMTPEVATQVM
          SS + +  ++NP +E W+  D LLLGWLYNSMTP+VA Q+M
Subjt:  DVSSRLESSLVVNPQYEAWVAVDQLLLGWLYNSMTPEVATQVM

A0A6J1DCW4 uncharacterized protein LOC1110195987.4e-2656.35Show/hide
Query:  FSSPPY-QLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPM-MIPQAAETANTNLTTDVAAEASSSGATASGDVSSRLESSLVVNPQYE
        F+SPP  QLLNQITSIK+DRGNFLLW+NLALPILRSYKL  +L G KPCPP  ++P       T+  T++    SS             +SS  +NP YE
Subjt:  FSSPPY-QLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPM-MIPQAAETANTNLTTDVAAEASSSGATASGDVSSRLESSLVVNPQYE

Query:  AWVAVDQLLLGWLYNSMTPEVATQVM
        AW+ VD+LLLGWLYNSM  +VA QVM
Subjt:  AWVAVDQLLLGWLYNSMTPEVATQVM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCAACGTCTTCTCAAACACAACAAATGCCATGGCCGCCAGAGCTACAACGTTCAGCAGCCCTCCTTATCAGCTACTCAATCAAATAACCTCCATCAAGCTTGATCG
TGGGAACTTTCTCTTGTGGAAGAATCTTGCACTTCCAATCCTCCGAAGCTATAAGTTGGAAGGACACTTACTGGGTACTAAACCATGCCCGCCGATGATGATTCCTCAAG
CAGCTGAAACGGCGAATACAAATTTGACCACTGATGTAGCGGCAGAAGCTTCGAGCTCAGGAGCGACTGCAAGCGGCGATGTGTCCTCTCGACTCGAGTCCAGTTTGGTG
GTAAATCCCCAATATGAAGCCTGGGTAGCTGTTGATCAGCTACTACTAGGCTGGTTATACAACTCAATGACTCCAGAGGTTGCAACCCAAGTGATGGAGTCGAGAATGCC
AAGGATCTTTGGTCAGCCATTCAAGAATTATTTGGGGTTCAATCACGAGCCGAGGAAGACTTCTTACGCCAAACCTTTCAACAAACCAGAAAAGGTAACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACCAACGTCTTCTCAAACACAACAAATGCCATGGCCGCCAGAGCTACAACGTTCAGCAGCCCTCCTTATCAGCTACTCAATCAAATAACCTCCATCAAGCTTGATCG
TGGGAACTTTCTCTTGTGGAAGAATCTTGCACTTCCAATCCTCCGAAGCTATAAGTTGGAAGGACACTTACTGGGTACTAAACCATGCCCGCCGATGATGATTCCTCAAG
CAGCTGAAACGGCGAATACAAATTTGACCACTGATGTAGCGGCAGAAGCTTCGAGCTCAGGAGCGACTGCAAGCGGCGATGTGTCCTCTCGACTCGAGTCCAGTTTGGTG
GTAAATCCCCAATATGAAGCCTGGGTAGCTGTTGATCAGCTACTACTAGGCTGGTTATACAACTCAATGACTCCAGAGGTTGCAACCCAAGTGATGGAGTCGAGAATGCC
AAGGATCTTTGGTCAGCCATTCAAGAATTATTTGGGGTTCAATCACGAGCCGAGGAAGACTTCTTACGCCAAACCTTTCAACAAACCAGAAAAGGTAACTTAA
Protein sequenceShow/hide protein sequence
MTNVFSNTTNAMAARATTFSSPPYQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPMMIPQAAETANTNLTTDVAAEASSSGATASGDVSSRLESSLV
VNPQYEAWVAVDQLLLGWLYNSMTPEVATQVMESRMPRIFGQPFKNYLGFNHEPRKTSYAKPFNKPEKVT