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Lag0013523 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0013523
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRING-type domain-containing protein
Genome locationchr1:50992141..50992458
RNA-Seq ExpressionLag0013523
SyntenyLag0013523
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8010664.1 hypothetical protein FH972_007015 [Carpinus fangiana]4.0e-1853.09Show/hide
Query:  MEREWCSVCLSKVMEGAEAQVLPCENEFHKICIERWFHQCQKQKTCPICQFWTRDEDG-RTTEVLTEEMVIWFTSFHVIGY
        +E E C VCLS++ +G + +VLPC +EFH++C++RWF+ C  +KTCP+C+F   ++D  R  EVLT+EMVIWF+SFHV G+
Subjt:  MEREWCSVCLSKVMEGAEAQVLPCENEFHKICIERWFHQCQKQKTCPICQFWTRDEDG-RTTEVLTEEMVIWFTSFHVIGY

KAG6603894.1 hypothetical protein SDJN03_04503, partial [Cucurbita argyrosperma subsp. sororia]2.4e-3168.82Show/hide
Query:  CRGPRRKVVDD-AMEREWCSVCLSKVMEGAEAQVLPCENEFHKICIERWFHQCQKQKTCPICQFWTRDEDGRTTEVLTEEMVIWFTSFHVIGY
        C       +DD AMEREWCSVCLS VME   AQ+LPC++EFHKIC+ERWFH+CQ QKTC IC+FW  DED + TEVLTEEMVIW TS HVI Y
Subjt:  CRGPRRKVVDD-AMEREWCSVCLSKVMEGAEAQVLPCENEFHKICIERWFHQCQKQKTCPICQFWTRDEDGRTTEVLTEEMVIWFTSFHVIGY

XP_022132660.1 E3 ubiquitin-protein ligase RNF181 homolog [Momordica charantia]3.4e-3372.34Show/hide
Query:  CRGPRRKVVDDAMEREWCSVCLSKVMEGAEAQV--LPCENEFHKICIERWFHQCQKQKTCPICQFWTRDEDGRTTEVLTEEMVIWFTSFHVIGY
        C       + DA+ REWCSVCLSKVMEG E++V  LPC +EFHKICI+RWFH+C  QKTCPICQFW RD+DG+TTEVLTEEMVIWFTSFHV+GY
Subjt:  CRGPRRKVVDDAMEREWCSVCLSKVMEGAEAQV--LPCENEFHKICIERWFHQCQKQKTCPICQFWTRDEDGRTTEVLTEEMVIWFTSFHVIGY

XP_022977421.1 uncharacterized protein LOC111477769 isoform X1 [Cucurbita maxima]5.8e-3360.53Show/hide
Query:  MHCYVGMLLNHVL--------CRGPRRKVVDD-AMEREWCSVCLSKVMEGAEAQVLPCENEFHKICIERWFHQCQKQKTCPICQFWTRDEDGRTTEVLTE
        MH +VG +++           C       +DD A+EREWCSVC S VME   AQ+LPC++EFHKIC+ERWFH+CQ QKTCPICQFW RDED + TEVLTE
Subjt:  MHCYVGMLLNHVL--------CRGPRRKVVDD-AMEREWCSVCLSKVMEGAEAQVLPCENEFHKICIERWFHQCQKQKTCPICQFWTRDEDGRTTEVLTE

Query:  EMVIWFTSFHVIGY
        EMVIW TS HVI Y
Subjt:  EMVIWFTSFHVIGY

XP_038883680.1 E3 ubiquitin-protein ligase znrf3-like [Benincasa hispida]4.9e-3281.01Show/hide
Query:  AMEREWCSVCLSKVMEGAEAQVLPCENEFHKICIERWFHQCQKQKTCPICQFWTRDEDGRTTEVLTEEMVIWFTSFHVI
        AME EWCSVCLSKVME  EA+VLPC++E HKIC+ERWFH CQKQKTCPIC+FW RDED +TTEVLTEEMVIWFT F VI
Subjt:  AMEREWCSVCLSKVMEGAEAQVLPCENEFHKICIERWFHQCQKQKTCPICQFWTRDEDGRTTEVLTEEMVIWFTSFHVI

TrEMBL top hitse value%identityAlignment
A0A4S4DKH4 RING-type domain-containing protein2.5e-1852.44Show/hide
Query:  AMEREWCSVCLSKVMEGAEAQVLPCENEFHKICIERWFHQCQKQKTCPICQFWTRDED-GRTTEVLTEEMVIWFTSFHVIGY
        A++ E C VCL ++ EG + +VLPC +EFH+ C+ RW + C  QKTCP+C+F   DE+  R  E LT+EMVIWF+SFHV G+
Subjt:  AMEREWCSVCLSKVMEGAEAQVLPCENEFHKICIERWFHQCQKQKTCPICQFWTRDED-GRTTEVLTEEMVIWFTSFHVIGY

A0A5B6YSP6 Putative E3 ubiquitin-protein ligase RHA2A (Fragment)6.7e-1952.75Show/hide
Query:  PRRKVVDDAMEREWCSVCLSKVMEGAE-AQVLPCENEFHKICIERWFHQCQKQKTCPICQFWTRDEDG-RTTEVLTEEMVIWFTSFHVIGY
        P R V  +A+E E C VCLS++ EG E  +VLPC +EFH++C++RWF+ C   KTCP+C+F   DE+  +  E LTEEMVIWF+SFH  G+
Subjt:  PRRKVVDDAMEREWCSVCLSKVMEGAE-AQVLPCENEFHKICIERWFHQCQKQKTCPICQFWTRDEDG-RTTEVLTEEMVIWFTSFHVIGY

A0A5N6QUB8 RING-type domain-containing protein1.9e-1853.09Show/hide
Query:  MEREWCSVCLSKVMEGAEAQVLPCENEFHKICIERWFHQCQKQKTCPICQFWTRDEDG-RTTEVLTEEMVIWFTSFHVIGY
        +E E C VCLS++ +G + +VLPC +EFH++C++RWF+ C  +KTCP+C+F   ++D  R  EVLT+EMVIWF+SFHV G+
Subjt:  MEREWCSVCLSKVMEGAEAQVLPCENEFHKICIERWFHQCQKQKTCPICQFWTRDEDG-RTTEVLTEEMVIWFTSFHVIGY

A0A6J1BT35 E3 ubiquitin-protein ligase RNF181 homolog1.6e-3372.34Show/hide
Query:  CRGPRRKVVDDAMEREWCSVCLSKVMEGAEAQV--LPCENEFHKICIERWFHQCQKQKTCPICQFWTRDEDGRTTEVLTEEMVIWFTSFHVIGY
        C       + DA+ REWCSVCLSKVMEG E++V  LPC +EFHKICI+RWFH+C  QKTCPICQFW RD+DG+TTEVLTEEMVIWFTSFHV+GY
Subjt:  CRGPRRKVVDDAMEREWCSVCLSKVMEGAEAQV--LPCENEFHKICIERWFHQCQKQKTCPICQFWTRDEDGRTTEVLTEEMVIWFTSFHVIGY

A0A6J1IJV3 uncharacterized protein LOC111477769 isoform X12.8e-3360.53Show/hide
Query:  MHCYVGMLLNHVL--------CRGPRRKVVDD-AMEREWCSVCLSKVMEGAEAQVLPCENEFHKICIERWFHQCQKQKTCPICQFWTRDEDGRTTEVLTE
        MH +VG +++           C       +DD A+EREWCSVC S VME   AQ+LPC++EFHKIC+ERWFH+CQ QKTCPICQFW RDED + TEVLTE
Subjt:  MHCYVGMLLNHVL--------CRGPRRKVVDD-AMEREWCSVCLSKVMEGAEAQVLPCENEFHKICIERWFHQCQKQKTCPICQFWTRDEDGRTTEVLTE

Query:  EMVIWFTSFHVIGY
        EMVIW TS HVI Y
Subjt:  EMVIWFTSFHVIGY

SwissProt top hitse value%identityAlignment
P0C035 RING-H2 finger protein ATL608.2e-0647.83Show/hide
Query:  CSVCLSKVMEGAEAQVLP-CENEFHKICIERWFHQCQKQKTCPICQ
        C+VCLS +++G +A+VLP C + FH  CI+ WF   Q   TCP+C+
Subjt:  CSVCLSKVMEGAEAQVLP-CENEFHKICIERWFHQCQKQKTCPICQ

Q75DC2 Alcohol-sensitive RING finger protein 15.3e-0535.56Show/hide
Query:  CSVCLSKVMEGAEAQVLPCENEFHKICIERWFHQCQKQKTCPICQ
        CS+C   +  G   +++PC +E+H  CI +WFH     ++CP+C+
Subjt:  CSVCLSKVMEGAEAQVLPCENEFHKICIERWFHQCQKQKTCPICQ

Q93Z92 E3 ubiquitin-protein ligase At4g116802.4e-0539.13Show/hide
Query:  CSVCLSKVMEGAEAQVLPCENEFHKICIERWFHQCQKQKTCPICQF
        C +CL +  +G E + LPC + FH  CI++W H       CP+C+F
Subjt:  CSVCLSKVMEGAEAQVLPCENEFHKICIERWFHQCQKQKTCPICQF

Q9LUL6 Putative RING-H2 finger protein ATL614.1e-0547.83Show/hide
Query:  CSVCLSKVMEGAEAQVLP-CENEFHKICIERWFHQCQKQKTCPICQ
        C VCLS++ +G +A+VLP C++ FH  CI+ W    Q   TCPIC+
Subjt:  CSVCLSKVMEGAEAQVLP-CENEFHKICIERWFHQCQKQKTCPICQ

Q9XF63 RING-H2 finger protein ATL32.8e-0647.83Show/hide
Query:  CSVCLSKVMEGAEAQVLP-CENEFHKICIERWFHQCQKQKTCPICQ
        CS+CLS++++G +A++LP C + FH  CI+ WF   Q   TCPIC+
Subjt:  CSVCLSKVMEGAEAQVLP-CENEFHKICIERWFHQCQKQKTCPICQ

Arabidopsis top hitse value%identityAlignment
AT1G53820.1 RING/U-box superfamily protein5.8e-0747.83Show/hide
Query:  CSVCLSKVMEGAEAQVLP-CENEFHKICIERWFHQCQKQKTCPICQ
        C+VCLS +++G +A+VLP C + FH  CI+ WF   Q   TCP+C+
Subjt:  CSVCLSKVMEGAEAQVLP-CENEFHKICIERWFHQCQKQKTCPICQ

AT1G72310.1 RING/U-box superfamily protein2.0e-0747.83Show/hide
Query:  CSVCLSKVMEGAEAQVLP-CENEFHKICIERWFHQCQKQKTCPICQ
        CS+CLS++++G +A++LP C + FH  CI+ WF   Q   TCPIC+
Subjt:  CSVCLSKVMEGAEAQVLP-CENEFHKICIERWFHQCQKQKTCPICQ

AT3G51325.1 RING/U-box superfamily protein5.4e-1339.74Show/hide
Query:  DAMEREWCSVCLSKVMEGAEAQVLPCENEFHKICIERWFHQCQKQKTCPICQFWTRDEDGRTTEVLTEEMVIWFTSFH
        +  E E CSVCL ++      + LPC +EFH +C++ WF+  +K   CP+C+F        TT +LT+E+++WF+SFH
Subjt:  DAMEREWCSVCLSKVMEGAEAQVLPCENEFHKICIERWFHQCQKQKTCPICQFWTRDEDGRTTEVLTEEMVIWFTSFH

AT3G61180.1 RING/U-box superfamily protein3.4e-0739.13Show/hide
Query:  CSVCLSKVMEGAEAQVLPCENEFHKICIERWFHQCQKQKTCPICQF
        CS+CL    +G E + LPC + FH +C+++W    +   TCP+C+F
Subjt:  CSVCLSKVMEGAEAQVLPCENEFHKICIERWFHQCQKQKTCPICQF

AT4G11680.1 Zinc finger, C3HC4 type (RING finger) family protein1.7e-0639.13Show/hide
Query:  CSVCLSKVMEGAEAQVLPCENEFHKICIERWFHQCQKQKTCPICQF
        C +CL +  +G E + LPC + FH  CI++W H       CP+C+F
Subjt:  CSVCLSKVMEGAEAQVLPCENEFHKICIERWFHQCQKQKTCPICQF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTGTTATGTGGGGATGTTATTGAATCATGTTTTATGCAGGGGGCCAAGGAGGAAGGTTGTGGATGATGCCATGGAGAGGGAGTGGTGTTCTGTGTGTTTGTCAAA
AGTAATGGAGGGAGCGGAAGCACAAGTACTCCCTTGCGAAAACGAGTTTCACAAGATATGCATCGAGAGGTGGTTCCATCAATGCCAGAAACAGAAAACTTGTCCAATTT
GTCAGTTCTGGACGAGAGACGAAGATGGTCGAACAACAGAAGTGCTCACCGAGGAGATGGTAATATGGTTCACTTCTTTTCATGTTATTGGTTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGCATTGTTATGTGGGGATGTTATTGAATCATGTTTTATGCAGGGGGCCAAGGAGGAAGGTTGTGGATGATGCCATGGAGAGGGAGTGGTGTTCTGTGTGTTTGTCAAA
AGTAATGGAGGGAGCGGAAGCACAAGTACTCCCTTGCGAAAACGAGTTTCACAAGATATGCATCGAGAGGTGGTTCCATCAATGCCAGAAACAGAAAACTTGTCCAATTT
GTCAGTTCTGGACGAGAGACGAAGATGGTCGAACAACAGAAGTGCTCACCGAGGAGATGGTAATATGGTTCACTTCTTTTCATGTTATTGGTTACTAA
Protein sequenceShow/hide protein sequence
MHCYVGMLLNHVLCRGPRRKVVDDAMEREWCSVCLSKVMEGAEAQVLPCENEFHKICIERWFHQCQKQKTCPICQFWTRDEDGRTTEVLTEEMVIWFTSFHVIGY