; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0013539 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0013539
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionserine/arginine-rich splicing factor SR45a-like
Genome locationchr1:51112949..51116103
RNA-Seq ExpressionLag0013539
SyntenyLag0013539
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016899368.1 PREDICTED: serine/arginine-rich splicing factor SR45a [Cucumis melo]1.1e-11194.19Show/hide
Query:  MADSHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP
        MAD HRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRS SRGRSRSRSRGR+++ NPGNTLYVTGLSTRVTERDLE+HFSKEGKVASCFLVVEP
Subjt:  MADSHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP

Query:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRG-RYR-GGSLREDYGYRRSPRRSPYRGAREY
        RTRISRGFAFVTMDNVDDANRCVKHLNQS+LEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRG RYR GGS REDYGYRRSPRRSPYRGAREY
Subjt:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRG-RYR-GGSLREDYGYRRSPRRSPYRGAREY

Query:  SPRHSPPY-GGRSRRDHSRS-PPYSPPY-GSPDRRYPRGSR
        SPRHSPPY GGRSRRDHSRS PPYSPPY GSPDRRYPRGSR
Subjt:  SPRHSPPY-GGRSRRDHSRS-PPYSPPY-GSPDRRYPRGSR

XP_022133034.1 serine/arginine-rich splicing factor SR45a isoform X1 [Momordica charantia]1.2e-11093.33Show/hide
Query:  MADSHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP
        MADSHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGR+++LN GNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP
Subjt:  MADSHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP

Query:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDR-GRYR--GGSLREDYGYRRSPRRSPYRGARE
        RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDR GRY   GGS REDYGYRRSPRRSPYRGARE
Subjt:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDR-GRYR--GGSLREDYGYRRSPRRSPYRGARE

Query:  YSPRHSPPYGGRSRRDHSRSPPYSPPYGSPDRRY-PRGSR
        Y    SPPYGGRSRR+HSRSPPYSPPYGSPDRRY PRG+R
Subjt:  YSPRHSPPYGGRSRRDHSRSPPYSPPYGSPDRRY-PRGSR

XP_023003930.1 serine/arginine-rich splicing factor SR45a-like [Cucurbita maxima]8.8e-11494.49Show/hide
Query:  MADSHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP
        MA SHRKR+SRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRS+SRGRSRSRSRGREN+LNPGNTLYVTGLS RVTERDLEEHFSKEGKVASCFLVVEP
Subjt:  MADSHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP

Query:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGRYRGGSLREDYGYRRSPRRSPYRGAREYSP
        RTRISRGFAFV MDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLK+TRDSGYR DRGRYRGGSLR+DYGYRRSPRRSPYRG REYSP
Subjt:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGRYRGGSLREDYGYRRSPRRSPYRGAREYSP

Query:  RHSPPYGGRSRRDHSRSPPYSPPYGSPDRRYPRGSR
        RHSP YGGRSRRDHSRSPPYS PYGSPD RYPRGSR
Subjt:  RHSPPYGGRSRRDHSRSPPYSPPYGSPDRRYPRGSR

XP_031743118.1 serine/arginine-rich splicing factor SR45a [Cucumis sativus]1.6e-11093.85Show/hide
Query:  MADSHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP
        MAD HRKRYSRSPSPW+APSRSRSRSRSRSRPRSRSRSWSRPRS SRGRSRSRSRGRE++ NPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP
Subjt:  MADSHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP

Query:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYR-GDRG--RYR--GGSLREDYGYRRSPRRSPYRGA
        RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYR GDRG  RYR  GGS REDYGYRRSPRRSPYRGA
Subjt:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYR-GDRG--RYR--GGSLREDYGYRRSPRRSPYRGA

Query:  REYSPRHSPPY-GGRSRRDHSRS-PPYSPPY-GSPDRRYPRGSR
        REYSPRHSPPY GGRSRRDHSRS PPYSPPY GSPDRRYPRGSR
Subjt:  REYSPRHSPPY-GGRSRRDHSRS-PPYSPPY-GSPDRRYPRGSR

XP_038881911.1 serine/arginine-rich splicing factor SR45a [Benincasa hispida]6.3e-11293.78Show/hide
Query:  MADSHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP
        MADSHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRS SRGRSRSRSRGR+++ NPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP
Subjt:  MADSHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP

Query:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRG-RYR-GGSLREDYGYRRSPRRSPYRGAREY
        RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRD+GYRGDRG RYR GGS R+DYGYRRSPRRSPYRGAREY
Subjt:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRG-RYR-GGSLREDYGYRRSPRRSPYRGAREY

Query:  S-PRHSPPYGGRSRRDHSRSPPYSPP--YGSPDRRYPRGSR
        S PRHSPPYGGRSRRDHSRSPPY+PP   GSPDRRYPRGSR
Subjt:  S-PRHSPPYGGRSRRDHSRSPPYSPP--YGSPDRRYPRGSR

TrEMBL top hitse value%identityAlignment
A0A0A0KMM4 RRM domain-containing protein7.5e-11193.85Show/hide
Query:  MADSHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP
        MAD HRKRYSRSPSPW+APSRSRSRSRSRSRPRSRSRSWSRPRS SRGRSRSRSRGRE++ NPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP
Subjt:  MADSHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP

Query:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYR-GDRG--RYR--GGSLREDYGYRRSPRRSPYRGA
        RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYR GDRG  RYR  GGS REDYGYRRSPRRSPYRGA
Subjt:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYR-GDRG--RYR--GGSLREDYGYRRSPRRSPYRGA

Query:  REYSPRHSPPY-GGRSRRDHSRS-PPYSPPY-GSPDRRYPRGSR
        REYSPRHSPPY GGRSRRDHSRS PPYSPPY GSPDRRYPRGSR
Subjt:  REYSPRHSPPY-GGRSRRDHSRS-PPYSPPY-GSPDRRYPRGSR

A0A1S4DTT1 serine/arginine-rich splicing factor SR45a5.2e-11294.19Show/hide
Query:  MADSHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP
        MAD HRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRS SRGRSRSRSRGR+++ NPGNTLYVTGLSTRVTERDLE+HFSKEGKVASCFLVVEP
Subjt:  MADSHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP

Query:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRG-RYR-GGSLREDYGYRRSPRRSPYRGAREY
        RTRISRGFAFVTMDNVDDANRCVKHLNQS+LEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRG RYR GGS REDYGYRRSPRRSPYRGAREY
Subjt:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRG-RYR-GGSLREDYGYRRSPRRSPYRGAREY

Query:  SPRHSPPY-GGRSRRDHSRS-PPYSPPY-GSPDRRYPRGSR
        SPRHSPPY GGRSRRDHSRS PPYSPPY GSPDRRYPRGSR
Subjt:  SPRHSPPY-GGRSRRDHSRS-PPYSPPY-GSPDRRYPRGSR

A0A6J1BUT3 serine/arginine-rich splicing factor SR45a isoform X15.8e-11193.33Show/hide
Query:  MADSHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP
        MADSHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGR+++LN GNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP
Subjt:  MADSHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP

Query:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDR-GRYR--GGSLREDYGYRRSPRRSPYRGARE
        RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDR GRY   GGS REDYGYRRSPRRSPYRGARE
Subjt:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDR-GRYR--GGSLREDYGYRRSPRRSPYRGARE

Query:  YSPRHSPPYGGRSRRDHSRSPPYSPPYGSPDRRY-PRGSR
        Y    SPPYGGRSRR+HSRSPPYSPPYGSPDRRY PRG+R
Subjt:  YSPRHSPPYGGRSRRDHSRSPPYSPPYGSPDRRY-PRGSR

A0A6J1EGF8 serine/arginine-rich splicing factor SR45a-like9.8e-11192.8Show/hide
Query:  MADSHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP
        MADSHRKRYSRSPSPWRAP      SRSRSRPRSRSRSWSRPRS+SRGRSRSRSRGREN+LNPGNTLYVTGLS RVTERDLEEHFSKEGKVASCFLVVEP
Subjt:  MADSHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP

Query:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGRYRGGSLREDYGYRRSPRRSPYRGAREYSP
        RTRISRGFAFV MDNVDDANR VKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLK+TRDSGYR DRGRYRGGSLR+DYGYRRSPRRSPYRG REYSP
Subjt:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGRYRGGSLREDYGYRRSPRRSPYRGAREYSP

Query:  RHSPPYGGRSRRDHSRSPPYSPPYGSPDRRYPRGSR
        RHSP YGGRSRRDHSRSPPYS PYGSPDRRYPRGSR
Subjt:  RHSPPYGGRSRRDHSRSPPYSPPYGSPDRRYPRGSR

A0A6J1KT61 serine/arginine-rich splicing factor SR45a-like4.3e-11494.49Show/hide
Query:  MADSHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP
        MA SHRKR+SRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRS+SRGRSRSRSRGREN+LNPGNTLYVTGLS RVTERDLEEHFSKEGKVASCFLVVEP
Subjt:  MADSHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP

Query:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGRYRGGSLREDYGYRRSPRRSPYRGAREYSP
        RTRISRGFAFV MDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLK+TRDSGYR DRGRYRGGSLR+DYGYRRSPRRSPYRG REYSP
Subjt:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGRYRGGSLREDYGYRRSPRRSPYRGAREYSP

Query:  RHSPPYGGRSRRDHSRSPPYSPPYGSPDRRYPRGSR
        RHSP YGGRSRRDHSRSPPYS PYGSPD RYPRGSR
Subjt:  RHSPPYGGRSRRDHSRSPPYSPPYGSPDRRYPRGSR

SwissProt top hitse value%identityAlignment
P62995 Transformer-2 protein homolog beta1.1e-1843.9Show/hide
Query:  DSHRKR-YSRSPSPWRAPSR-------SRSRSRSRSRPRSRSRSWSRPRSRSRGRS------RSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKE
        DS R R  SRS S  R+ SR       +RSRSRSRS  RSRSRS+SR   R    S      R R  G   + +P   L V GLS   TERDL E FSK 
Subjt:  DSHRKR-YSRSPSPWRAPSR-------SRSRSRSRSRPRSRSRSWSRPRSRSRGRS------RSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKE

Query:  GKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG--DRGRYRGGSLREDYGYRRS
        G +A   +V + ++R SRGFAFV  +NVDDA    +  N   L+GR I V+ S  KRP TPTPG Y+G  +   S  R   DRG  RG   R DY Y RS
Subjt:  GKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG--DRGRYRGGSLREDYGYRRS

Query:  PR-----RSPYRGARE----YSPRHSPPYGGR-SRRDHSRSPPYSP
         R        +R A++    Y  R   PY  R   R  SRS  YSP
Subjt:  PR-----RSPYRGARE----YSPRHSPPYGGR-SRRDHSRSPPYSP

P62996 Transformer-2 protein homolog beta1.1e-1843.9Show/hide
Query:  DSHRKR-YSRSPSPWRAPSR-------SRSRSRSRSRPRSRSRSWSRPRSRSRGRS------RSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKE
        DS R R  SRS S  R+ SR       +RSRSRSRS  RSRSRS+SR   R    S      R R  G   + +P   L V GLS   TERDL E FSK 
Subjt:  DSHRKR-YSRSPSPWRAPSR-------SRSRSRSRSRPRSRSRSWSRPRSRSRGRS------RSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKE

Query:  GKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG--DRGRYRGGSLREDYGYRRS
        G +A   +V + ++R SRGFAFV  +NVDDA    +  N   L+GR I V+ S  KRP TPTPG Y+G  +   S  R   DRG  RG   R DY Y RS
Subjt:  GKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG--DRGRYRGGSLREDYGYRRS

Query:  PR-----RSPYRGARE----YSPRHSPPYGGR-SRRDHSRSPPYSP
         R        +R A++    Y  R   PY  R   R  SRS  YSP
Subjt:  PR-----RSPYRGARE----YSPRHSPPYGGR-SRRDHSRSPPYSP

P62997 Transformer-2 protein homolog beta1.1e-1843.9Show/hide
Query:  DSHRKR-YSRSPSPWRAPSR-------SRSRSRSRSRPRSRSRSWSRPRSRSRGRS------RSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKE
        DS R R  SRS S  R+ SR       +RSRSRSRS  RSRSRS+SR   R    S      R R  G   + +P   L V GLS   TERDL E FSK 
Subjt:  DSHRKR-YSRSPSPWRAPSR-------SRSRSRSRSRPRSRSRSWSRPRSRSRGRS------RSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKE

Query:  GKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG--DRGRYRGGSLREDYGYRRS
        G +A   +V + ++R SRGFAFV  +NVDDA    +  N   L+GR I V+ S  KRP TPTPG Y+G  +   S  R   DRG  RG   R DY Y RS
Subjt:  GKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG--DRGRYRGGSLREDYGYRRS

Query:  PR-----RSPYRGARE----YSPRHSPPYGGR-SRRDHSRSPPYSP
         R        +R A++    Y  R   PY  R   R  SRS  YSP
Subjt:  PR-----RSPYRGARE----YSPRHSPPYGGR-SRRDHSRSPPYSP

Q3ZBT6 Transformer-2 protein homolog beta1.1e-1843.9Show/hide
Query:  DSHRKR-YSRSPSPWRAPSR-------SRSRSRSRSRPRSRSRSWSRPRSRSRGRS------RSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKE
        DS R R  SRS S  R+ SR       +RSRSRSRS  RSRSRS+SR   R    S      R R  G   + +P   L V GLS   TERDL E FSK 
Subjt:  DSHRKR-YSRSPSPWRAPSR-------SRSRSRSRSRPRSRSRSWSRPRSRSRGRS------RSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKE

Query:  GKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG--DRGRYRGGSLREDYGYRRS
        G +A   +V + ++R SRGFAFV  +NVDDA    +  N   L+GR I V+ S  KRP TPTPG Y+G  +   S  R   DRG  RG   R DY Y RS
Subjt:  GKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG--DRGRYRGGSLREDYGYRRS

Query:  PR-----RSPYRGARE----YSPRHSPPYGGR-SRRDHSRSPPYSP
         R        +R A++    Y  R   PY  R   R  SRS  YSP
Subjt:  PR-----RSPYRGARE----YSPRHSPPYGGR-SRRDHSRSPPYSP

Q84TH4 Serine/arginine-rich splicing factor SR45a7.6e-3646.54Show/hide
Query:  MADSHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP
        M+ S R RYS S SP+    + R RS SRS  RS +RS S                  ++ NPGN+LYVTGLS RVTERDLE+HF+KEGKV    LV++P
Subjt:  MADSHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP

Query:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKS--------------------TRDSGYRGDRGRYRGGSLRED
         TR SRGF F++M +V DANRC++ L+ S+L+GR ITVEK+RR+R RTPTPG YLGL++                    +R   Y  DRGR    S    
Subjt:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKS--------------------TRDSGYRGDRGRYRGGSLRED

Query:  YGYR-RSPRRSP-YRGAREYSPRHSPPYGGRSRRDHSRSPPYSPPYGSPD--RRYPRGSR
        YG R RS   SP YR  R YSP  SP    R  R   RS  YSP Y   D  R Y R  R
Subjt:  YGYR-RSPRRSP-YRGAREYSPRHSPPYGGRSRRDHSRSPPYSPPYGSPD--RRYPRGSR

Arabidopsis top hitse value%identityAlignment
AT4G35785.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.4e-6468.03Show/hide
Query:  MADS-HRKRYSRSPSP--WRAPSRSRSRSRSRSRPRSRSRSWSRPR----SRSRGRSRSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKEGKVAS
        MADS  R+R SRSPSP   RA SRSRSRSRSRSRPR RSRS S PR    SRSRGRSRSRSRG E   NPG TLYVTGLSTRVT++DLE HF+KEGKVAS
Subjt:  MADS-HRKRYSRSPSP--WRAPSRSRSRSRSRSRPRSRSRSWSRPR----SRSRGRSRSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKEGKVAS

Query:  CFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG--DRGRYRGGSLREDYGYRRSPRRSP
        CFLV+EPRTR+SRGFAFVTM ++ DA RC+K+LNQS+LEGRYITVE+SRRKRPRTPTPGHYLGLKS+RDS   G   RGR+     R+DY  RRSPR   
Subjt:  CFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG--DRGRYRGGSLREDYGYRRSPRRSP

Query:  YRGAREYSPRHSPPYGGRSRRDHSRSPPYSPPYGSPDRRYPRGS
            R+YSPR       RSRRD S    YSP   SP+RR  R S
Subjt:  YRGAREYSPRHSPPYGGRSRRDHSRSPPYSPPYGSPDRRYPRGS

AT4G35785.2 RNA-binding (RRM/RBD/RNP motifs) family protein5.6e-6668.03Show/hide
Query:  MADS-HRKRYSRSPSP--WRAPSRSRSRSRSRSRPRSRSRSWSRPR----SRSRGRSRSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKEGKVAS
        MADS  R+R SRSPSP   RA SRSRSRSRSRSRPR RSRS S PR    SRSRGRSRSRSRGR    NPG TLYVTGLSTRVT++DLE HF+KEGKVAS
Subjt:  MADS-HRKRYSRSPSP--WRAPSRSRSRSRSRSRPRSRSRSWSRPR----SRSRGRSRSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKEGKVAS

Query:  CFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG--DRGRYRGGSLREDYGYRRSPRRSP
        CFLV+EPRTR+SRGFAFVTM ++ DA RC+K+LNQS+LEGRYITVE+SRRKRPRTPTPGHYLGLKS+RDS   G   RGR+     R+DY  RRSPR   
Subjt:  CFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG--DRGRYRGGSLREDYGYRRSPRRSP

Query:  YRGAREYSPRHSPPYGGRSRRDHSRSPPYSPPYGSPDRRYPRGS
            R+YSPR       RSRRD S    YSP   SP+RR  R S
Subjt:  YRGAREYSPRHSPPYGGRSRRDHSRSPPYSPPYGSPDRRYPRGS

AT4G35785.3 RNA-binding (RRM/RBD/RNP motifs) family protein5.8e-4776.19Show/hide
Query:  MADS-HRKRYSRSPSP--WRAPSRSRSRSRSRSRPRSRSRSWSRPR----SRSRGRSRSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKEGKVAS
        MADS  R+R SRSPSP   RA SRSRSRSRSRSRPR RSRS S PR    SRSRGRSRSRSRGR    NPG TLYVTGLSTRVT++DLE HF+KEGKVAS
Subjt:  MADS-HRKRYSRSPSP--WRAPSRSRSRSRSRSRPRSRSRSWSRPR----SRSRGRSRSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKEGKVAS

Query:  CFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEK
        CFLV+EPRTR+SRGFAFVTM ++ DA RC+K+LNQS+LEGRYITVE+
Subjt:  CFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEK

AT4G35785.4 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-4269.14Show/hide
Query:  MADS-HRKRYSRSPSP--WRAPSRSRSRSRSRSRPRSRSRSWSRPR----SRSRG---------------RSRSRSRGRENSLNPGNTLYVTGLSTRVTE
        MADS  R+R SRSPSP   RA SRSRSRSRSRSRPR RSRS S PR    SRSRG               RSRSRSRG E   NPG TLYVTGLSTRVT+
Subjt:  MADS-HRKRYSRSPSP--WRAPSRSRSRSRSRSRPRSRSRSWSRPR----SRSRG---------------RSRSRSRGRENSLNPGNTLYVTGLSTRVTE

Query:  RDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEK
        +DLE HF+KEGKVASCFLV+EPRTR+SRGFAFVTM ++ DA RC+K+LNQS+LEGRYITVE+
Subjt:  RDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEK

AT4G35785.5 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-4269.14Show/hide
Query:  MADS-HRKRYSRSPSP--WRAPSRSRSRSRSRSRPRSRSRSWSRPR----SRSRG---------------RSRSRSRGRENSLNPGNTLYVTGLSTRVTE
        MADS  R+R SRSPSP   RA SRSRSRSRSRSRPR RSRS S PR    SRSRG               RSRSRSRG E   NPG TLYVTGLSTRVT+
Subjt:  MADS-HRKRYSRSPSP--WRAPSRSRSRSRSRSRPRSRSRSWSRPR----SRSRG---------------RSRSRSRGRENSLNPGNTLYVTGLSTRVTE

Query:  RDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEK
        +DLE HF+KEGKVASCFLV+EPRTR+SRGFAFVTM ++ DA RC+K+LNQS+LEGRYITVE+
Subjt:  RDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGATTCTCATCGCAAAAGGTACTCTCGATCTCCTTCGCCCTGGCGAGCTCCTTCAAGATCAAGATCTAGATCTAGGTCACGATCTAGGCCCAGGTCTAGATCTAG
ATCTTGGTCAAGGCCAAGGTCTCGAAGTCGTGGAAGATCAAGGTCCAGAAGTCGTGGAAGGGAGAATTCACTTAACCCCGGGAATACGCTCTATGTTACTGGTCTATCTA
CAAGGGTCACTGAAAGAGACCTTGAAGAGCACTTTTCCAAGGAGGGCAAGGTAGCTTCTTGTTTTCTTGTGGTTGAACCCCGAACACGGATTTCCCGTGGTTTTGCATTT
GTTACGATGGACAATGTTGATGATGCTAATCGGTGTGTTAAGCATCTCAACCAGTCAATTCTAGAAGGTCGATATATAACTGTGGAGAAGTCACGGAGGAAACGGCCAAG
AACTCCAACGCCTGGACACTATTTGGGGTTGAAAAGCACTAGAGACTCTGGCTACCGTGGCGATCGAGGTCGGTACCGTGGTGGCTCCCTCCGTGAAGACTATGGATATC
GTCGGTCTCCAAGACGCTCGCCATATCGAGGGGCTCGAGAGTACTCCCCTAGACACTCCCCCCCTTATGGTGGAAGATCAAGGAGGGATCACTCGAGGTCGCCTCCTTAC
TCTCCTCCTTATGGCAGCCCGGATAGGAGGTATCCTCGTGGCTCTAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGATTCTCATCGCAAAAGGTACTCTCGATCTCCTTCGCCCTGGCGAGCTCCTTCAAGATCAAGATCTAGATCTAGGTCACGATCTAGGCCCAGGTCTAGATCTAG
ATCTTGGTCAAGGCCAAGGTCTCGAAGTCGTGGAAGATCAAGGTCCAGAAGTCGTGGAAGGGAGAATTCACTTAACCCCGGGAATACGCTCTATGTTACTGGTCTATCTA
CAAGGGTCACTGAAAGAGACCTTGAAGAGCACTTTTCCAAGGAGGGCAAGGTAGCTTCTTGTTTTCTTGTGGTTGAACCCCGAACACGGATTTCCCGTGGTTTTGCATTT
GTTACGATGGACAATGTTGATGATGCTAATCGGTGTGTTAAGCATCTCAACCAGTCAATTCTAGAAGGTCGATATATAACTGTGGAGAAGTCACGGAGGAAACGGCCAAG
AACTCCAACGCCTGGACACTATTTGGGGTTGAAAAGCACTAGAGACTCTGGCTACCGTGGCGATCGAGGTCGGTACCGTGGTGGCTCCCTCCGTGAAGACTATGGATATC
GTCGGTCTCCAAGACGCTCGCCATATCGAGGGGCTCGAGAGTACTCCCCTAGACACTCCCCCCCTTATGGTGGAAGATCAAGGAGGGATCACTCGAGGTCGCCTCCTTAC
TCTCCTCCTTATGGCAGCCCGGATAGGAGGTATCCTCGTGGCTCTAGGTGA
Protein sequenceShow/hide protein sequence
MADSHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRENSLNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAF
VTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGRYRGGSLREDYGYRRSPRRSPYRGAREYSPRHSPPYGGRSRRDHSRSPPY
SPPYGSPDRRYPRGSR