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Lag0013545 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0013545
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr1:51143299..51143652
RNA-Seq ExpressionLag0013545
SyntenyLag0013545
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7801271.1 reverse transcriptase [Senna tora]2.5e-0841.94Show/hide
Query:  WIPPLANFWKMKADASWSSYPPSTGIGVIFKDSEGAIRGTISSYIDVDYLGQN--AELWAIVDGLKMAVNLGCENLIVESDSLMAINLINKKS
        W PP   +WK+  D S        G G + +DS G      S ++     G N  AELWAI +GLK+A +L C +LIVESDSL  +NLIN  +
Subjt:  WIPPLANFWKMKADASWSSYPPSTGIGVIFKDSEGAIRGTISSYIDVDYLGQN--AELWAIVDGLKMAVNLGCENLIVESDSLMAINLINKKS

KAF7823154.1 putative WRKY transcription factor 31 [Senna tora]2.6e-1039.5Show/hide
Query:  MIPNHCWIPPLANFWKMKADASWSSYPPSTGIGVIFKDSEGAIRGTISSYIDVDYLGQNAELWAIVDGLKMAVNLGCENLIVESDSLMAINLINKKSDQW
        +I N  W PPL  +WK+  D + S  P    IG I ++  G      S Y+        AELWAI  G+K+A NLGC++L +ESDSL+A NL+   S   
Subjt:  MIPNHCWIPPLANFWKMKADASWSSYPPSTGIGVIFKDSEGAIRGTISSYIDVDYLGQNAELWAIVDGLKMAVNLGCENLIVESDSLMAINLINKKSDQW

Query:  GRSRG----FSRIDLGNHL
          S G    F+R   GN L
Subjt:  GRSRG----FSRIDLGNHL

KAF7828542.1 reverse transcriptase [Senna tora]2.6e-1044.32Show/hide
Query:  WIPPLANFWKMKADASWSSYPPSTGIGVIFKDSEGAIRGTISSYIDVDYLGQNAELWAIVDGLKMAVNLGCENLIVESDSLMAINLIN
        W PP  N+WK+  D + S  P    IG + +D  G      SS+I    +   AE+WAI+ GLK+A+NL C  L VESDSL+A+NL+N
Subjt:  WIPPLANFWKMKADASWSSYPPSTGIGVIFKDSEGAIRGTISSYIDVDYLGQNAELWAIVDGLKMAVNLGCENLIVESDSLMAINLIN

KAF7830619.1 Trimethylguanosine synthase [Senna tora]2.2e-0942.53Show/hide
Query:  WIPPLANFWKMKADASWSSYPPSTGIGVIFKDSEGAIRGTISSYIDVDYLGQNAELWAIVDGLKMAVNLGCENLIVESDSLMAINLI
        W PP+AN+WK+  D + S  P    IG I +D  G+     SSYI        AELWAI  GL++A++L C  + VESDSL+A+  +
Subjt:  WIPPLANFWKMKADASWSSYPPSTGIGVIFKDSEGAIRGTISSYIDVDYLGQNAELWAIVDGLKMAVNLGCENLIVESDSLMAINLI

KAF7844846.1 reverse transcriptase [Senna tora]1.7e-0942.05Show/hide
Query:  WIPPLANFWKMKADASWSSYPPSTGIGVIFKDSEGAIRGTISSYIDVDYLGQNAELWAIVDGLKMAVNLGCENLIVESDSLMAINLIN
        W PP  N+WK+  + + S  P    IG + ++  G      SS+I  D     AELWAI  GL MA++L C  + VESDSL+A+NL+N
Subjt:  WIPPLANFWKMKADASWSSYPPSTGIGVIFKDSEGAIRGTISSYIDVDYLGQNAELWAIVDGLKMAVNLGCENLIVESDSLMAINLIN

TrEMBL top hitse value%identityAlignment
A0A1R3GKQ5 Reverse transcriptase7.7e-0842.39Show/hide
Query:  WIPPLANFWKMKADASWSSYPPSTGIGVIFKDSEGAI--RGTISSYIDVDYLGQNAELWAIVDGLKMAVNLGCENLIVESDSLMAINLINKK
        WI P    WK+  DAS+SS     G+GV+ +D EG I   G    +   D L  +AE+ AI+ G ++A+  G    I+ESDSL+AI+ INKK
Subjt:  WIPPLANFWKMKADASWSSYPPSTGIGVIFKDSEGAI--RGTISSYIDVDYLGQNAELWAIVDGLKMAVNLGCENLIVESDSLMAINLINKK

A0A444Y3L5 RNase H domain-containing protein3.8e-0739.33Show/hide
Query:  WIPPLANFWKMKADASWSSYPPSTGIGVIFKDSEGAIRGTISSYIDVDYLGQNAELWAIVDGLKMAVNLGCENLIVESDSLMAINLINK
        W  P     K+  D SW  +  +T  G +F+DS G      S  +    +  +AELWA++ GL +A   G +NLIVESDS  AIN IN+
Subjt:  WIPPLANFWKMKADASWSSYPPSTGIGVIFKDSEGAIRGTISSYIDVDYLGQNAELWAIVDGLKMAVNLGCENLIVESDSLMAINLINK

A0A444ZTZ6 RNase H domain-containing protein4.5e-0840.91Show/hide
Query:  WIPPLANFWKMKADASWSSYPPSTGIGVIFKDSEGAIRGTISSYIDVDYLGQNAELWAIVDGLKMAVNLGCENLIVESDSLMAINLIN
        W  P   + K+  D SW  +  +   G +F+DS G      SS +  +Y   +AELWA++ GL +A   G +NLIVESDS  AIN IN
Subjt:  WIPPLANFWKMKADASWSSYPPSTGIGVIFKDSEGAIRGTISSYIDVDYLGQNAELWAIVDGLKMAVNLGCENLIVESDSLMAINLIN

A0A445DPD5 RNase H domain-containing protein7.7e-0838.04Show/hide
Query:  WIPPLANFWKMKADASWSSYPPSTGIGVIFKDSEGA-IRGTISSYIDVDYLGQNAELWAIVDGLKMAVNLGCENLIVESDSLMAINLINKKS
        W+ P   + K+  D SW ++  +   G +F+DS G  ++G   +  +   +  +AELWAIV GL +A+  G +NL+VESDS+ AIN I   S
Subjt:  WIPPLANFWKMKADASWSSYPPSTGIGVIFKDSEGA-IRGTISSYIDVDYLGQNAELWAIVDGLKMAVNLGCENLIVESDSLMAINLINKKS

A0A445E9T0 RNase H domain-containing protein2.9e-0738.04Show/hide
Query:  WIPPLANFWKMKADASWSSYPPSTGIGVIFKDSEGA-IRGTISSYIDVDYLGQNAELWAIVDGLKMAVNLGCENLIVESDSLMAINLINKKS
        W+ P   + K+  D SW ++  +   G +F+DS G  + G   +  +   +  +AELWAIV GL +A+  G +NL+VESDS+ AIN I   S
Subjt:  WIPPLANFWKMKADASWSSYPPSTGIGVIFKDSEGA-IRGTISSYIDVDYLGQNAELWAIVDGLKMAVNLGCENLIVESDSLMAINLINKKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCCCGAATCACTGTTGGATTCCTCCCCTTGCTAATTTTTGGAAAATGAAAGCAGATGCTTCGTGGAGTTCATACCCTCCCTCAACTGGAATAGGTGTTATTTTTAA
GGATTCAGAAGGAGCTATTAGAGGGACAATAAGTTCTTACATTGACGTGGATTATTTGGGCCAAAATGCTGAATTATGGGCCATAGTTGATGGATTAAAGATGGCTGTAA
ATTTGGGCTGTGAAAACTTGATTGTGGAATCTGATAGTTTGATGGCCATAAATCTCATCAATAAAAAATCAGATCAATGGGGGAGAAGCAGAGGTTTTTCTAGAATAGAT
TTGGGCAATCATCTCATCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCCCGAATCACTGTTGGATTCCTCCCCTTGCTAATTTTTGGAAAATGAAAGCAGATGCTTCGTGGAGTTCATACCCTCCCTCAACTGGAATAGGTGTTATTTTTAA
GGATTCAGAAGGAGCTATTAGAGGGACAATAAGTTCTTACATTGACGTGGATTATTTGGGCCAAAATGCTGAATTATGGGCCATAGTTGATGGATTAAAGATGGCTGTAA
ATTTGGGCTGTGAAAACTTGATTGTGGAATCTGATAGTTTGATGGCCATAAATCTCATCAATAAAAAATCAGATCAATGGGGGAGAAGCAGAGGTTTTTCTAGAATAGAT
TTGGGCAATCATCTCATCTTCTAG
Protein sequenceShow/hide protein sequence
MIPNHCWIPPLANFWKMKADASWSSYPPSTGIGVIFKDSEGAIRGTISSYIDVDYLGQNAELWAIVDGLKMAVNLGCENLIVESDSLMAINLINKKSDQWGRSRGFSRID
LGNHLIF