; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0013557 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0013557
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionF-box family protein with a domain of unknown function (DUF295)
Genome locationchr1:51184836..51185147
RNA-Seq ExpressionLag0013557
SyntenyLag0013557
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603875.1 putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia]8.2e-1650.43Show/hide
Query:  DAGVQWSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSVPPLPK--------------HLLLFVSDFPPQ------PPL--QISPSTPSSPKAPSIVS
        D GV+WSELPP IWS VGKHLHNYIDAVRFRSVCRSWRSSVPP+PK                 LFV  F  Q       PL  + SP++ SS +   +V 
Subjt:  DAGVQWSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSVPPLPK--------------HLLLFVSDFPPQ------PPL--QISPSTPSSPKAPSIVS

Query:  LLSTTNQALTFPHPL
        L  +    + F HPL
Subjt:  LLSTTNQALTFPHPL

XP_022950355.1 uncharacterized protein LOC111453467 [Cucurbita moschata]4.1e-1549.57Show/hide
Query:  DAGVQWSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSVPPLPK--------------HLLLFVSDFPPQ------PPL--QISPSTPSSPKAPSIVS
        D GV+WSELPP IW  VGKHLHNYIDAVRFRSVCRSWRSSVPP+PK                 LFV  F  Q       PL  + SP++ SS +   +V 
Subjt:  DAGVQWSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSVPPLPK--------------HLLLFVSDFPPQ------PPL--QISPSTPSSPKAPSIVS

Query:  LLSTTNQALTFPHPL
        L  +    + F HPL
Subjt:  LLSTTNQALTFPHPL

XP_022978053.1 putative F-box protein At1g65770 [Cucurbita maxima]3.1e-1548.74Show/hide
Query:  DAGVQWSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSVPPLPK--------------HLLLFVSDFPPQ------PPL--QISPSTPSSPKAPSIVS
        D GV+WSELPP IWS VGKHLHNYIDAVRFRSVCRSWRSSVPP+PK                 LFV  F  Q       PL  + SP++ S  +   +V 
Subjt:  DAGVQWSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSVPPLPK--------------HLLLFVSDFPPQ------PPL--QISPSTPSSPKAPSIVS

Query:  LLSTTNQALTFPHPLPLAR
        L  +    + F HPL   R
Subjt:  LLSTTNQALTFPHPLPLAR

XP_023543888.1 putative F-box protein At1g65770 [Cucurbita pepo subsp. pepo]1.1e-1549.57Show/hide
Query:  DAGVQWSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSVPPLPK--------------HLLLFVSDFPPQ------PPL--QISPSTPSSPKAPSIVS
        D GV+WSELPP IWS VGKHLHNYIDAVRFRSVCRSWRSSVPP+PK                 LFV  F  Q       PL  + SP++ SS +   +V 
Subjt:  DAGVQWSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSVPPLPK--------------HLLLFVSDFPPQ------PPL--QISPSTPSSPKAPSIVS

Query:  LLSTTNQALTFPHPL
        +  +    + F HPL
Subjt:  LLSTTNQALTFPHPL

XP_038876198.1 F-box protein At2g26160-like [Benincasa hispida]7.0e-1577.08Show/hide
Query:  MDDAGVQWSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSVPPLPK
        MDD GV+WSELPP IWS VG++LHNYID VRFRSVCRSWRSS+ P P+
Subjt:  MDDAGVQWSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSVPPLPK

TrEMBL top hitse value%identityAlignment
A0A0A0KLM6 DUF295 domain-containing protein3.4e-1556.98Show/hide
Query:  MDDAGVQWSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSVPPLPKHLLLFVSDFPPQPPLQIS-PSTPSSPKAPSIVSLLSTT
        MDDAGV WSELPP IW  VGKHLHNYID +RFRSVCRSWRSS+PP  +            PPL +  PS   SP  P    L  TT
Subjt:  MDDAGVQWSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSVPPLPKHLLLFVSDFPPQPPLQIS-PSTPSSPKAPSIVSLLSTT

A0A1S3CRG5 putative F-box protein At1g657706.4e-1452.94Show/hide
Query:  MDDAGVQWSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSVPPLPKHLLLFVSDFPPQPPLQISPSTPSSPKAPSIVSLLSTT
        MDDAGV WSELPP IW  VGKHLH YID +RFRSVCRSWRSS+PP  +            PPL +   +P      S+ + LS T
Subjt:  MDDAGVQWSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSVPPLPKHLLLFVSDFPPQPPLQISPSTPSSPKAPSIVSLLSTT

A0A5A7VPR3 Putative F-box protein6.4e-1452.94Show/hide
Query:  MDDAGVQWSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSVPPLPKHLLLFVSDFPPQPPLQISPSTPSSPKAPSIVSLLSTT
        MDDAGV WSELPP IW  VGKHLH YID +RFRSVCRSWRSS+PP  +            PPL +   +P      S+ + LS T
Subjt:  MDDAGVQWSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSVPPLPKHLLLFVSDFPPQPPLQISPSTPSSPKAPSIVSLLSTT

A0A6J1GFH5 uncharacterized protein LOC1114534672.0e-1549.57Show/hide
Query:  DAGVQWSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSVPPLPK--------------HLLLFVSDFPPQ------PPL--QISPSTPSSPKAPSIVS
        D GV+WSELPP IW  VGKHLHNYIDAVRFRSVCRSWRSSVPP+PK                 LFV  F  Q       PL  + SP++ SS +   +V 
Subjt:  DAGVQWSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSVPPLPK--------------HLLLFVSDFPPQ------PPL--QISPSTPSSPKAPSIVS

Query:  LLSTTNQALTFPHPL
        L  +    + F HPL
Subjt:  LLSTTNQALTFPHPL

A0A6J1IRW4 putative F-box protein At1g657701.5e-1548.74Show/hide
Query:  DAGVQWSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSVPPLPK--------------HLLLFVSDFPPQ------PPL--QISPSTPSSPKAPSIVS
        D GV+WSELPP IWS VGKHLHNYIDAVRFRSVCRSWRSSVPP+PK                 LFV  F  Q       PL  + SP++ S  +   +V 
Subjt:  DAGVQWSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSVPPLPK--------------HLLLFVSDFPPQ------PPL--QISPSTPSSPKAPSIVS

Query:  LLSTTNQALTFPHPLPLAR
        L  +    + F HPL   R
Subjt:  LLSTTNQALTFPHPLPLAR

SwissProt top hitse value%identityAlignment
Q3EBY8 F-box protein At2g176904.4e-0440.48Show/hide
Query:  WSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSVPPLPKH
        WS+LP  +   +   L++ I+ +RFRS+C+SWRSS   + K+
Subjt:  WSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSVPPLPKH

Q3EBZ2 F-box protein SKIP231.8e-0542.59Show/hide
Query:  VQWSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSV---PPLPKHLLLFVSD
        V WS LP  +   + K L +  D ++FRSVC SWRS+     PLP H L  + D
Subjt:  VQWSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSV---PPLPKHLLLFVSD

Q9SHX9 Putative F-box protein At1g657705.7e-0437.88Show/hide
Query:  WSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSVPPLPKHLLLFVSDFPPQPPLQISPSTPSSP
        WS LP  + + +   L + I+  RFRS+CRSWRSSVP   K      + F  +P + ++P+ P+ P
Subjt:  WSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSVPPLPKHLLLFVSDFPPQPPLQISPSTPSSP

Q9SIX0 Putative F-box protein At2g162908.9e-0553.85Show/hide
Query:  WSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSVPPL
        WS LP  +   +  HL    + V FRSVCRSWRS VPPL
Subjt:  WSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSVPPL

Q9ZUH0 F-box/kelch-repeat protein At2g242502.6e-0445.45Show/hide
Query:  WSELPPGIWSEVGKHLH-NYIDAVRFRSVCRSWRSSVPPLPKHLLLFVSDFPPQP
        WS+LP  +   +  HL  +Y DAV  RSVCRSWRS+  P P  LL      P  P
Subjt:  WSELPPGIWSEVGKHLH-NYIDAVRFRSVCRSWRSSVPPLPKHLLLFVSDFPPQP

Arabidopsis top hitse value%identityAlignment
AT2G16290.1 F-box family protein with a domain of unknown function (DUF295)6.3e-0653.85Show/hide
Query:  WSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSVPPL
        WS LP  +   +  HL    + V FRSVCRSWRS VPPL
Subjt:  WSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSVPPL

AT2G17030.1 F-box family protein with a domain of unknown function (DUF295)1.3e-0642.59Show/hide
Query:  VQWSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSV---PPLPKHLLLFVSD
        V WS LP  +   + K L +  D ++FRSVC SWRS+     PLP H L  + D
Subjt:  VQWSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSV---PPLPKHLLLFVSD

AT2G17690.1 F-box family protein with a domain of unknown function (DUF295)3.1e-0540.48Show/hide
Query:  WSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSVPPLPKH
        WS+LP  +   +   L++ I+ +RFRS+C+SWRSS   + K+
Subjt:  WSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSVPPLPKH

AT2G24250.1 Protein of unknown function (DUF295)1.8e-0545.45Show/hide
Query:  WSELPPGIWSEVGKHLH-NYIDAVRFRSVCRSWRSSVPPLPKHLLLFVSDFPPQP
        WS+LP  +   +  HL  +Y DAV  RSVCRSWRS+  P P  LL      P  P
Subjt:  WSELPPGIWSEVGKHLH-NYIDAVRFRSVCRSWRSSVPPLPKHLLLFVSDFPPQP

AT2G24250.2 Protein of unknown function (DUF295)1.8e-0545.45Show/hide
Query:  WSELPPGIWSEVGKHLH-NYIDAVRFRSVCRSWRSSVPPLPKHLLLFVSDFPPQP
        WS+LP  +   +  HL  +Y DAV  RSVCRSWRS+  P P  LL      P  P
Subjt:  WSELPPGIWSEVGKHLH-NYIDAVRFRSVCRSWRSSVPPLPKHLLLFVSDFPPQP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGACGCCGGAGTGCAGTGGTCGGAACTCCCGCCGGGAATCTGGTCGGAAGTCGGAAAACACCTCCACAACTACATCGACGCCGTCCGATTTCGCAGCGTTTGCCG
ATCGTGGCGGTCCTCTGTTCCTCCTCTCCCCAAACATCTCCTCCTCTTCGTCTCCGATTTCCCTCCCCAACCACCACTTCAAATCTCTCCGTCGACGCCTTCCTCTCCCA
AAGCACCGTCTATCGTCTCGCTCCTCTCGACCACGAACCAAGCCCTAACGTTTCCTCATCCTCTTCCCCTCGCCAGAACGGCCGTCTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGACGCCGGAGTGCAGTGGTCGGAACTCCCGCCGGGAATCTGGTCGGAAGTCGGAAAACACCTCCACAACTACATCGACGCCGTCCGATTTCGCAGCGTTTGCCG
ATCGTGGCGGTCCTCTGTTCCTCCTCTCCCCAAACATCTCCTCCTCTTCGTCTCCGATTTCCCTCCCCAACCACCACTTCAAATCTCTCCGTCGACGCCTTCCTCTCCCA
AAGCACCGTCTATCGTCTCGCTCCTCTCGACCACGAACCAAGCCCTAACGTTTCCTCATCCTCTTCCCCTCGCCAGAACGGCCGTCTGGTGA
Protein sequenceShow/hide protein sequence
MDDAGVQWSELPPGIWSEVGKHLHNYIDAVRFRSVCRSWRSSVPPLPKHLLLFVSDFPPQPPLQISPSTPSSPKAPSIVSLLSTTNQALTFPHPLPLARTAVW