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Lag0013575 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0013575
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionEndochitinase (Chitinase)
Genome locationchr1:51335355..51336143
RNA-Seq ExpressionLag0013575
SyntenyLag0013575
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0006032 - chitin catabolic process (biological process)
GO:0006952 - defense response (biological process)
GO:0016998 - cell wall macromolecule catabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004568 - chitinase activity (molecular function)
GO:0008061 - chitin binding (molecular function)
InterPro domainsIPR000726 - Glycoside hydrolase, family 19, catalytic
IPR023346 - Lysozyme-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594739.1 hypothetical protein SDJN03_11292, partial [Cucurbita argyrosperma subsp. sororia]5.8e-2489.09Show/hide
Query:  NETTGGWPTAPDGPYAWGYCFVRELQQDVYCR-PDPQWPCAPSQRYFGRGPIQLT
        +ETTGGWPTAPDGPYAWGYCFVRELQQD YCR PDP+WPCAP Q+YFGRGPIQLT
Subjt:  NETTGGWPTAPDGPYAWGYCFVRELQQDVYCR-PDPQWPCAPSQRYFGRGPIQLT

XP_022132794.1 endochitinase A-like [Momordica charantia]3.5e-2179.63Show/hide
Query:  NETTGGWPTAPDGPYAWGYCFVRELQQDVYCRPDPQWPCAPSQRYFGRGPIQLT
        +ETTGGW TAPDGPYAWGYCF+RE  QDVYC P  QWPCAP Q+Y+GRGPIQLT
Subjt:  NETTGGWPTAPDGPYAWGYCFVRELQQDVYCRPDPQWPCAPSQRYFGRGPIQLT

XP_022926868.1 endochitinase-like [Cucurbita moschata]5.8e-2489.09Show/hide
Query:  NETTGGWPTAPDGPYAWGYCFVRELQQDVYCR-PDPQWPCAPSQRYFGRGPIQLT
        +ETTGGWPTAPDGPYAWGYCFVRELQQD YCR PDP+WPCAP Q+YFGRGPIQLT
Subjt:  NETTGGWPTAPDGPYAWGYCFVRELQQDVYCR-PDPQWPCAPSQRYFGRGPIQLT

XP_023003944.1 endochitinase-like [Cucurbita maxima]1.7e-2387.27Show/hide
Query:  NETTGGWPTAPDGPYAWGYCFVRELQQDVYCR-PDPQWPCAPSQRYFGRGPIQLT
        +ETTGGWPTAPDGPYAWGYCFVREL+QD YCR PDP+WPCAP Q+YFGRGPIQLT
Subjt:  NETTGGWPTAPDGPYAWGYCFVRELQQDVYCR-PDPQWPCAPSQRYFGRGPIQLT

XP_023518615.1 endochitinase-like [Cucurbita pepo subsp. pepo]4.9e-2387.27Show/hide
Query:  NETTGGWPTAPDGPYAWGYCFVRELQQDVYCRP-DPQWPCAPSQRYFGRGPIQLT
        +ETTGGWPTAPDGPYAWGYCFVRELQQD YCR  DP+WPCAP Q+YFGRGPIQLT
Subjt:  NETTGGWPTAPDGPYAWGYCFVRELQQDVYCRP-DPQWPCAPSQRYFGRGPIQLT

TrEMBL top hitse value%identityAlignment
A0A6J1BU42 endochitinase A-like1.7e-2179.63Show/hide
Query:  NETTGGWPTAPDGPYAWGYCFVRELQQDVYCRPDPQWPCAPSQRYFGRGPIQLT
        +ETTGGW TAPDGPYAWGYCF+RE  QDVYC P  QWPCAP Q+Y+GRGPIQLT
Subjt:  NETTGGWPTAPDGPYAWGYCFVRELQQDVYCRPDPQWPCAPSQRYFGRGPIQLT

A0A6J1BUG0 LOW QUALITY PROTEIN: endochitinase-like1.7e-2180Show/hide
Query:  NETTGGWPTAPDGPYAWGYCFVRELQQDVYCRPDPQWPCAPSQRYFGRGPIQLTQ
        +ETTGGWPTAP GPYAWGYCFVREL QD+YCRPD QWPCA  QRY+GRGPI+  Q
Subjt:  NETTGGWPTAPDGPYAWGYCFVRELQQDVYCRPDPQWPCAPSQRYFGRGPIQLTQ

A0A6J1EJE5 endochitinase-like2.8e-2489.09Show/hide
Query:  NETTGGWPTAPDGPYAWGYCFVRELQQDVYCR-PDPQWPCAPSQRYFGRGPIQLT
        +ETTGGWPTAPDGPYAWGYCFVRELQQD YCR PDP+WPCAP Q+YFGRGPIQLT
Subjt:  NETTGGWPTAPDGPYAWGYCFVRELQQDVYCR-PDPQWPCAPSQRYFGRGPIQLT

A0A6J1ILX6 chitinase 1-like3.8e-2177.78Show/hide
Query:  NETTGGWPTAPDGPYAWGYCFVRELQQDVYCRPDPQWPCAPSQRYFGRGPIQLT
        +ETTGGW TAPDGPYAWGYCF+RE+ QDVYC P+ QWPCA  Q+Y+GRGPIQLT
Subjt:  NETTGGWPTAPDGPYAWGYCFVRELQQDVYCRPDPQWPCAPSQRYFGRGPIQLT

A0A6J1KUS6 endochitinase-like8.2e-2487.27Show/hide
Query:  NETTGGWPTAPDGPYAWGYCFVRELQQDVYCR-PDPQWPCAPSQRYFGRGPIQLT
        +ETTGGWPTAPDGPYAWGYCFVREL+QD YCR PDP+WPCAP Q+YFGRGPIQLT
Subjt:  NETTGGWPTAPDGPYAWGYCFVRELQQDVYCR-PDPQWPCAPSQRYFGRGPIQLT

SwissProt top hitse value%identityAlignment
P06215 Endochitinase3.1e-2070.37Show/hide
Query:  NETTGGWPTAPDGPYAWGYCFVRELQQDVYCRPDPQWPCAPSQRYFGRGPIQLT
        +ETTGGW TAPDGPYAWGYCFVRE     YC   PQ+PCAP Q+Y+GRGPIQ++
Subjt:  NETTGGWPTAPDGPYAWGYCFVRELQQDVYCRPDPQWPCAPSQRYFGRGPIQLT

P36361 Endochitinase CH5B3.1e-2070.37Show/hide
Query:  NETTGGWPTAPDGPYAWGYCFVRELQQDVYCRPDPQWPCAPSQRYFGRGPIQLT
        +ETTGGW TAPDGPYAWGYCFVRE     YC   PQ+PCAP Q+Y+GRGPIQ++
Subjt:  NETTGGWPTAPDGPYAWGYCFVRELQQDVYCRPDPQWPCAPSQRYFGRGPIQLT

P52403 Endochitinase 1 (Fragment)3.1e-2070.91Show/hide
Query:  NETTGGWPTAPDGPYAWGYCFVREL-QQDVYCRPDPQWPCAPSQRYFGRGPIQLT
        +ETTGGWPTAPDGPYAWGYCF+RE      YC P  QWPCAP ++YFGRGPIQ++
Subjt:  NETTGGWPTAPDGPYAWGYCFVREL-QQDVYCRPDPQWPCAPSQRYFGRGPIQLT

P52406 Endochitinase 4 (Fragment)4.1e-2070.91Show/hide
Query:  NETTGGWPTAPDGPYAWGYCFVREL-QQDVYCRPDPQWPCAPSQRYFGRGPIQLT
        +ETTGGWPTAPDGPYAWGYCF+RE      YC P  QWPCAP ++YFGRGPIQ++
Subjt:  NETTGGWPTAPDGPYAWGYCFVREL-QQDVYCRPDPQWPCAPSQRYFGRGPIQLT

Q05538 Basic 30 kDa endochitinase3.1e-2070.91Show/hide
Query:  NETTGGWPTAPDGPYAWGYCFVREL-QQDVYCRPDPQWPCAPSQRYFGRGPIQLT
        +ETTGGWPTAPDGPYAWGYCF+RE      YC P  QWPCAP ++YFGRGPIQ++
Subjt:  NETTGGWPTAPDGPYAWGYCFVREL-QQDVYCRPDPQWPCAPSQRYFGRGPIQLT

Arabidopsis top hitse value%identityAlignment
AT1G02360.1 Chitinase family protein9.6e-1764.29Show/hide
Query:  NETTGGWPTAPDGPYAWGYCFVRELQ-QDVYC-RPDPQWPCAPSQRYFGRGPIQLT
        +ETTGGW TAPDGPYAWG CF  E+  Q  YC   D QWPC P++ Y GRGPIQL+
Subjt:  NETTGGWPTAPDGPYAWGYCFVRELQ-QDVYC-RPDPQWPCAPSQRYFGRGPIQLT

AT2G43610.1 Chitinase family protein2.6e-0644.44Show/hide
Query:  YCFVRELQQDVYCRPDPQWPCAPSQRYFGRGPIQLT
        +C+  E+ +  YC P   +PC P + Y+GRGPIQ+T
Subjt:  YCFVRELQQDVYCRPDPQWPCAPSQRYFGRGPIQLT

AT2G43620.1 Chitinase family protein2.6e-0644.44Show/hide
Query:  YCFVRELQQDVYCRPDPQWPCAPSQRYFGRGPIQLT
        +C+  E+ +  YC P   +PC P + Y+GRGPIQ+T
Subjt:  YCFVRELQQDVYCRPDPQWPCAPSQRYFGRGPIQLT

AT3G12500.1 basic chitinase8.7e-1861.82Show/hide
Query:  NETTGGWPTAPDGPYAWGYCFVRELQ-QDVYCRPDPQWPCAPSQRYFGRGPIQLT
        +ETTGGW TAPDGPY+WGYCF +E      YC P   WPCA  +RY+GRGP+QL+
Subjt:  NETTGGWPTAPDGPYAWGYCFVRELQ-QDVYCRPDPQWPCAPSQRYFGRGPIQLT

AT4G01700.1 Chitinase family protein2.0e-1458.93Show/hide
Query:  NETTGGWPTAPDGPYAWGYCFVRELQ-QDVYC-RPDPQWPCAPSQRYFGRGPIQLT
        +ETTGGW TAPDGPYAWG CF  E+  Q  YC   +  WPC   + Y GRGPIQL+
Subjt:  NETTGGWPTAPDGPYAWGYCFVRELQ-QDVYC-RPDPQWPCAPSQRYFGRGPIQLT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGTCAAAATGGTCTGTGTTGCAGCGAGCACGGGTGGTGCGGCACCACCGAACCCTACTGCGGGGCCGGTTGTCAAAGCCAGTGCCGTGGCTCGGGCCCTGTCGGA
TCTGGCATCGGCAGGATCGTCACCGCCTCCGTCTTCGACCAAATGCTCAAGTATCGTAACGATCCACGTTGTCGTGGTAATGGGTTCTATAGCTACGATGCTTTTCTTAC
TGCTGCTCGATCCTTTCCTGGGTTTGGTACGACTGGAGACGATGCTACTCAAAGAAGGGAGTTGGCAGCTTTTCTTGCTCAAACTTCTCACGAGACTACCGGTTAACGAG
ACTACCGGAGGATGGCCAACTGCACCAGATGGTCCATATGCATGGGGATATTGTTTCGTTAGGGAACTCCAACAGGATGTCTACTGCAGGCCTGATCCACAATGGCCTTG
CGCTCCTAGTCAAAGATATTTTGGTCGTGGACCCATTCAACTCACTCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGTCAAAATGGTCTGTGTTGCAGCGAGCACGGGTGGTGCGGCACCACCGAACCCTACTGCGGGGCCGGTTGTCAAAGCCAGTGCCGTGGCTCGGGCCCTGTCGGA
TCTGGCATCGGCAGGATCGTCACCGCCTCCGTCTTCGACCAAATGCTCAAGTATCGTAACGATCCACGTTGTCGTGGTAATGGGTTCTATAGCTACGATGCTTTTCTTAC
TGCTGCTCGATCCTTTCCTGGGTTTGGTACGACTGGAGACGATGCTACTCAAAGAAGGGAGTTGGCAGCTTTTCTTGCTCAAACTTCTCACGAGACTACCGGTTAACGAG
ACTACCGGAGGATGGCCAACTGCACCAGATGGTCCATATGCATGGGGATATTGTTTCGTTAGGGAACTCCAACAGGATGTCTACTGCAGGCCTGATCCACAATGGCCTTG
CGCTCCTAGTCAAAGATATTTTGGTCGTGGACCCATTCAACTCACTCAGTAA
Protein sequenceShow/hide protein sequence
MFVKMVCVAASTGGAAPPNPTAGPVVKASAVARALSDLASAGSSPPPSSTKCSSIVTIHVVVVMGSIATMLFLLLLDPFLGLVRLETMLLKEGSWQLFLLKLLTRLPVNE
TTGGWPTAPDGPYAWGYCFVRELQQDVYCRPDPQWPCAPSQRYFGRGPIQLTQ