; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0013585 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0013585
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionHeterogeneous nuclear ribonucleoprotein H2 isoform X1
Genome locationchr1:51399097..51400015
RNA-Seq ExpressionLag0013585
SyntenyLag0013585
Gene Ontology termsGO:1990904 - ribonucleoprotein complex (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025609.1 heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Cucumis melo var. makuwa]6.6e-12997.89Show/hide
Query:  MMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE
        MMEP PYFAVSSSTAGFQPYGYGSFPPT AFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE
Subjt:  MMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE

Query:  VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAE
        VFRCKRQDYYNA+AAEVNYEGIYDNDYHGSPPPRQKRF+DKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDL EDRIHIASRPDGKATGEAYVEFASAE
Subjt:  VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAE

Query:  EAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        EAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

XP_004134826.1 heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Cucumis sativus]5.0e-12998.31Show/hide
Query:  MMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE
        MMEP PYFAVSSSTAGFQPYGYGSFPPT AFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE
Subjt:  MMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE

Query:  VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAE
        VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRF+DKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDL EDRIHIASRPDGKATGEAYVEFASAE
Subjt:  VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAE

Query:  EAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        EAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

XP_008440908.1 PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Cucumis melo]6.6e-12997.89Show/hide
Query:  MMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE
        MMEP PYFAVSSSTAGFQPYGYGSFPPT AFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE
Subjt:  MMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE

Query:  VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAE
        VFRCKRQDYYNA+AAEVNYEGIYDNDYHGSPPPRQKRF+DKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDL EDRIHIASRPDGKATGEAYVEFASAE
Subjt:  VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAE

Query:  EAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        EAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

XP_022133202.1 heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Momordica charantia]6.6e-12997.47Show/hide
Query:  MMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE
        MMEP PYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS+QVEFALQRDRQNMGRRYVE
Subjt:  MMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE

Query:  VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAE
        VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRF+DKDQMEYTEILKLRGLPFSVTKSNI EFFGEFDLTEDR+HIASRPDGKATGEAYVEFASAE
Subjt:  VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAE

Query:  EAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        EAKRAMSKDKM IGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

XP_038882740.1 heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Benincasa hispida]1.1e-12897.89Show/hide
Query:  MMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE
        MMEP PYFAVSSSTAGFQPYGYGSFPPT AFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE
Subjt:  MMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE

Query:  VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAE
        VFRCKRQDYYNAVA+EVNYEGIYDNDYHGSPPPRQKRF+DKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDL EDRIHIASRPDGKATGEAYVEFASAE
Subjt:  VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAE

Query:  EAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        EAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

TrEMBL top hitse value%identityAlignment
A0A0A0KJN7 RRM domain-containing protein2.4e-12998.31Show/hide
Query:  MMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE
        MMEP PYFAVSSSTAGFQPYGYGSFPPT AFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE
Subjt:  MMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE

Query:  VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAE
        VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRF+DKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDL EDRIHIASRPDGKATGEAYVEFASAE
Subjt:  VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAE

Query:  EAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        EAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

A0A1S4DTH1 heterogeneous nuclear ribonucleoprotein H2 isoform X13.2e-12997.89Show/hide
Query:  MMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE
        MMEP PYFAVSSSTAGFQPYGYGSFPPT AFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE
Subjt:  MMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE

Query:  VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAE
        VFRCKRQDYYNA+AAEVNYEGIYDNDYHGSPPPRQKRF+DKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDL EDRIHIASRPDGKATGEAYVEFASAE
Subjt:  VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAE

Query:  EAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        EAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

A0A5D3CN28 Heterogeneous nuclear ribonucleoprotein H2 isoform X13.2e-12997.89Show/hide
Query:  MMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE
        MMEP PYFAVSSSTAGFQPYGYGSFPPT AFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE
Subjt:  MMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE

Query:  VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAE
        VFRCKRQDYYNA+AAEVNYEGIYDNDYHGSPPPRQKRF+DKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDL EDRIHIASRPDGKATGEAYVEFASAE
Subjt:  VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAE

Query:  EAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        EAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

A0A6J1BYF3 heterogeneous nuclear ribonucleoprotein H2 isoform X13.2e-12997.47Show/hide
Query:  MMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE
        MMEP PYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS+QVEFALQRDRQNMGRRYVE
Subjt:  MMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE

Query:  VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAE
        VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRF+DKDQMEYTEILKLRGLPFSVTKSNI EFFGEFDLTEDR+HIASRPDGKATGEAYVEFASAE
Subjt:  VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAE

Query:  EAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        EAKRAMSKDKM IGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

A0A6J1IJJ3 heterogeneous nuclear ribonucleoprotein H-like isoform X19.6e-12695.78Show/hide
Query:  MMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE
        MMEP PYFAVSSSTAGFQPYGYGSFPPT AFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS+QVEFALQRDRQNMGRRYVE
Subjt:  MMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE

Query:  VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAE
        VF CKRQDYYNAVAAEVNYEGIY+NDY+GSPPPRQKR +DKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDL E+RIHIASRPDGKATGEAYVEFASAE
Subjt:  VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAE

Query:  EAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        EAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

SwissProt top hitse value%identityAlignment
P52597 Heterogeneous nuclear ribonucleoprotein F1.3e-2636.63Show/hide
Query:  VVRLRGLPFNCTDIDIFKFFAGLDIVD-----VLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY
        VV+LRGLP++C+  D+  F +   I D       +  + GR  GEAFV       V+ AL++DR++MG RY+EVF+  R +               D   
Subjt:  VVRLRGLPFNCTDIDIFKFFAGLDIVD-----VLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY

Query:  HGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNE
          S P      ND         ++LRGLPF  TK  I++FF   ++  + I +   P+GK TGEA+V+FAS E A++A+ K K  IG RY+E+F S+  E
Subjt:  HGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNE

Query:  AR
         R
Subjt:  AR

Q5E9J1 Heterogeneous nuclear ribonucleoprotein F9.8e-2737.13Show/hide
Query:  VVRLRGLPFNCTDIDIFKFFAGLDIVDVL-----LVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY
        VV+LRGLP++C+  D+  F +   I D +     +  + GR  GEAFV       V+ AL++DR++MG RY+EVF+  R +               D   
Subjt:  VVRLRGLPFNCTDIDIFKFFAGLDIVDVL-----LVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY

Query:  HGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNE
          S P      ND         ++LRGLPF  TK  II+FF   ++  + I +   P+GK TGEA+V+FAS E A++A+ K K  IG RY+E+F S+  E
Subjt:  HGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNE

Query:  AR
         R
Subjt:  AR

Q60HC3 Heterogeneous nuclear ribonucleoprotein F1.3e-2636.63Show/hide
Query:  VVRLRGLPFNCTDIDIFKFFAGLDIVD-----VLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY
        VV+LRGLP++C+  D+  F +   I D       +  + GR  GEAFV       V+ AL++DR++MG RY+EVF+  R +               D   
Subjt:  VVRLRGLPFNCTDIDIFKFFAGLDIVD-----VLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY

Query:  HGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNE
          S P      ND         ++LRGLPF  TK  I++FF   ++  + I +   P+GK TGEA+V+FAS E A++A+ K K  IG RY+E+F S+  E
Subjt:  HGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNE

Query:  AR
         R
Subjt:  AR

Q794E4 Heterogeneous nuclear ribonucleoprotein F1.3e-2636.63Show/hide
Query:  VVRLRGLPFNCTDIDIFKFFAGLDIVDVL-----LVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY
        VV+LRGLP++C+  D+  F +   I D +     +  + GR  GEAFV       V+ AL++DR++MG RY+EVF+  R +               D   
Subjt:  VVRLRGLPFNCTDIDIFKFFAGLDIVDVL-----LVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY

Query:  HGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNE
          S P      ND         ++LRGLPF  TK  I++FF   ++  + I +   P+GK TGEA+V+FAS E A++A+ K K  IG RY+E+F S+  E
Subjt:  HGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNE

Query:  AR
         R
Subjt:  AR

Q9Z2X1 Heterogeneous nuclear ribonucleoprotein F1.3e-2636.63Show/hide
Query:  VVRLRGLPFNCTDIDIFKFFAGLDIVDVL-----LVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY
        VV+LRGLP++C+  D+  F +   I D +     +  + GR  GEAFV       V+ AL++DR++MG RY+EVF+  R +               D   
Subjt:  VVRLRGLPFNCTDIDIFKFFAGLDIVDVL-----LVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY

Query:  HGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNE
          S P      ND         ++LRGLPF  TK  I++FF   ++  + I +   P+GK TGEA+V+FAS E A++A+ K K  IG RY+E+F S+  E
Subjt:  HGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNE

Query:  AR
         R
Subjt:  AR

Arabidopsis top hitse value%identityAlignment
AT3G20890.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.9e-5845.28Show/hide
Query:  PTPYFAV-SSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVF
        P P++    SS   + PYG+ + PP P FP VRLRGLPF+C ++D+ +FF GLD+VDVL V++N +  GEAF V    +QV+FALQ++RQNMGRRYVEVF
Subjt:  PTPYFAV-SSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVF

Query:  RCKRQDYYNAVAAEVNYEGIY--------------------------DNDYHGSPPPR---QKRFND--KDQMEYTEILKLRGLPFSVTKSNIIEFFGEF
        R  +Q+YY A+A EV    ++                               GS P R   + R +D  K+ +E+T IL+LRGLPFS  K +I++FF +F
Subjt:  RCKRQDYYNAVAAEVNYEGIY--------------------------DNDYHGSPPPR---QKRFND--KDQMEYTEILKLRGLPFSVTKSNIIEFFGEF

Query:  DLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSR
        +L+ED +H+    +G+ TGEA+VEF +AE+++ AM KD+ T+GSRY+ELFPS+  E   A SR R
Subjt:  DLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSR

AT4G36960.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.0e-0729.06Show/hide
Query:  LKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQMTFYRCGYSSLQ
        L + G+P+ +    + ++  +F   ED I +  R  G++ G  YV FASAE+AK A+ K +  +G+R +E+  +TP E  R  ++     F         
Subjt:  LKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQMTFYRCGYSSLQ

Query:  SRLNESICGDESILHFE
        +R+  S+   +   HFE
Subjt:  SRLNESICGDESILHFE

AT4G36960.2 RNA-binding (RRM/RBD/RNP motifs) family protein3.0e-0729.06Show/hide
Query:  LKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQMTFYRCGYSSLQ
        L + G+P+ +    + ++  +F   ED I +  R  G++ G  YV FASAE+AK A+ K +  +G+R +E+  +TP E  R  ++     F         
Subjt:  LKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQMTFYRCGYSSLQ

Query:  SRLNESICGDESILHFE
        +R+  S+   +   HFE
Subjt:  SRLNESICGDESILHFE

AT5G66010.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.0e-8765.98Show/hide
Query:  MMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE
        MM+  PY AV +    F P+GY        FPVVRLRGLPFNC DIDIF+FFAGL+IVDVLLV+KNG+F GEAFVVFAG +QVE ALQRDR NMGRRYVE
Subjt:  MMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE

Query:  VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPP----RQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEF
        VFRC +QDYYNAVAAE   EG Y+ +   SPPP    R KRF++K+++EYTE+LK+RGLP+SV K  IIEFF  + + + R+ +  RPDGKATGEA+VEF
Subjt:  VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPP----RQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEF

Query:  ASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
         + EEA+RAM+KDKM+IGSRYVELFP+T  EARRAE+RSRQ
Subjt:  ASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

AT5G66010.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.8e-5565.84Show/hide
Query:  VQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPP----RQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTED
        +QVE ALQRDR NMGRRYVEVFRC +QDYYNAVAAE   EG Y+ +   SPPP    R KRF++K+++EYTE+LK+RGLP+SV K  IIEFF  + + + 
Subjt:  VQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPP----RQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTED

Query:  RIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        R+ +  RPDGKATGEA+VEF + EEA+RAM+KDKM+IGSRYVELFP+T  EARRAE+RSRQ
Subjt:  RIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAACCGACTCCCTACTTCGCAGTTAGCAGCAGCACTGCTGGATTTCAACCTTATGGCTACGGGAGTTTTCCACCTACTCCTGCCTTTCCTGTGGTTCGCCTCAG
AGGACTTCCCTTCAACTGCACCGACATTGACATTTTCAAGTTCTTTGCTGGACTGGACATTGTGGATGTGCTGCTCGTCAACAAGAATGGGCGGTTCATGGGAGAGGCCT
TTGTTGTCTTTGCTGGCTCCGTGCAGGTTGAGTTTGCATTGCAACGTGATCGACAGAATATGGGGCGTAGGTACGTAGAAGTCTTCAGGTGCAAAAGACAGGATTATTAT
AATGCCGTTGCCGCTGAAGTAAATTACGAGGGCATTTATGATAACGACTACCATGGAAGTCCTCCTCCTCGACAAAAGAGGTTCAACGACAAGGACCAGATGGAATACAC
TGAGATTCTGAAGCTGCGTGGTCTTCCCTTCTCTGTGACAAAATCCAACATCATTGAATTTTTCGGAGAGTTTGACCTCACAGAAGATAGGATACATATTGCAAGTCGTC
CAGATGGGAAGGCTACTGGTGAGGCTTATGTGGAGTTTGCTTCAGCAGAGGAGGCAAAGAGAGCAATGAGCAAGGACAAGATGACAATTGGATCGAGATATGTGGAGTTG
TTCCCTTCAACCCCAAATGAAGCTAGAAGAGCTGAGTCAAGGTCAAGACAGATGACATTTTATCGTTGTGGGTATAGTTCTCTGCAGTCTAGGCTGAATGAATCAATCTG
TGGAGATGAATCGATACTGCATTTTGAGCTTGAAATTAGTCCTATGAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGAACCGACTCCCTACTTCGCAGTTAGCAGCAGCACTGCTGGATTTCAACCTTATGGCTACGGGAGTTTTCCACCTACTCCTGCCTTTCCTGTGGTTCGCCTCAG
AGGACTTCCCTTCAACTGCACCGACATTGACATTTTCAAGTTCTTTGCTGGACTGGACATTGTGGATGTGCTGCTCGTCAACAAGAATGGGCGGTTCATGGGAGAGGCCT
TTGTTGTCTTTGCTGGCTCCGTGCAGGTTGAGTTTGCATTGCAACGTGATCGACAGAATATGGGGCGTAGGTACGTAGAAGTCTTCAGGTGCAAAAGACAGGATTATTAT
AATGCCGTTGCCGCTGAAGTAAATTACGAGGGCATTTATGATAACGACTACCATGGAAGTCCTCCTCCTCGACAAAAGAGGTTCAACGACAAGGACCAGATGGAATACAC
TGAGATTCTGAAGCTGCGTGGTCTTCCCTTCTCTGTGACAAAATCCAACATCATTGAATTTTTCGGAGAGTTTGACCTCACAGAAGATAGGATACATATTGCAAGTCGTC
CAGATGGGAAGGCTACTGGTGAGGCTTATGTGGAGTTTGCTTCAGCAGAGGAGGCAAAGAGAGCAATGAGCAAGGACAAGATGACAATTGGATCGAGATATGTGGAGTTG
TTCCCTTCAACCCCAAATGAAGCTAGAAGAGCTGAGTCAAGGTCAAGACAGATGACATTTTATCGTTGTGGGTATAGTTCTCTGCAGTCTAGGCTGAATGAATCAATCTG
TGGAGATGAATCGATACTGCATTTTGAGCTTGAAATTAGTCCTATGAGTTGA
Protein sequenceShow/hide protein sequence
MMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYY
NAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVEL
FPSTPNEARRAESRSRQMTFYRCGYSSLQSRLNESICGDESILHFELEISPMS