; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0013652 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0013652
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationchr1:51813074..51814453
RNA-Seq ExpressionLag0013652
SyntenyLag0013652
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEE69144.1 hypothetical protein OsJ_28268 [Oryza sativa Japonica Group]2.8e-3327.07Show/hide
Query:  MPSRGNEIPHLLKNDLRGRLVKDIIDEHGVWKGNCIRENFPDMEARIIVDTPLCKDFKQDEIIWNLEAKGVFSVKSAYHLACNLVSSQEASSSKASSFDP
        +P   +  P   K + R R V D+ID+ G W  + I  +F  M+A  I++  L    ++D I W+ +  G FSV+SAYHLA  L    + SSS  +    
Subjt:  MPSRGNEIPHLLKNDLRGRLVKDIIDEHGVWKGNCIRENFPDMEARIIVDTPLCKDFKQDEIIWNLEAKGVFSVKSAYHLACNLVSSQEASSSKASSFDP

Query:  IWRRFWKLQVVPKAKLCAWRIIKDSLPTLSNIVKKGIVTNSGCVLCRSHQESATHLFWNCKKTKKL------------ADNLDN---------------E
             WK     K K+ AWR I +SL TL N  K+ +  +  C +C    E   H  ++C   ++L              N+ N               E
Subjt:  IWRRFWKLQVVPKAKLCAWRIIKDSLPTLSNIVKKGIVTNSGCVLCRSHQESATHLFWNCKKTKKL------------ADNLDN---------------E

Query:  DLVKAITLLWSIWTHRNAVFREEATPYTNTIIRIIDSSSLAVSSLEDSYQSKQD-----------DQSSARLKSPPSHVDWIAPPKGCWKLNVDASRNDR
        D V  + +LW IW  RN +   +  P      R I+S  L+++ ++   Q+  +              S +    P+   W  P  G  KLNVD S  + 
Subjt:  DLVKAITLLWSIWTHRNAVFREEATPYTNTIIRIIDSSSLAVSSLEDSYQSKQD-----------DQSSARLKSPPSHVDWIAPPKGCWKLNVDASRNDR

Query:  QLSGGVGWILRDSLGSTICLGLQKVAKKWSVQMLEIKAIIESLRSIPSLKASCPNLAIPHILVESDAAGVVNLLNKEVEDLTESSFLAEEALQAAAMVGG
        +  GG+G +LR+  G  I      V    S   +E+ A  + L       A      +  I++E+D   +V+L        +E +FL  E          
Subjt:  QLSGGVGWILRDSLGSTICLGLQKVAKKWSVQMLEIKAIIESLRSIPSLKASCPNLAIPHILVESDAAGVVNLLNKEVEDLTESSFLAEEALQAAAMVGG

Query:  ISFGFCSRSRNEVAHRLA------RTAAFPPPN---FSSSLFCSSSN
        ISF  C RS+N ++H LA      +   F P N   F S   C  +N
Subjt:  ISFGFCSRSRNEVAHRLA------RTAAFPPPN---FSSSLFCSSSN

TXG50387.1 hypothetical protein EZV62_022911 [Acer yangbiense]1.3e-3326.14Show/hide
Query:  DLRGRLVKDIIDEHGVWKGNCIRENFPDMEARIIVDTPLCKDFKQDEIIWNLEAKGVFSVKSAYHLACNLVSSQEASSSKASSFDPIWRRFWKLQVVPKA
        DL+  +V ++    G W    IR +F   +A +I+  P     + D + W+ + +G ++V+S Y +A +L     +SS + S   P WR  WK  +  K 
Subjt:  DLRGRLVKDIIDEHGVWKGNCIRENFPDMEARIIVDTPLCKDFKQDEIIWNLEAKGVFSVKSAYHLACNLVSSQEASSSKASSFDPIWRRFWKLQVVPKA

Query:  KLCAWRIIKDSLPTLSNIVKKGIVTNSGCVLCRSHQESATHLFWNCKKTKKLADNLDNEDLVKAITL-------------------------LWSIWTHR
        K+  W+     LPT + + ++ +     C +C    ES TH+ W+C    ++   L  +D+++ I +                          W +WT+R
Subjt:  KLCAWRIIKDSLPTLSNIVKKGIVTNSGCVLCRSHQESATHLFWNCKKTKKLADNLDNEDLVKAITL-------------------------LWSIWTHR

Query:  NAVFREEATPYTNTIIRIIDSSSLAVSSLEDSYQSKQDDQSSARLKSPPSHVDWIAPPKGCWKLNVDASRNDRQLSGGVGWILRDSLGSTICLGLQKVAK
        N+V    A      ++  ID       +  + ++   +      L   PS   W  P +G +K+N DAS   R    GVG I+RD  GS I      V  
Subjt:  NAVFREEATPYTNTIIRIIDSSSLAVSSLEDSYQSKQDDQSSARLKSPPSHVDWIAPPKGCWKLNVDASRNDRQLSGGVGWILRDSLGSTICLGLQKVAK

Query:  KWSVQMLEIKAIIESLRSIPSLKASCPNLAIPHILVESDAAGVVNLLNKEVEDLTESSFLAEEALQAAAMVGGISFGFCSRSRNEVAHRLARTA
          SV+MLE +A +E +           ++ +  +++ESDAA V+ LL+ +    TE   +   +L   A V  +S+    R  N VAH +A+ A
Subjt:  KWSVQMLEIKAIIESLRSIPSLKASCPNLAIPHILVESDAAGVVNLLNKEVEDLTESSFLAEEALQAAAMVGGISFGFCSRSRNEVAHRLARTA

XP_023881891.1 uncharacterized protein LOC111994244 [Quercus suber]2.8e-3328.72Show/hide
Query:  VKDIID-EHGVWKGNCIRENFPDMEARIIVDTPLCKDFKQDEIIWNLEAKGVFSVKSAYHLACNLVSSQE-ASSSKASSFDPIWRRFWKLQVVPKAKLCA
        V  +ID E   WK + +R+ F   EAR I+  PL  +F +D+IIW    KG FSVKSAY++A  ++ + E   SS   S   +WR+ W L + PK ++ A
Subjt:  VKDIID-EHGVWKGNCIRENFPDMEARIIVDTPLCKDFKQDEIIWNLEAKGVFSVKSAYHLACNLVSSQE-ASSSKASSFDPIWRRFWKLQVVPKAKLCA

Query:  WRIIKDSLPTLSNIVKKGIVTNSGCVLCRSHQESATHLFWNCKKTKKL--------AD----NLDNEDLVKAI-------------TLLWSIWTHRNAVF
        W++  ++LPT  N+++KG+     C  C    ES  H+F  C+  K++        AD    N+D  D+   I              + W+IW +RN + 
Subjt:  WRIIKDSLPTLSNIVKKGIVTNSGCVLCRSHQESATHLFWNCKKTKKL--------AD----NLDNEDLVKAI-------------TLLWSIWTHRNAVF

Query:  REEATPYTNTIIRIIDSSSLAVSSLEDSYQSKQDDQSSARLKSPPSHVDWIAPPKGCWKLNVDASRNDRQLSGGVGWILRDSLGSTICLGLQKVAKKWSV
         E  +     I        L   +   +Y              P S   W+APP G +K+NVD + ++   +  VG I+RD+ G         +  ++SV
Subjt:  REEATPYTNTIIRIIDSSSLAVSSLEDSYQSKQDDQSSARLKSPPSHVDWIAPPKGCWKLNVDASRNDRQLSGGVGWILRDSLGSTICLGLQKVAKKWSV

Query:  QMLEIKAIIESLRSIPSLKASCPNLAIPHILVESDAAGVVNLLNKEVEDLTESSFLAEEALQAAAMVGGISFGFCSRSRNEVAHRLARTA
        + +E  A+   L      K       +P I++ESDA  VV+ +N   E       + +  L   +  G        R  N+ AH LA+ A
Subjt:  QMLEIKAIIESLRSIPSLKASCPNLAIPHILVESDAAGVVNLLNKEVEDLTESSFLAEEALQAAAMVGGISFGFCSRSRNEVAHRLARTA

XP_030958760.1 uncharacterized protein LOC115980671 [Quercus lobata]5.6e-3426.62Show/hide
Query:  WKGNCIRENFPDMEARIIVDTPLCKDFKQDEIIWNLEAKGVFSVKSAYHLACNLVS-SQEASSSKASSFDPIWRRFWKLQVVPKAKLCAWRIIKDSLPTL
        W+ + ++  F   EA  I++ P+  +  +D +IW    KGVFSVKSAY++A NL+  S E  SS     + +W++ W L +  K K+ AWR   D+LPT+
Subjt:  WKGNCIRENFPDMEARIIVDTPLCKDFKQDEIIWNLEAKGVFSVKSAYHLACNLVS-SQEASSSKASSFDPIWRRFWKLQVVPKAKLCAWRIIKDSLPTL

Query:  SNIVKKGIVTNSGCVLCRSHQESATHLFWNCKKTKK-------------------------LADNLDNEDLVKAITLLWSIWTHRNAVFREEATPYTNTI
         N+ K+GI  N  C  C S  E+ +H    C+  K+                         + D     DL    T+ WSIW +RN V  E      + I
Subjt:  SNIVKKGIVTNSGCVLCRSHQESATHLFWNCKKTKK-------------------------LADNLDNEDLVKAITLLWSIWTHRNAVFREEATPYTNTI

Query:  IRIIDSSSLAVSSLEDSYQSKQDDQSSARLKSPPSHVDWIAPPKGCWKLNVDASRNDRQLSGGVGWILRDSLGSTICLGLQKVAKKWSVQMLEIKAIIES
         R   +      +   +   +Q  ++            W  PP G +K+NVD + +    +   G ++RDS G+ I    +     +SV   E  A+   
Subjt:  IRIIDSSSLAVSSLEDSYQSKQDDQSSARLKSPPSHVDWIAPPKGCWKLNVDASRNDRQLSGGVGWILRDSLGSTICLGLQKVAKKWSVQMLEIKAIIES

Query:  LRSIPSLKASCPNLAIPHILVESDAAGVVNLLNKEVEDLTESSFLAEEALQAAAMVGGISFGFCSRSRNEVAHRLARTAAFPPPNFSSSLFCSSSNSEEE
        +     +K       IP +++ESDAA +V+ +N +V D      L +      +           R  N VAH LA  A                   E 
Subjt:  LRSIPSLKASCPNLAIPHILVESDAAGVVNLLNKEVEDLTESSFLAEEALQAAAMVGGISFGFCSRSRNEVAHRLARTAAFPPPNFSSSLFCSSSNSEEE

Query:  GGFWVGPPPLWVVGLLK
           WVG PP  +V +++
Subjt:  GGFWVGPPPLWVVGLLK

XP_030970961.1 uncharacterized protein LOC115991405 [Quercus lobata]5.6e-3426.62Show/hide
Query:  WKGNCIRENFPDMEARIIVDTPLCKDFKQDEIIWNLEAKGVFSVKSAYHLACNLVS-SQEASSSKASSFDPIWRRFWKLQVVPKAKLCAWRIIKDSLPTL
        W+ + ++  F   EA  I++ P+  +  +D +IW    KGVFSVKSAY++A NL+  S E  SS     + +W++ W L +  K K+ AWR   D+LPT+
Subjt:  WKGNCIRENFPDMEARIIVDTPLCKDFKQDEIIWNLEAKGVFSVKSAYHLACNLVS-SQEASSSKASSFDPIWRRFWKLQVVPKAKLCAWRIIKDSLPTL

Query:  SNIVKKGIVTNSGCVLCRSHQESATHLFWNCKKTKK-------------------------LADNLDNEDLVKAITLLWSIWTHRNAVFREEATPYTNTI
         N+ K+GI  N  C  C S  E+ +H    C+  K+                         + D     DL    T+ WSIW +RN V  E      + I
Subjt:  SNIVKKGIVTNSGCVLCRSHQESATHLFWNCKKTKK-------------------------LADNLDNEDLVKAITLLWSIWTHRNAVFREEATPYTNTI

Query:  IRIIDSSSLAVSSLEDSYQSKQDDQSSARLKSPPSHVDWIAPPKGCWKLNVDASRNDRQLSGGVGWILRDSLGSTICLGLQKVAKKWSVQMLEIKAIIES
         R   +      +   +   +Q  ++            W  PP G +K+NVD + +    +   G ++RDS G+ I    +     +SV   E  A+   
Subjt:  IRIIDSSSLAVSSLEDSYQSKQDDQSSARLKSPPSHVDWIAPPKGCWKLNVDASRNDRQLSGGVGWILRDSLGSTICLGLQKVAKKWSVQMLEIKAIIES

Query:  LRSIPSLKASCPNLAIPHILVESDAAGVVNLLNKEVEDLTESSFLAEEALQAAAMVGGISFGFCSRSRNEVAHRLARTAAFPPPNFSSSLFCSSSNSEEE
        +     +K       IP +++ESDAA +V+ +N +V D      L +      +           R  N VAH LA  A                   E 
Subjt:  LRSIPSLKASCPNLAIPHILVESDAAGVVNLLNKEVEDLTESSFLAEEALQAAAMVGGISFGFCSRSRNEVAHRLARTAAFPPPNFSSSLFCSSSNSEEE

Query:  GGFWVGPPPLWVVGLLK
           WVG PP  +V +++
Subjt:  GGFWVGPPPLWVVGLLK

TrEMBL top hitse value%identityAlignment
A0A5C7H0P0 Uncharacterized protein6.1e-3426.14Show/hide
Query:  DLRGRLVKDIIDEHGVWKGNCIRENFPDMEARIIVDTPLCKDFKQDEIIWNLEAKGVFSVKSAYHLACNLVSSQEASSSKASSFDPIWRRFWKLQVVPKA
        DL+  +V ++    G W    IR +F   +A +I+  P     + D + W+ + +G ++V+S Y +A +L     +SS + S   P WR  WK  +  K 
Subjt:  DLRGRLVKDIIDEHGVWKGNCIRENFPDMEARIIVDTPLCKDFKQDEIIWNLEAKGVFSVKSAYHLACNLVSSQEASSSKASSFDPIWRRFWKLQVVPKA

Query:  KLCAWRIIKDSLPTLSNIVKKGIVTNSGCVLCRSHQESATHLFWNCKKTKKLADNLDNEDLVKAITL-------------------------LWSIWTHR
        K+  W+     LPT + + ++ +     C +C    ES TH+ W+C    ++   L  +D+++ I +                          W +WT+R
Subjt:  KLCAWRIIKDSLPTLSNIVKKGIVTNSGCVLCRSHQESATHLFWNCKKTKKLADNLDNEDLVKAITL-------------------------LWSIWTHR

Query:  NAVFREEATPYTNTIIRIIDSSSLAVSSLEDSYQSKQDDQSSARLKSPPSHVDWIAPPKGCWKLNVDASRNDRQLSGGVGWILRDSLGSTICLGLQKVAK
        N+V    A      ++  ID       +  + ++   +      L   PS   W  P +G +K+N DAS   R    GVG I+RD  GS I      V  
Subjt:  NAVFREEATPYTNTIIRIIDSSSLAVSSLEDSYQSKQDDQSSARLKSPPSHVDWIAPPKGCWKLNVDASRNDRQLSGGVGWILRDSLGSTICLGLQKVAK

Query:  KWSVQMLEIKAIIESLRSIPSLKASCPNLAIPHILVESDAAGVVNLLNKEVEDLTESSFLAEEALQAAAMVGGISFGFCSRSRNEVAHRLARTA
          SV+MLE +A +E +           ++ +  +++ESDAA V+ LL+ +    TE   +   +L   A V  +S+    R  N VAH +A+ A
Subjt:  KWSVQMLEIKAIIESLRSIPSLKASCPNLAIPHILVESDAAGVVNLLNKEVEDLTESSFLAEEALQAAAMVGGISFGFCSRSRNEVAHRLARTA

A0A7C9A7V4 Uncharacterized protein1.8e-3329.37Show/hide
Query:  VKDIID-EHGVWKGNCIRENFPDMEARIIVDTPLCKDFKQDEIIWNLEAKGVFSVKSAYHLACNLVSSQEASSSKASS--FDPIWRRFWKLQVVPKAKLC
        V ++ID +   W    IR+ F  ++A  I++ PL +D  +D +IW+    GVF+V+SA  LA  +   Q+ ++  + S  FD  W R W     P+AK  
Subjt:  VKDIID-EHGVWKGNCIRENFPDMEARIIVDTPLCKDFKQDEIIWNLEAKGVFSVKSAYHLACNLVSSQEASSSKASS--FDPIWRRFWKLQVVPKAKLC

Query:  AWRIIKDSLPTLSNIVKKGIVTNSGCVLCRSHQESATHLF---------WN-------------------CKKTKKLADNLDNEDLVKAITLLWSIWTHR
         WR  +D+LPT  N+ K+G+  +  C +C +  E+ TH+F         W                    C  T KL   LD        TLLW +W  R
Subjt:  AWRIIKDSLPTLSNIVKKGIVTNSGCVLCRSHQESATHLF---------WN-------------------CKKTKKLADNLDNEDLVKAITLLWSIWTHR

Query:  NA-VFREEATPYTNTIIRIIDSSSLAVSSLEDSYQSKQDDQSSARLKSPPSHVDWIAPPKGCWKLNVDASRNDRQLSGGVGWILRDSLGSTICLGLQKVA
        N  VF  +      T++R +DS +  V  L+ + +     Q           + W  P +G  K+NVDAS   R    GVG ++RD  G    +  +   
Subjt:  NA-VFREEATPYTNTIIRIIDSSSLAVSSLEDSYQSKQDDQSSARLKSPPSHVDWIAPPKGCWKLNVDASRNDRQLSGGVGWILRDSLGSTICLGLQKVA

Query:  KKWSVQMLEIKAIIESLRSIPSLKASCPNLAIPHILVESDAAGVVNLLNKEVEDLTESSFLAEEALQAAAMVGGISFGFCSRSRNEVAHRLARTA
          W V+ +E  A++  L+        C       + +E+D+  V + LN + + L  +S    +AL     +  ISF F SR  N VAH LAR A
Subjt:  KKWSVQMLEIKAIIESLRSIPSLKASCPNLAIPHILVESDAAGVVNLLNKEVEDLTESSFLAEEALQAAAMVGGISFGFCSRSRNEVAHRLARTA

A0A7N2L6Z9 Reverse transcriptase domain-containing protein1.5e-3229.33Show/hide
Query:  LVKDIID-EHGVWKGNCIRENFPDMEARIIVDTPLCKDFKQDEIIWNLEAKGVFSVKSAYHLACNLVSSQE-ASSSKASSFDPIWRRFWKLQVVPKAKLC
        +V  +ID +   WK + IR  F  ++A  I+  PL  +   D IIW    KG FSVKSAY +A NL+ S E    S    F P+W+  WKL +  K K+ 
Subjt:  LVKDIID-EHGVWKGNCIRENFPDMEARIIVDTPLCKDFKQDEIIWNLEAKGVFSVKSAYHLACNLVSSQE-ASSSKASSFDPIWRRFWKLQVVPKAKLC

Query:  AWRIIKDSLPTLSNIVKKGIVTNSGCVLCRSHQESATHLFWNC---------------------KKTKKLA----DNLDNEDLVKAITLLWSIWTHRNAV
        AWR   + LPT++N+  +G+  N  C +C    E   H    C                     +  K LA     N     L+    + W+IW +RN  
Subjt:  AWRIIKDSLPTLSNIVKKGIVTNSGCVLCRSHQESATHLFWNC---------------------KKTKKLA----DNLDNEDLVKAITLLWSIWTHRNAV

Query:  FREEATPYTNTIIRIIDSSSLAVSSLEDSYQSKQDDQSSA-RLKSPPSHV---DWIAPPKGCWKLNVD-ASRNDRQLSGGVGWILRDSLGSTICLGLQKV
                    +R+ D   L+     +  Q   DD   A +L  PP       W APP G +K+NVD A   D   S GVG ++RD  G  I    + +
Subjt:  FREEATPYTNTIIRIIDSSSLAVSSLEDSYQSKQDDQSSA-RLKSPPSHV---DWIAPPKGCWKLNVD-ASRNDRQLSGGVGWILRDSLGSTICLGLQKV

Query:  AKKWSVQMLEIKAIIESLRSIPSLKASCPNLAIPHILVESDAAGVVNLLNKEVEDLTESSFLAEEALQAAAMVGGISFGFCSRSRNEVAHRLARTAAFPP
           +  +  E+ AI + L            + +P I++ESDA   +  +N    +  E+  L E  LQ+ A+    SF +  R  N VAH+LA+      
Subjt:  AKKWSVQMLEIKAIIESLRSIPSLKASCPNLAIPHILVESDAAGVVNLLNKEVEDLTESSFLAEEALQAAAMVGGISFGFCSRSRNEVAHRLARTAAFPP

Query:  PNFSSSLFCSSSNSEEEGGFWVGPPPLWVVGLL
          F+ S  CS          W G  P +V  L+
Subjt:  PNFSSSLFCSSSNSEEEGGFWVGPPPLWVVGLL

A0A803QH07 Uncharacterized protein3.3e-3228.21Show/hide
Query:  VKDIIDEHGVWKGNCIRENFPDMEARIIVDTPLCKDFKQDEIIWNLEAKGVFSVKSAYHLACNLVSSQEASSSKASSFDPIWRRFWKLQVVPKAKLCAWR
        V  +I+++  W    + + F  ++   I+  PL     QD +IW+    G ++VKS +HLA +L    ++SSS A+     W+ FW L + PK ++ AW+
Subjt:  VKDIIDEHGVWKGNCIRENFPDMEARIIVDTPLCKDFKQDEIIWNLEAKGVFSVKSAYHLACNLVSSQEASSSKASSFDPIWRRFWKLQVVPKAKLCAWR

Query:  IIKDSLPTLSNIVKKGIVTNSGCVLCRSHQESATHLFWNCKKTKKL------------ADNLDN-------------EDLVKAITLLWSIWTHRNAVFRE
        +I+  LP  + + K+ ++ ++ C LC S  ES  H  + C   K +            A ++ N             ED    I LLW IWT RN VF  
Subjt:  IIKDSLPTLSNIVKKGIVTNSGCVLCRSHQESATHLFWNCKKTKKL------------ADNLDN-------------EDLVKAITLLWSIWTHRNAVFRE

Query:  EATPYTNTIIRIIDSSSLAVSSLEDSYQSKQDDQSSARLKSP---------PSHVDWIAPPKGCWKLNVDASRNDRQLSGGVGWILRDSLGSTICLGLQK
             +++II          S     + S Q   ++A L S            H  W  P    +KLNVDA+ N  Q   G+G I+R   G  +    + 
Subjt:  EATPYTNTIIRIIDSSSLAVSSLEDSYQSKQDDQSSARLKSP---------PSHVDWIAPPKGCWKLNVDASRNDRQLSGGVGWILRDSLGSTICLGLQK

Query:  VAKKWSVQMLEIKAIIESLRSIPSLKASCPNLAIPHILVESDAAGVVNLLNKEVEDLTESSFLAEEALQAAAMVGGISFGFCSRSRNEVAHRLARTA
        V   +    +E KA+  +L  +     S   L+I HI  E+DA  V   LN    DL+  S L  +     +    +      RS N+ AH LAR A
Subjt:  VAKKWSVQMLEIKAIIESLRSIPSLKASCPNLAIPHILVESDAAGVVNLLNKEVEDLTESSFLAEEALQAAAMVGGISFGFCSRSRNEVAHRLARTA

B9FYJ3 Uncharacterized protein1.4e-3327.07Show/hide
Query:  MPSRGNEIPHLLKNDLRGRLVKDIIDEHGVWKGNCIRENFPDMEARIIVDTPLCKDFKQDEIIWNLEAKGVFSVKSAYHLACNLVSSQEASSSKASSFDP
        +P   +  P   K + R R V D+ID+ G W  + I  +F  M+A  I++  L    ++D I W+ +  G FSV+SAYHLA  L    + SSS  +    
Subjt:  MPSRGNEIPHLLKNDLRGRLVKDIIDEHGVWKGNCIRENFPDMEARIIVDTPLCKDFKQDEIIWNLEAKGVFSVKSAYHLACNLVSSQEASSSKASSFDP

Query:  IWRRFWKLQVVPKAKLCAWRIIKDSLPTLSNIVKKGIVTNSGCVLCRSHQESATHLFWNCKKTKKL------------ADNLDN---------------E
             WK     K K+ AWR I +SL TL N  K+ +  +  C +C    E   H  ++C   ++L              N+ N               E
Subjt:  IWRRFWKLQVVPKAKLCAWRIIKDSLPTLSNIVKKGIVTNSGCVLCRSHQESATHLFWNCKKTKKL------------ADNLDN---------------E

Query:  DLVKAITLLWSIWTHRNAVFREEATPYTNTIIRIIDSSSLAVSSLEDSYQSKQD-----------DQSSARLKSPPSHVDWIAPPKGCWKLNVDASRNDR
        D V  + +LW IW  RN +   +  P      R I+S  L+++ ++   Q+  +              S +    P+   W  P  G  KLNVD S  + 
Subjt:  DLVKAITLLWSIWTHRNAVFREEATPYTNTIIRIIDSSSLAVSSLEDSYQSKQD-----------DQSSARLKSPPSHVDWIAPPKGCWKLNVDASRNDR

Query:  QLSGGVGWILRDSLGSTICLGLQKVAKKWSVQMLEIKAIIESLRSIPSLKASCPNLAIPHILVESDAAGVVNLLNKEVEDLTESSFLAEEALQAAAMVGG
        +  GG+G +LR+  G  I      V    S   +E+ A  + L       A      +  I++E+D   +V+L        +E +FL  E          
Subjt:  QLSGGVGWILRDSLGSTICLGLQKVAKKWSVQMLEIKAIIESLRSIPSLKASCPNLAIPHILVESDAAGVVNLLNKEVEDLTESSFLAEEALQAAAMVGG

Query:  ISFGFCSRSRNEVAHRLA------RTAAFPPPN---FSSSLFCSSSN
        ISF  C RS+N ++H LA      +   F P N   F S   C  +N
Subjt:  ISFGFCSRSRNEVAHRLA------RTAAFPPPN---FSSSLFCSSSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43730.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein7.7e-0528.57Show/hide
Query:  FSVKSAYHLACNLVSSQEASSS--KASSFDPIWRRFWKLQVVPKAKLCAWRIIKDSLPTLSNIVKKGIVTNSGCVLCRSHQESATHLFWNC
        F  K+  H   N+ S+ + S +    +   P ++  W    VPK     W +  + L T   +   G+   + C+LC SH ES  HLF+ C
Subjt:  FSVKSAYHLACNLVSSQEASSS--KASSFDPIWRRFWKLQVVPKAKLCAWRIIKDSLPTLSNIVKKGIVTNSGCVLCRSHQESATHLFWNC

AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.5e-0826.73Show/hide
Query:  LLWSIWTHRN-AVFREEATPYTNTIIRIIDSSSLAVSSLEDSYQSKQDDQSSARLKSPPSHVDWIAPPKGCWKLNVDASRNDRQLSGGVGWILRDSLGST
        LLW +W  RN  +F+ +       + R ++         E S + + + ++S         V W APP    K N DA+        G+GWILR+  G  
Subjt:  LLWSIWTHRN-AVFREEATPYTNTIIRIIDSSSLAVSSLEDSYQSKQDDQSSARLKSPPSHVDWIAPPKGCWKLNVDASRNDRQLSGGVGWILRDSLGST

Query:  ICLGLQKVAKKWSVQMLEIKAIIESLRSIPSLKASCPNLAIPHILVESDAAGVVNLLNKEVEDLTESSFLAEEALQAAAMVGGISFGFCSRSRNEVAHRL
        + +G + + +  +V   E++A+  ++ ++              I+ ESDA  +VNLLN +    T    L E+  Q       + F F  R  N+VA R+
Subjt:  ICLGLQKVAKKWSVQMLEIKAIIESLRSIPSLKASCPNLAIPHILVESDAAGVVNLLNKEVEDLTESSFLAEEALQAAAMVGGISFGFCSRSRNEVAHRL

Query:  AR
        AR
Subjt:  AR

AT3G09510.1 Ribonuclease H-like superfamily protein1.2e-2124.3Show/hide
Query:  LCKDFKQDEIIWNLEAKGVFSVKSAYHLACNLVSSQEASSSKASSFDPIWRRFWKLQVVPKAKLCAWRIIKDSLPTLSNIVKKGIVTNSGCVLCRSHQES
        L K  K D+IIWN    G ++V+S Y L  +  S+   + +       +  R W L ++PK K   WR +  +L T   +  +G+  +  C  C    ES
Subjt:  LCKDFKQDEIIWNLEAKGVFSVKSAYHLACNLVSSQEASSSKASSFDPIWRRFWKLQVVPKAKLCAWRIIKDSLPTLSNIVKKGIVTNSGCVLCRSHQES

Query:  ATH---------LFWNCKKTKKLADNLDNEDLVKAIT---------------------LLWSIWTHR-NAVFREEATPYTNTIIRIIDSSSLAVSSLEDS
          H         + W    +  + + L + D  + I+                     L+W IW  R N VF +     + T++    S+        ++
Subjt:  ATH---------LFWNCKKTKKLADNLDNEDLVKAIT---------------------LLWSIWTHR-NAVFREEATPYTNTIIRIIDSSSLAVSSLEDS

Query:  YQSKQDDQSSARLKSPPSHVDWIAPPKGCWKLNVDASRNDRQLSGGVGWILRDSLGSTICLGLQKVAKKWSVQMLEIKAIIESLRSIPSLKASCPNLAIP
         QS +   S  R +   + ++W  PP    K N DA  + ++L    GWI+R+  G+ I  G  K+A   +    E KA++ +L+               
Subjt:  YQSKQDDQSSARLKSPPSHVDWIAPPKGCWKLNVDASRNDRQLSGGVGWILRDSLGSTICLGLQKVAKKWSVQMLEIKAIIESLRSIPSLKASCPNLAIP

Query:  HILVESDAAGVVNLLNKEVEDLTESSFLA---EEALQAAAMVGGISFGFCSRSRNEVAHRLARTAAFPPPNFSSS---------LFCSSSN
         + +E D   ++NL+N     ++  S LA   E+    A     I FGF  R  N++AH LA+        +S S          FC+ SN
Subjt:  HILVESDAAGVVNLLNKEVEDLTESSFLA---EEALQAAAMVGGISFGFCSRSRNEVAHRLARTAAFPPPNFSSS---------LFCSSSN

AT4G29090.1 Ribonuclease H-like superfamily protein4.3e-2424.24Show/hide
Query:  VKDIIDEHG-VWKGNCIRENFPDMEARIIVDTPLCKDFKQDEIIWNLEAKGVFSVKSAYHLACNLVSSQEASSSKAS-SFDPIWRRFWKLQVVPKAKLCA
        V D+IDE G  W+ + I   FP++E ++I +         D   W+  + G ++VKS Y +   +++ + +    +  S +PI+++ WK Q  PK +   
Subjt:  VKDIIDEHG-VWKGNCIRENFPDMEARIIVDTPLCKDFKQDEIIWNLEAKGVFSVKSAYHLACNLVSSQEASSSKAS-SFDPIWRRFWKLQVVPKAKLCA

Query:  WRIIKDSLPTLSNIVKKGIVTNSGCVLCRSHQESATHLFWNCKKTK--------------KLADNL------------DNEDLVKAIT----LLWSIWTH
        W+ + +SLP    +  + +   S C+ C S +E+  HL + C   +              + AD++             N    KA      LLW +W +
Subjt:  WRIIKDSLPTLSNIVKKGIVTNSGCVLCRSHQESATHLFWNCKKTK--------------KLADNL------------DNEDLVKAIT----LLWSIWTH

Query:  RN-AVFREEATPYTNTIIRIIDS-SSLAVSSLEDSYQSK-QDDQSSARLKSPPSHVDWIAPPKGCWKLNVDASRNDRQLSGGVGWILRDSLGSTICLGLQ
        RN  VFR         + R  D      + +  +S  +K Q ++SS     PP H  W+       K N DA+ N      G+GW+LR+  G    +G +
Subjt:  RN-AVFREEATPYTNTIIRIIDS-SSLAVSSLEDSYQSK-QDDQSSARLKSPPSHVDWIAPPKGCWKLNVDASRNDRQLSGGVGWILRDSLGSTICLGLQ

Query:  KVAKKWSVQMLEIKAIIESLRSIPSLKASCPNLAIPHILVESDAAGVVNLLNKEVEDLTESSFLAEEALQAAAMVGGISFGFCSRSRNEVAHRLAR
         + K  SV   E++A+  ++ S+   + +       +++ ESD+  ++ +LN + E         ++  +  +    + F F  R  N +A R+AR
Subjt:  KVAKKWSVQMLEIKAIIESLRSIPSLKASCPNLAIPHILVESDAAGVVNLLNKEVEDLTESSFLAEEALQAAAMVGGISFGFCSRSRNEVAHRLAR

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.0e-0824.39Show/hide
Query:  LLWSIWTHRN-AVFREEATPYTNTIIRIIDSSSLAVSSLEDSYQSKQDDQSSARLKSPPSHVDWIAPPKGCWKLNVDASRNDRQLSGGVGWILRDSLGST
        L+W IW   N  VF    T +  T+   ++ +      L+++  ++Q  Q+  R   P  +  W  P +   K N DAS ++R    G+GWILR+S G+ 
Subjt:  LLWSIWTHRN-AVFREEATPYTNTIIRIIDSSSLAVSSLEDSYQSKQDDQSSARLKSPPSHVDWIAPPKGCWKLNVDASRNDRQLSGGVGWILRDSLGST

Query:  ICLGLQKVAKKWSVQMLEIKAIIESLRSIPSLKASCPNLAIPHILVESDAAGVVNLLNKEVEDLTESSFLAEEALQA-AAMVGGISFGFCSRSRNEVAHR
        I  G+ K   + + +  E   +I +++       +        ++ E D   +  ++N +  +     FL  + +Q+       I F F  R +N  A  
Subjt:  ICLGLQKVAKKWSVQMLEIKAIIESLRSIPSLKASCPNLAIPHILVESDAAGVVNLLNKEVEDLTESSFLAEEALQA-AAMVGGISFGFCSRSRNEVAHR

Query:  LARTA
        LA+ A
Subjt:  LARTA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTCTCGCGGAAATGAGATTCCCCATCTCCTCAAGAATGACCTTAGAGGTCGACTGGTTAAAGACATTATTGATGAGCACGGAGTTTGGAAAGGAAATTGTATCAG
AGAAAATTTCCCAGACATGGAAGCTAGAATCATTGTGGATACGCCTCTTTGTAAAGATTTTAAGCAGGACGAGATAATCTGGAATCTCGAAGCGAAAGGGGTGTTTTCGG
TCAAAAGTGCCTATCACCTAGCTTGCAACCTTGTTTCATCTCAAGAAGCGTCTTCCTCGAAAGCCTCTAGTTTTGACCCTATTTGGCGTAGATTTTGGAAGCTTCAGGTT
GTGCCTAAAGCTAAATTATGTGCTTGGAGGATTATCAAAGATTCCCTACCAACACTCTCTAACATTGTTAAAAAAGGAATAGTGACTAATTCGGGTTGTGTTTTGTGCAG
ATCTCATCAAGAATCGGCCACTCACCTATTCTGGAATTGCAAGAAGACTAAAAAGCTGGCGGATAATTTGGACAACGAGGACCTTGTCAAAGCAATAACTCTTTTATGGA
GTATATGGACACACAGGAATGCTGTTTTTAGAGAAGAAGCTACCCCATATACCAACACTATTATCAGAATTATCGACAGCAGCAGTTTGGCAGTCAGTAGTTTGGAAGAT
TCTTACCAGTCTAAGCAGGACGATCAATCTTCTGCTAGATTGAAGAGTCCGCCGAGTCATGTTGATTGGATCGCTCCTCCGAAAGGATGTTGGAAGCTCAATGTCGACGC
GTCCCGTAACGATCGGCAGCTCAGTGGAGGTGTAGGATGGATCCTTCGTGACTCGTTGGGGTCTACGATCTGCTTGGGTCTTCAGAAGGTTGCTAAAAAATGGTCTGTGC
AGATGCTTGAAATCAAAGCAATCATAGAAAGTCTTCGTTCAATTCCTTCTCTGAAAGCTTCATGTCCGAATTTGGCCATCCCGCACATTTTGGTCGAATCGGATGCAGCC
GGCGTTGTTAATCTCCTCAACAAAGAAGTGGAGGACCTCACAGAATCTTCATTTCTGGCAGAGGAAGCGCTCCAGGCGGCTGCTATGGTGGGAGGTATCTCCTTTGGTTT
TTGCTCAAGATCGAGGAATGAAGTCGCACATCGTCTGGCGCGAACCGCTGCTTTCCCTCCCCCAAATTTTAGTTCTTCGTTGTTTTGTTCTTCTTCTAATTCAGAAGAGG
AAGGAGGTTTTTGGGTCGGGCCCCCTCCGTTGTGGGTGGTTGGGCTCCTTAAAGATGTATTGAATTCTAATTTCTTCCAGTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTCTCGCGGAAATGAGATTCCCCATCTCCTCAAGAATGACCTTAGAGGTCGACTGGTTAAAGACATTATTGATGAGCACGGAGTTTGGAAAGGAAATTGTATCAG
AGAAAATTTCCCAGACATGGAAGCTAGAATCATTGTGGATACGCCTCTTTGTAAAGATTTTAAGCAGGACGAGATAATCTGGAATCTCGAAGCGAAAGGGGTGTTTTCGG
TCAAAAGTGCCTATCACCTAGCTTGCAACCTTGTTTCATCTCAAGAAGCGTCTTCCTCGAAAGCCTCTAGTTTTGACCCTATTTGGCGTAGATTTTGGAAGCTTCAGGTT
GTGCCTAAAGCTAAATTATGTGCTTGGAGGATTATCAAAGATTCCCTACCAACACTCTCTAACATTGTTAAAAAAGGAATAGTGACTAATTCGGGTTGTGTTTTGTGCAG
ATCTCATCAAGAATCGGCCACTCACCTATTCTGGAATTGCAAGAAGACTAAAAAGCTGGCGGATAATTTGGACAACGAGGACCTTGTCAAAGCAATAACTCTTTTATGGA
GTATATGGACACACAGGAATGCTGTTTTTAGAGAAGAAGCTACCCCATATACCAACACTATTATCAGAATTATCGACAGCAGCAGTTTGGCAGTCAGTAGTTTGGAAGAT
TCTTACCAGTCTAAGCAGGACGATCAATCTTCTGCTAGATTGAAGAGTCCGCCGAGTCATGTTGATTGGATCGCTCCTCCGAAAGGATGTTGGAAGCTCAATGTCGACGC
GTCCCGTAACGATCGGCAGCTCAGTGGAGGTGTAGGATGGATCCTTCGTGACTCGTTGGGGTCTACGATCTGCTTGGGTCTTCAGAAGGTTGCTAAAAAATGGTCTGTGC
AGATGCTTGAAATCAAAGCAATCATAGAAAGTCTTCGTTCAATTCCTTCTCTGAAAGCTTCATGTCCGAATTTGGCCATCCCGCACATTTTGGTCGAATCGGATGCAGCC
GGCGTTGTTAATCTCCTCAACAAAGAAGTGGAGGACCTCACAGAATCTTCATTTCTGGCAGAGGAAGCGCTCCAGGCGGCTGCTATGGTGGGAGGTATCTCCTTTGGTTT
TTGCTCAAGATCGAGGAATGAAGTCGCACATCGTCTGGCGCGAACCGCTGCTTTCCCTCCCCCAAATTTTAGTTCTTCGTTGTTTTGTTCTTCTTCTAATTCAGAAGAGG
AAGGAGGTTTTTGGGTCGGGCCCCCTCCGTTGTGGGTGGTTGGGCTCCTTAAAGATGTATTGAATTCTAATTTCTTCCAGTTTTAA
Protein sequenceShow/hide protein sequence
MPSRGNEIPHLLKNDLRGRLVKDIIDEHGVWKGNCIRENFPDMEARIIVDTPLCKDFKQDEIIWNLEAKGVFSVKSAYHLACNLVSSQEASSSKASSFDPIWRRFWKLQV
VPKAKLCAWRIIKDSLPTLSNIVKKGIVTNSGCVLCRSHQESATHLFWNCKKTKKLADNLDNEDLVKAITLLWSIWTHRNAVFREEATPYTNTIIRIIDSSSLAVSSLED
SYQSKQDDQSSARLKSPPSHVDWIAPPKGCWKLNVDASRNDRQLSGGVGWILRDSLGSTICLGLQKVAKKWSVQMLEIKAIIESLRSIPSLKASCPNLAIPHILVESDAA
GVVNLLNKEVEDLTESSFLAEEALQAAAMVGGISFGFCSRSRNEVAHRLARTAAFPPPNFSSSLFCSSSNSEEEGGFWVGPPPLWVVGLLKDVLNSNFFQF