CuGenDBv2

Gene ID	Lag0013773
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Ribonuclease H-like superfamily protein
Genome location	chr1:52627558..52629252
RNA-Seq Expression	Lag0013773
Synteny	Lag0013773
Gene Ontology terms	GO:0003676 - nucleic acid binding (molecular function) GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domains	IPR002156 - Ribonuclease H domain IPR012337 - Ribonuclease H-like superfamily IPR026960 - Reverse transcriptase zinc-binding domain IPR036397 - Ribonuclease H superfamily IPR044730 - Ribonuclease H-like domain, plant type

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

ONI01138.1 hypothetical protein PRUPE_6G123900 [Prunus persica]

1.8e-93

35.8

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Query:  MSVFQFPKKLCEDITRNFSRFWWGSNDDKKKLHWCSWDKLCLPKSLGGLNFRDLEGFNKALVAKQVWRLMAYPNSLVSRFMKSLYFKNSGILDADIGKNP
        MS F+ PK LC+++    +RFWW    DK+ +HW  W+ LC  K  GGL FRDLE FN+AL+AKQ WR++  P SLV+R  ++ Y  +   L+A++G NP
Subjt:  MSVFQFPKKLCEDITRNFSRFWWGSNDDKKKLHWCSWDKLCLPKSLGGLNFRDLEGFNKALVAKQVWRLMAYPNSLVSRFMKSLYFKNSGILDADIGKNP

Query:  SYIWKSFLWGRDLLIKGLRFRLGNGEKIFMFEDPWILKEINFKLVCIDRNFLNMRVVDFITPSGDWDISKLDQAVLSSDVEVIRKIPISN-HSEDKLVWH
        S+IW+S  WG++LL KGLR+R+G+G  I ++ D W+     FK++   +  L+ RV D  T SG W++  L       +V+ I +IP+++    D L+WH
Subjt:  SYIWKSFLWGRDLLIKGLRFRLGNGEKIFMFEDPWILKEINFKLVCIDRNFLNMRVVDFITPSGDWDISKLDQAVLSSDVEVIRKIPISN-HSEDKLVWH

Query:  YDKLGRYTVKSGYKL--FMKAKIDGISSSSNSM-SHIWKSIWNLKIPSKIRHFCWKALNNTLPTKFNLKNRGVDNDMFCPICSNHVETTDHILFTCKRAK
        Y++ G Y+VKSGY+L    K K+ G  S+   + S  WK IW LKIP+KI+ F W+   + LP    L NR +     CP C    E+  H ++ C+ AK
Subjt:  YDKLGRYTVKSGYKL--FMKAKIDGISSSSNSM-SHIWKSIWNLKIPSKIRHFCWKALNNTLPTKFNLKNRGVDNDMFCPICSNHVETTDHILFTCKRAK

Query:  DIW-NLTFKNVSLNVVFNESFADRWFDISSKVSKEDLGLVAVTCWAIWMDRNKFVHEDPIPPANIRSQWILEYLRSFVEANSKAGIMHQSLANHSSPSLS
        ++W N  + NV   V    SF + W  +    S E+ GL A  CW +W  RN F+ E     A      + +  + F +AN+   I+H      SSP   
Subjt:  DIW-NLTFKNVSLNVVFNESFADRWFDISSKVSKEDLGLVAVTCWAIWMDRNKFVHEDPIPPANIRSQWILEYLRSFVEANSKAGIMHQSLANHSSPSLS

Query:  -EIWSPPPTDFWKINSDAAWKDHPPEMGIGLVCRNSEGAIIEASSSFSPSVPEAPCAELKAILMGIRRAQALGCNKIIIESDCQIAINFLTKSSEVWSIA
         + W PPP          A K      G+G+V RN+ G  + A      +   A   EL A + G+R A  +G    I+E D Q  +N +  + E   I 
Subjt:  -EIWSPPPTDFWKINSDAAWKDHPPEMGIGLVCRNSEGAIIEASSSFSPSVPEAPCAELKAILMGIRRAQALGCNKIIIESDCQIAINFLTKSSEVWSIA

Query:  EGLVEEIWAMADGLKEVKFQFVPRKGNRVADYLAKRAKLSKCSDF--WDNNFPDWLSLLVENDRSSL
          L+EE+  + +  + V   + PR GN+VA  LA+ A    C++F  W    P WL  ++E D  SL
Subjt:  EGLVEEIWAMADGLKEVKFQFVPRKGNRVADYLAKRAKLSKCSDF--WDNNFPDWLSLLVENDRSSL

VVA32947.1 PREDICTED: retrotransposon [Prunus dulcis]

9.5e-98

36.04

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Query:  MSVFQFPKKLCEDITRNFSRFWWGSNDDKKKLHWCSWDKLCLPKSLGGLNFRDLEGFNKALVAKQVWRLMAYPNSLVSRFMKSLYFKNSGILDADIGKNP
        MS F+ PK LC+++    +RFWW    DK+ +HW  W+ LC  K  GGL FRDLE FN+AL+AKQ WR++  P SLV+R  ++ Y  +   L+A++G NP
Subjt:  MSVFQFPKKLCEDITRNFSRFWWGSNDDKKKLHWCSWDKLCLPKSLGGLNFRDLEGFNKALVAKQVWRLMAYPNSLVSRFMKSLYFKNSGILDADIGKNP

Query:  SYIWKSFLWGRDLLIKGLRFRLGNGEKIFMFEDPWILKEINFKLVCIDRNFLNMRVVDFITPSGDWDISKLDQAVLSSDVEVIRKIPISN-HSEDKLVWH
        S+IW+S  WG++LL KGLR+R+GNG  I ++ D W+     FK++   +  L+  V D  T SG W++  L       +V+   +IP+++    D L+WH
Subjt:  SYIWKSFLWGRDLLIKGLRFRLGNGEKIFMFEDPWILKEINFKLVCIDRNFLNMRVVDFITPSGDWDISKLDQAVLSSDVEVIRKIPISN-HSEDKLVWH

Query:  YDKLGRYTVKSGYKL--FMKAKIDGISSSSNSM-SHIWKSIWNLKIPSKIRHFCWKALNNTLPTKFNLKNRGVDNDMFCPICSNHVETTDHILFTCKRAK
        Y++ G Y+VKSGY+L    K K+ G  S    + S  WK IW LKIP+KI+ F W+   + LP    L NR +     CP C    E+  H ++ C+ AK
Subjt:  YDKLGRYTVKSGYKL--FMKAKIDGISSSSNSM-SHIWKSIWNLKIPSKIRHFCWKALNNTLPTKFNLKNRGVDNDMFCPICSNHVETTDHILFTCKRAK

Query:  DIW-NLTFKNVSLNVVFNESFADRWFDISSKVSKEDLGLVAVTCWAIWMDRNKFVHEDPIPPANIRSQWILEYLRSFVEANSKAGIMHQSLANHSSPSLS
        ++W N  + NV      N SF + W  +    S E+ GL A  CW +W  RN F+ E     A      + +  + F  AN+ +  +H   ++  +P   
Subjt:  DIW-NLTFKNVSLNVVFNESFADRWFDISSKVSKEDLGLVAVTCWAIWMDRNKFVHEDPIPPANIRSQWILEYLRSFVEANSKAGIMHQSLANHSSPSLS

Query:  EIWSPPPTDFWKINSDAAWKDHPPEMGIGLVCRNSEGAIIEASSSFSPSVPEAPCAELKAILMGIRRAQALGCNKIIIESDCQIAINFLTKSSEVWSIAE
          W PPP   +KIN D A K      G+G+V RN+ G  + A      +   A   EL A + G+R A  +G    ++E D Q  IN +  + E   I  
Subjt:  EIWSPPPTDFWKINSDAAWKDHPPEMGIGLVCRNSEGAIIEASSSFSPSVPEAPCAELKAILMGIRRAQALGCNKIIIESDCQIAINFLTKSSEVWSIAE

Query:  GLVEEIWAMADGLKEVKFQFVPRKGNRVADYLAKRAKLSKCSDF--WDNNFPDWLSLLVENDRSSL
         L+EE+  +    + V  Q+ PR GN+VA  LA+ A    C++F  W    P WL  ++E D  SL
Subjt:  GLVEEIWAMADGLKEVKFQFVPRKGNRVADYLAKRAKLSKCSDF--WDNNFPDWLSLLVENDRSSL

XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]

7.2e-106

36.45

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Query:  MSVFQFPKKLCEDITRNFSRFWWGSNDDKKKLHWCSWDKLCLPKSLGGLNFRDLEGFNKALVAKQVWRLMAYPNSLVSRFMKSLYFKNSGILDADIGKNP
        MSVF+ PK LCEDI +  +RFWWG+  DK  +HW  WD +   K  GGL FRDL  FN+ALVAKQ WRL+ YPNSL++R MK+ Y+KNS   +A +G NP
Subjt:  MSVFQFPKKLCEDITRNFSRFWWGSNDDKKKLHWCSWDKLCLPKSLGGLNFRDLEGFNKALVAKQVWRLMAYPNSLVSRFMKSLYFKNSGILDADIGKNP

Query:  SYIWKSFLWGRDLLIKGLRFRLGNGEKIFMFEDPWILKEINFKLVCIDRNFLNMRVVDFITPSGDWDISKLDQAVLSSDVEVIRKIPI-SNHSEDKLVWH
        S+IW+S LWG  ++ KG+R+R+G+G+K+ +++D WI +   F+ +          V D I     W + +L+Q  +  D+E I KI + S   ED+++WH
Subjt:  SYIWKSFLWGRDLLIKGLRFRLGNGEKIFMFEDPWILKEINFKLVCIDRNFLNMRVVDFITPSGDWDISKLDQAVLSSDVEVIRKIPI-SNHSEDKLVWH

Query:  YDKLGRYTVKSGYKLFMKAKIDGISSSSNSMSHIWKSIWNLKIPSKIRHFCWKALNNTLPTKFNLKNRGVDNDMFCPICSNHVETTDHILFTCKRAKDIW
        +DK G Y+VKSGY+L +         SSNS S +WK  W L +P K++ F W+AL N LPT  NL  R    +  C  C   VET  H+L  CK A+ IW
Subjt:  YDKLGRYTVKSGYKLFMKAKIDGISSSSNSMSHIWKSIWNLKIPSKIRHFCWKALNNTLPTKFNLKNRGVDNDMFCPICSNHVETTDHILFTCKRAKDIW

Query:  NLTFKNVSLNVVFNESFADRWFDISSKVSKEDLGLVAVTCWAIWMDRNKFVHEDPIPPANIRSQWILEYLRSFVEANSKAGIMHQSLANHSSPSLSEIWS
        +L    V  +   N+ F     ++ S+ S  +  L+ V CW IW  RNKF+ E     +   +      L+++ +  SK G +H +          + W 
Subjt:  NLTFKNVSLNVVFNESFADRWFDISSKVSKEDLGLVAVTCWAIWMDRNKFVHEDPIPPANIRSQWILEYLRSFVEANSKAGIMHQSLANHSSPSLSEIWS

Query:  PPPTDFWKINSDAAWKDHPPEMGIGLVCRNSEGAIIEASSSFSPSVPEAPCAELKAILMGIRRAQALGCNKIIIESDCQIAINFLTKSSEVWSIAEGLVE
        PP  +  K+N DAA      ++G+G + R++EG I+      +        AE +AI  G++ A  +  + +I+ESDC+  +  L  +    +    ++ 
Subjt:  PPPTDFWKINSDAAWKDHPPEMGIGLVCRNSEGAIIEASSSFSPSVPEAPCAELKAILMGIRRAQALGCNKIIIESDCQIAINFLTKSSEVWSIAEGLVE

Query:  EIWAMADGLKEVKFQFVPRKGNRVADYLAKRAKLSKCSDFWDNNFP
        ++   +   K+V+F F+PR  N  A  LAK A  +  +D W   FP
Subjt:  EIWAMADGLKEVKFQFVPRKGNRVADYLAKRAKLSKCSDFWDNNFP

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]

1.4e-104

37.29

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Query:  DKKKLHWCSWDKLCLPKSLGGLNFRDLEGFNKALVAKQVWRLMAYPNSLVSRFMKSLYFKNSGILDADIGKNPSYIWKSFLWGRDLLIKGLRFRLGNGEK
        + +KLHW  W ++C PK  GGLNFRDLEGFN+ALVAK VWR + +PN LVS+ +K  YFK++ +L A      SY WK FLWGRDLL+KGLR R+GNG  
Subjt:  DKKKLHWCSWDKLCLPKSLGGLNFRDLEGFNKALVAKQVWRLMAYPNSLVSRFMKSLYFKNSGILDADIGKNPSYIWKSFLWGRDLLIKGLRFRLGNGEK

Query:  IFMFEDPWILKEINFKLVCIDRNFLNMRVVDFITPSGDWDISKLDQAVLSSDVEVIRKIPISNHS-EDKLVWHYDKLGRYTVKSGYKLFMKAKIDGISSS
        I  F DPW+ +   FK +  +   L+  V  FIT  G+WD++ +  +  + D ++I  +PIS+++ +D  +WHYDK G Y+V+SGYKL+M  K +  S+S
Subjt:  IFMFEDPWILKEINFKLVCIDRNFLNMRVVDFITPSGDWDISKLDQAVLSSDVEVIRKIPISNHS-EDKLVWHYDKLGRYTVKSGYKLFMKAKIDGISSS

Query:  SNSMSHIWKSIWNLKIPSKIRHFCWKALNNTLPTKFNLKNRGVDNDMFCPICSNHVETTDHILFTCKRAKDIWNLTFKNVS-LNVVFNESFADRWFDISS
        +N     W SIW L +P+KI+ F W++ +  +PT  NL  RG+     C IC +  E+  H  F CKRA+ IW   F  ++ L+   N SF + W  ++ 
Subjt:  SNSMSHIWKSIWNLKIPSKIRHFCWKALNNTLPTKFNLKNRGVDNDMFCPICSNHVETTDHILFTCKRAKDIWNLTFKNVS-LNVVFNESFADRWFDISS

Query:  KVSKEDLGLVAVTCWAIWMDRNKFVHEDPIPPANIRSQWILEYLRSFVEANSKAGIMHQSLANHSSPSLSEIWSPPPTDFWKINSDAAWKDHPPEMGIGL
        ++  +DL L A+T W IW DRN  +H   + P   + +W+  +L S  +A   +    ++ +NH    + + W P  +   K+N+DAA +        G 
Subjt:  KVSKEDLGLVAVTCWAIWMDRNKFVHEDPIPPANIRSQWILEYLRSFVEANSKAGIMHQSLANHSSPSLSEIWSPPPTDFWKINSDAAWKDHPPEMGIGL

Query:  VCRNSEGAIIEASSSFSPSVPEAPCAELKAILMGIRRAQALGCNKIIIESDCQIAINFLTKSSEVWSIAEGLVEEIWAMADGLKEVKFQFVPRKGNRVAD
        + R+S  +++ A+S   P       AE++ IL G++ A A     + +ESD  +AI  +          +  V EI A+      + F    R+ NR A 
Subjt:  VCRNSEGAIIEASSSFSPSVPEAPCAELKAILMGIRRAQALGCNKIIIESDCQIAINFLTKSSEVWSIAEGLVEEIWAMADGLKEVKFQFVPRKGNRVAD

Query:  YLAKRAKLSKCSDF-WDNNFPDWLSLLVEND
         LAK    S  + + W  NFP WL  LV+ D
Subjt:  YLAKRAKLSKCSDF-WDNNFPDWLSLLVEND

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]

1.9e-98

36.71

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Query:  MSVFQFPKKLCEDITRNFSRFWWGSNDDKKKLHWCSWDKLCLPKSLGGLNFRDLEGFNKALVAKQVWRLMAYPNSLVSRFMKSLYFKNSGILDADIGKNP
        MSVF+ P+  C+DI R  ++FWWGS  DK+ +HW  W+KL   K  GGL FR+   FN+ALVAKQ WRL+ YPNSLVSR +++ YF+NS  L A  G N 
Subjt:  MSVFQFPKKLCEDITRNFSRFWWGSNDDKKKLHWCSWDKLCLPKSLGGLNFRDLEGFNKALVAKQVWRLMAYPNSLVSRFMKSLYFKNSGILDADIGKNP

Query:  SYIWKSFLWGRDLLIKGLRFRLGNGEKIFMFEDPWILKEINFKLVCIDRNFLNMRVVDFITPSGDWDISKLDQAVLSSDVEVIRKIPI-SNHSEDKLVWH
        SYIW+S +WGR ++ KG+R+R+GNG+KI +F D W+ +   F+ +      ++  V D I     WD  KL Q  L  D   I KIP+ +  +ED+++WH
Subjt:  SYIWKSFLWGRDLLIKGLRFRLGNGEKIFMFEDPWILKEINFKLVCIDRNFLNMRVVDFITPSGDWDISKLDQAVLSSDVEVIRKIPI-SNHSEDKLVWH

Query:  YDKLGRYTVKSGYKLFMKAKIDGISSSSNSMSHIWKSIWNLKIPSKIRHFCWKALNNTLPTKFNLKNRGVDNDMFCPICSNHVETTDHILFTCKRAKDIW
        YDK G Y+VKSGY+L +++K    +S + +    W ++W L++P K++ F W+A NN LP+  NL  R V  +  C  C   VET  H L  CK A+ IW
Subjt:  YDKLGRYTVKSGYKLFMKAKIDGISSSSNSMSHIWKSIWNLKIPSKIRHFCWKALNNTLPTKFNLKNRGVDNDMFCPICSNHVETTDHILFTCKRAKDIW

Query:  -NLTFKNVSLNVVFNESFADRWFDISSKVSKEDLGLVAVTCWAIWMDRNKFVHE----DPIPPANIRSQWILEYLRSFVEANSKAGIMHQSLANHSSPSL
            F    L     + F+    +++ ++ K DL L+   CW+ W  RNK + +    +PI  A            S + A  +     QS  + S    
Subjt:  -NLTFKNVSLNVVFNESFADRWFDISSKVSKEDLGLVAVTCWAIWMDRNKFVHE----DPIPPANIRSQWILEYLRSFVEANSKAGIMHQSLANHSSPSL

Query:  SEIWSPPPTDFWKINSDAAWKDHPPEMGIGLVCRNSEGAIIEASSSFSPSVPEAPCAELKAILMGIRRAQALGCNKIIIESDCQIAINFLTKSSEVWSIA
         + W PPP + +K+N DAA+       G+G V R+S G I+ A  + +     A  AE +A+L G++ A+    + +IIESDC   +  +  +    S  
Subjt:  SEIWSPPPTDFWKINSDAAWKDHPPEMGIGLVCRNSEGAIIEASSSFSPSVPEAPCAELKAILMGIRRAQALGCNKIIIESDCQIAINFLTKSSEVWSIA

Query:  EGLVEEIWAMADGLKEVKFQFVPRKGNRVADYLAKRA--KLSKCSDFWDNNFP
           +  I       ++V    +PR  N  A YLAK A  K+S C   W  N P
Subjt:  EGLVEEIWAMADGLKEVKFQFVPRKGNRVADYLAKRA--KLSKCSDFWDNNFP

TrEMBL top hits

e value

%identity

Alignment

A0A1S8ACU2 Ribonuclease H-like superfamily protein

2.1e-98

34.78

Show/hide

Query:  MSVFQFPKKLCEDITRNFSRFWWGSNDDKKKLHWCSWDKLCLPKSLGGLNFRDLEGFNKALVAKQVWRLMAYPNSLVSRFMKSLYFKNSGILDADIGKNP
        MSVF+ P  LCEDI R  + FWWG+  D+K  HW SW+KLC  K  GGL FRD+  FN+ALVAKQ WR++ YP SL+++ +++ YFK +  L A +G  P
Subjt:  MSVFQFPKKLCEDITRNFSRFWWGSNDDKKKLHWCSWDKLCLPKSLGGLNFRDLEGFNKALVAKQVWRLMAYPNSLVSRFMKSLYFKNSGILDADIGKNP

Query:  SYIWKSFLWGRDLLIKGLRFRLGNGEKIFMFEDPWILKEINFKLVCIDRNFLNMRVVDFITPSGDWDISKLDQAVLSSDVEVIRKI--PISNHSEDKLVW
        S++W+S +WGR +++ G+R+R+G G+++ +++  WI +   FK +      ++  V + I  +  W  S + Q     D E+I +I  PIS    D+++W
Subjt:  SYIWKSFLWGRDLLIKGLRFRLGNGEKIFMFEDPWILKEINFKLVCIDRNFLNMRVVDFITPSGDWDISKLDQAVLSSDVEVIRKI--PISNHSEDKLVW

Query:  HYDKLGRYTVKSGYKLFMKAKIDGISSSSNSMSHIWKSIWNLKIPSKIRHFCWKALNNTLPTKFNLKNRGVDNDMFCPICSNHVETTDHILFTCKRAKDI
        HYDK G Y+VKSGY++ M+ K     SSS+S    W  IW+L++P KI+ F WKA  N LPT  NL  R +  +  CP C    E  +H +  CK AK +
Subjt:  HYDKLGRYTVKSGYKLFMKAKIDGISSSSNSMSHIWKSIWNLKIPSKIRHFCWKALNNTLPTKFNLKNRGVDNDMFCPICSNHVETTDHILFTCKRAKDI

Query:  WNLTFKNVSLNVVFNESFADRWFDISSKVSKEDLGLVAVTCWAIWMDRNKFVHEDPIPPANIRSQWILEYLRSFVEANSKAGIMHQSLANHSSPSLSEIW
        W LT     + ++ N+       ++ ++ SK++L L+   CW  W  RN FV E+      I     +    + VE+ ++  +     A  + P+    W
Subjt:  WNLTFKNVSLNVVFNESFADRWFDISSKVSKEDLGLVAVTCWAIWMDRNKFVHEDPIPPANIRSQWILEYLRSFVEANSKAGIMHQSLANHSSPSLSEIW

Query:  SPPPTDFWKINSDAAWKDHPPEMGIGLVCRNSEGAIIEASSSFSPSVPEAPCAELKAILMGIRRAQALGCNKIIIESDCQIAINFL--TKSSEV---WSI
         PPP   +K N DAA      ++G+G+V R+  GAII A+ + +    +   AE  A+  G++       + +I+E+DCQ  ++F+   KSS     W+I
Subjt:  SPPPTDFWKINSDAAWKDHPPEMGIGLVCRNSEGAIIEASSSFSPSVPEAPCAELKAILMGIRRAQALGCNKIIIESDCQIAINFL--TKSSEV---WSI

Query:  AEGLVEEIWAMADGLKEVKFQFVPRKGNRVADYLAKRAKLSKCSDFWDNNFP
        +E  +++     + +  V+ Q + R  N +A  LAK A +++ S  W    P
Subjt:  AEGLVEEIWAMADGLKEVKFQFVPRKGNRVADYLAKRAKLSKCSDFWDNNFP

A0A5E4FZN9 PREDICTED: retrotransposon

4.6e-98

36.04

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Query:  MSVFQFPKKLCEDITRNFSRFWWGSNDDKKKLHWCSWDKLCLPKSLGGLNFRDLEGFNKALVAKQVWRLMAYPNSLVSRFMKSLYFKNSGILDADIGKNP
        MS F+ PK LC+++    +RFWW    DK+ +HW  W+ LC  K  GGL FRDLE FN+AL+AKQ WR++  P SLV+R  ++ Y  +   L+A++G NP
Subjt:  MSVFQFPKKLCEDITRNFSRFWWGSNDDKKKLHWCSWDKLCLPKSLGGLNFRDLEGFNKALVAKQVWRLMAYPNSLVSRFMKSLYFKNSGILDADIGKNP

Query:  SYIWKSFLWGRDLLIKGLRFRLGNGEKIFMFEDPWILKEINFKLVCIDRNFLNMRVVDFITPSGDWDISKLDQAVLSSDVEVIRKIPISN-HSEDKLVWH
        S+IW+S  WG++LL KGLR+R+GNG  I ++ D W+     FK++   +  L+  V D  T SG W++  L       +V+   +IP+++    D L+WH
Subjt:  SYIWKSFLWGRDLLIKGLRFRLGNGEKIFMFEDPWILKEINFKLVCIDRNFLNMRVVDFITPSGDWDISKLDQAVLSSDVEVIRKIPISN-HSEDKLVWH

Query:  YDKLGRYTVKSGYKL--FMKAKIDGISSSSNSM-SHIWKSIWNLKIPSKIRHFCWKALNNTLPTKFNLKNRGVDNDMFCPICSNHVETTDHILFTCKRAK
        Y++ G Y+VKSGY+L    K K+ G  S    + S  WK IW LKIP+KI+ F W+   + LP    L NR +     CP C    E+  H ++ C+ AK
Subjt:  YDKLGRYTVKSGYKL--FMKAKIDGISSSSNSM-SHIWKSIWNLKIPSKIRHFCWKALNNTLPTKFNLKNRGVDNDMFCPICSNHVETTDHILFTCKRAK

Query:  DIW-NLTFKNVSLNVVFNESFADRWFDISSKVSKEDLGLVAVTCWAIWMDRNKFVHEDPIPPANIRSQWILEYLRSFVEANSKAGIMHQSLANHSSPSLS
        ++W N  + NV      N SF + W  +    S E+ GL A  CW +W  RN F+ E     A      + +  + F  AN+ +  +H   ++  +P   
Subjt:  DIW-NLTFKNVSLNVVFNESFADRWFDISSKVSKEDLGLVAVTCWAIWMDRNKFVHEDPIPPANIRSQWILEYLRSFVEANSKAGIMHQSLANHSSPSLS

Query:  EIWSPPPTDFWKINSDAAWKDHPPEMGIGLVCRNSEGAIIEASSSFSPSVPEAPCAELKAILMGIRRAQALGCNKIIIESDCQIAINFLTKSSEVWSIAE
          W PPP   +KIN D A K      G+G+V RN+ G  + A      +   A   EL A + G+R A  +G    ++E D Q  IN +  + E   I  
Subjt:  EIWSPPPTDFWKINSDAAWKDHPPEMGIGLVCRNSEGAIIEASSSFSPSVPEAPCAELKAILMGIRRAQALGCNKIIIESDCQIAINFLTKSSEVWSIAE

Query:  GLVEEIWAMADGLKEVKFQFVPRKGNRVADYLAKRAKLSKCSDF--WDNNFPDWLSLLVENDRSSL
         L+EE+  +    + V  Q+ PR GN+VA  LA+ A    C++F  W    P WL  ++E D  SL
Subjt:  GLVEEIWAMADGLKEVKFQFVPRKGNRVADYLAKRAKLSKCSDF--WDNNFPDWLSLLVENDRSSL

A0A6J1DX30 uncharacterized protein LOC111024874

6.6e-105

37.29

Show/hide

Query:  DKKKLHWCSWDKLCLPKSLGGLNFRDLEGFNKALVAKQVWRLMAYPNSLVSRFMKSLYFKNSGILDADIGKNPSYIWKSFLWGRDLLIKGLRFRLGNGEK
        + +KLHW  W ++C PK  GGLNFRDLEGFN+ALVAK VWR + +PN LVS+ +K  YFK++ +L A      SY WK FLWGRDLL+KGLR R+GNG  
Subjt:  DKKKLHWCSWDKLCLPKSLGGLNFRDLEGFNKALVAKQVWRLMAYPNSLVSRFMKSLYFKNSGILDADIGKNPSYIWKSFLWGRDLLIKGLRFRLGNGEK

Query:  IFMFEDPWILKEINFKLVCIDRNFLNMRVVDFITPSGDWDISKLDQAVLSSDVEVIRKIPISNHS-EDKLVWHYDKLGRYTVKSGYKLFMKAKIDGISSS
        I  F DPW+ +   FK +  +   L+  V  FIT  G+WD++ +  +  + D ++I  +PIS+++ +D  +WHYDK G Y+V+SGYKL+M  K +  S+S
Subjt:  IFMFEDPWILKEINFKLVCIDRNFLNMRVVDFITPSGDWDISKLDQAVLSSDVEVIRKIPISNHS-EDKLVWHYDKLGRYTVKSGYKLFMKAKIDGISSS

Query:  SNSMSHIWKSIWNLKIPSKIRHFCWKALNNTLPTKFNLKNRGVDNDMFCPICSNHVETTDHILFTCKRAKDIWNLTFKNVS-LNVVFNESFADRWFDISS
        +N     W SIW L +P+KI+ F W++ +  +PT  NL  RG+     C IC +  E+  H  F CKRA+ IW   F  ++ L+   N SF + W  ++ 
Subjt:  SNSMSHIWKSIWNLKIPSKIRHFCWKALNNTLPTKFNLKNRGVDNDMFCPICSNHVETTDHILFTCKRAKDIWNLTFKNVS-LNVVFNESFADRWFDISS

Query:  KVSKEDLGLVAVTCWAIWMDRNKFVHEDPIPPANIRSQWILEYLRSFVEANSKAGIMHQSLANHSSPSLSEIWSPPPTDFWKINSDAAWKDHPPEMGIGL
        ++  +DL L A+T W IW DRN  +H   + P   + +W+  +L S  +A   +    ++ +NH    + + W P  +   K+N+DAA +        G 
Subjt:  KVSKEDLGLVAVTCWAIWMDRNKFVHEDPIPPANIRSQWILEYLRSFVEANSKAGIMHQSLANHSSPSLSEIWSPPPTDFWKINSDAAWKDHPPEMGIGL

Query:  VCRNSEGAIIEASSSFSPSVPEAPCAELKAILMGIRRAQALGCNKIIIESDCQIAINFLTKSSEVWSIAEGLVEEIWAMADGLKEVKFQFVPRKGNRVAD
        + R+S  +++ A+S   P       AE++ IL G++ A A     + +ESD  +AI  +          +  V EI A+      + F    R+ NR A 
Subjt:  VCRNSEGAIIEASSSFSPSVPEAPCAELKAILMGIRRAQALGCNKIIIESDCQIAINFLTKSSEVWSIAEGLVEEIWAMADGLKEVKFQFVPRKGNRVAD

Query:  YLAKRAKLSKCSDF-WDNNFPDWLSLLVEND
         LAK    S  + + W  NFP WL  LV+ D
Subjt:  YLAKRAKLSKCSDF-WDNNFPDWLSLLVEND

A0A803QQT2 Uncharacterized protein

1.0e-97

35.83

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Query:  MSVFQFPKKLCEDITRNFSRFWWGSNDDKKKLHWCSWDKLCLPKSLGGLNFRDLEGFNKALVAKQVWRLMAYPNSLVSRFMKSLYFKNSGILDADIGKNP
        MS F+ PKK    + R  SRFWWGS D +KK+HWC W  LC PK  GGL FRDL  FN+AL+AKQ+WR + +P  L SR +K+ YF   G+L+A  G N 
Subjt:  MSVFQFPKKLCEDITRNFSRFWWGSNDDKKKLHWCSWDKLCLPKSLGGLNFRDLEGFNKALVAKQVWRLMAYPNSLVSRFMKSLYFKNSGILDADIGKNP

Query:  SYIWKSFLWGRDLLIKGLRFRLGNGEKIFMFEDPWILKEINFKLVCIDRNFLNMRVVDFITPSGDWDISKLDQAVLSSDVEVIRKIPISNHS-EDKLVWH
        S++W+S +WG+ L++KG R+R+GNGE + + EDPW+ + + FK+        N+ V D     G WD   +      +DV++I  IP S+   EDK++WH
Subjt:  SYIWKSFLWGRDLLIKGLRFRLGNGEKIFMFEDPWILKEINFKLVCIDRNFLNMRVVDFITPSGDWDISKLDQAVLSSDVEVIRKIPISNHS-EDKLVWH

Query:  YDKLGRYTVKSGYKLFMKAKIDGISSSSNSMSHIWKSIWNLKIPSKIRHFCWKALNNTLPTKFNLKNRGVDNDMFCPICSNHV-ETTDHILFTCKRAKDI
        Y K G Y+VKSGY++      +   S+ +S+   WK +W LKIP K++HF WK  +N LP   NL  RG+ + + C  CS+HV E+  H L+ CK +K  
Subjt:  YDKLGRYTVKSGYKLFMKAKIDGISSSSNSMSHIWKSIWNLKIPSKIRHFCWKALNNTLPTKFNLKNRGVDNDMFCPICSNHV-ETTDHILFTCKRAKDI

Query:  WNLTFKNVSLNVVFNESFADRWFDISSKVSKEDLGLVAVTCWAIWMDRNKFVHEDPIPPANIRSQWILEYLRSFVEANSKAGIMHQSLANHSSPSLSEIW
        W ++     L  +  E        I+++  KE L    +  W IW  RN  VH    P      +W   +L  F       G   +  +  SS      W
Subjt:  WNLTFKNVSLNVVFNESFADRWFDISSKVSKEDLGLVAVTCWAIWMDRNKFVHEDPIPPANIRSQWILEYLRSFVEANSKAGIMHQSLANHSSPSLSEIW

Query:  SPPPTDFWKINSDAAWKDHPPEMGIGLVCRNSEGAIIEASSSFSPSVPEAPCAELKAILMGIRRAQALGCNKIIIESDCQIAINFLTKSSEVWSIAEGLV
         PP  D   IN DA  K      G+G V R++ G ++ A+++           EL AI  GI+        +  +E+DC  A++ +          +GL+
Subjt:  SPPPTDFWKINSDAAWKDHPPEMGIGLVCRNSEGAIIEASSSFSPSVPEAPCAELKAILMGIRRAQALGCNKIIIESDCQIAINFLTKSSEVWSIAEGLV

Query:  EEIWAMADGLKEVKFQFVPRKGNRVADYLAKRAKLSKCSDFWDNNFP
          I A+      V   FV R+ NRVA  LA  A + K S  W    P
Subjt:  EEIWAMADGLKEVKFQFVPRKGNRVADYLAKRAKLSKCSDFWDNNFP

M5W5F3 Reverse transcriptase domain-containing protein (Fragment)

9.0e-94

35.8

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Query:  MSVFQFPKKLCEDITRNFSRFWWGSNDDKKKLHWCSWDKLCLPKSLGGLNFRDLEGFNKALVAKQVWRLMAYPNSLVSRFMKSLYFKNSGILDADIGKNP
        MS F+ PK LC+++    +RFWW    DK+ +HW  W+ LC  K  GGL FRDLE FN+AL+AKQ WR++  P SLV+R  ++ Y  +   L+A++G NP
Subjt:  MSVFQFPKKLCEDITRNFSRFWWGSNDDKKKLHWCSWDKLCLPKSLGGLNFRDLEGFNKALVAKQVWRLMAYPNSLVSRFMKSLYFKNSGILDADIGKNP

Query:  SYIWKSFLWGRDLLIKGLRFRLGNGEKIFMFEDPWILKEINFKLVCIDRNFLNMRVVDFITPSGDWDISKLDQAVLSSDVEVIRKIPISN-HSEDKLVWH
        S+IW+S  WG++LL KGLR+R+G+G  I ++ D W+     FK++   +  L+ RV D  T SG W++  L       +V+ I +IP+++    D L+WH
Subjt:  SYIWKSFLWGRDLLIKGLRFRLGNGEKIFMFEDPWILKEINFKLVCIDRNFLNMRVVDFITPSGDWDISKLDQAVLSSDVEVIRKIPISN-HSEDKLVWH

Query:  YDKLGRYTVKSGYKL--FMKAKIDGISSSSNSM-SHIWKSIWNLKIPSKIRHFCWKALNNTLPTKFNLKNRGVDNDMFCPICSNHVETTDHILFTCKRAK
        Y++ G Y+VKSGY+L    K K+ G  S+   + S  WK IW LKIP+KI+ F W+   + LP    L NR +     CP C    E+  H ++ C+ AK
Subjt:  YDKLGRYTVKSGYKL--FMKAKIDGISSSSNSM-SHIWKSIWNLKIPSKIRHFCWKALNNTLPTKFNLKNRGVDNDMFCPICSNHVETTDHILFTCKRAK

Query:  DIW-NLTFKNVSLNVVFNESFADRWFDISSKVSKEDLGLVAVTCWAIWMDRNKFVHEDPIPPANIRSQWILEYLRSFVEANSKAGIMHQSLANHSSPSLS
        ++W N  + NV   V    SF + W  +    S E+ GL A  CW +W  RN F+ E     A      + +  + F +AN+   I+H      SSP   
Subjt:  DIW-NLTFKNVSLNVVFNESFADRWFDISSKVSKEDLGLVAVTCWAIWMDRNKFVHEDPIPPANIRSQWILEYLRSFVEANSKAGIMHQSLANHSSPSLS

Query:  -EIWSPPPTDFWKINSDAAWKDHPPEMGIGLVCRNSEGAIIEASSSFSPSVPEAPCAELKAILMGIRRAQALGCNKIIIESDCQIAINFLTKSSEVWSIA
         + W PPP          A K      G+G+V RN+ G  + A      +   A   EL A + G+R A  +G    I+E D Q  +N +  + E   I 
Subjt:  -EIWSPPPTDFWKINSDAAWKDHPPEMGIGLVCRNSEGAIIEASSSFSPSVPEAPCAELKAILMGIRRAQALGCNKIIIESDCQIAINFLTKSSEVWSIA

Query:  EGLVEEIWAMADGLKEVKFQFVPRKGNRVADYLAKRAKLSKCSDF--WDNNFPDWLSLLVENDRSSL
          L+EE+  + +  + V   + PR GN+VA  LA+ A    C++F  W    P WL  ++E D  SL
Subjt:  EGLVEEIWAMADGLKEVKFQFVPRKGNRVADYLAKRAKLSKCSDF--WDNNFPDWLSLLVENDRSSL

SwissProt top hits

e value

%identity

Alignment

P93295 Uncharacterized mitochondrial protein AtMg00310

7.9e-31

42.86

Show/hide

Query:  MSVFQFPKKLCEDITRNFSRFWWGSNDDKKKLHWCSWDKLCLPK-SLGGLNFRDLEGFNKALVAKQVWRLMAYPNSLVSRFMKSLYFKNSGILDADIGKN
        MS F+  K LC+ +T   + FWW S ++K+K+ W +W KLC  K   GGL FRDL  FN+AL+AKQ +R++  P++L+SR ++S YF +S +++  +G  
Subjt:  MSVFQFPKKLCEDITRNFSRFWWGSNDDKKKLHWCSWDKLCLPK-SLGGLNFRDLEGFNKALVAKQVWRLMAYPNSLVSRFMKSLYFKNSGILDADIGKN

Query:  PSYIWKSFLWGRDLLIKGLRFRLGNGEKIFMFEDPWILKE
        PSY W+S + GR+LL +GL   +G+G    ++ D WI+ E
Subjt:  PSYIWKSFLWGRDLLIKGLRFRLGNGEKIFMFEDPWILKE

Arabidopsis top hits

e value

%identity

Alignment

AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein

2.3e-25

27.1

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Query:  CPICSNHVETTDHILFTCKRAKDIWNLTFKNVSLNVVFNES-FADRWFDISSKVSKEDLG----LVAVTCWAIWMDRNKFVHEDPIPPANIRSQWILEYL
        C  C +  ET +H+LF C  A+ +W ++         + +S +A+ ++ ++ +V    LG    LV    W +W  RN+ + +     A    + +   +
Subjt:  CPICSNHVETTDHILFTCKRAKDIWNLTFKNVSLNVVFNES-FADRWFDISSKVSKEDLG----LVAVTCWAIWMDRNKFVHEDPIPPANIRSQWILEYL

Query:  RSFVEANSKAGIMHQSLANHSSPSLSEIWSPPPTDFWKINSDAAWKDHPPEMGIGLVCRNSEGAIIEASSSFSPSVPEAPCAELKAILMGIRRAQALGCN
          F E +++  +  ++       +LS  W  PP  + K N+DA W+   P  GIG + RN  G ++   +   P       AEL+A+   +         
Subjt:  RSFVEANSKAGIMHQSLANHSSPSLSEIWSPPPTDFWKINSDAAWKDHPPEMGIGLVCRNSEGAIIEASSSFSPSVPEAPCAELKAILMGIRRAQALGCN

Query:  KIIIESDCQIAINFLTKSSEVWSIAEGLVEEIWAMADGLKEVKFQFVPRKGNRVADYLAKRA
        +II ESD Q  +N L  S + W   +  +E+I  +    +EVKF+F PR GN+VAD +A+ +
Subjt:  KIIIESDCQIAINFLTKSSEVWSIAEGLVEEIWAMADGLKEVKFQFVPRKGNRVADYLAKRA

AT3G09510.1 Ribonuclease H-like superfamily protein

3.9e-49

29.74

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Query:  MKSLYFKNSGILDADIGKNPSYIWKSFLWGRDLLIKGLRFRLGNGEKIFMFEDPWILKEINFKLVCIDRNFLNMRVVDFITPSGD---WDISKLDQAVLS
        MK+ YFK+  ILDA + K  SY W S L G  LL KG R  +G+G+ I +  D  I+     + +  +  +  M + +     G    WD SK+ Q V  
Subjt:  MKSLYFKNSGILDADIGKNPSYIWKSFLWGRDLLIKGLRFRLGNGEKIFMFEDPWILKEINFKLVCIDRNFLNMRVVDFITPSGD---WDISKLDQAVLS

Query:  SDVEVIRKIPISNHSE-DKLVWHYDKLGRYTVKSGYKLFM---KAKIDGISSSSNSMSHIWKSIWNLKIPSKIRHFCWKALNNTLPTKFNLKNRGVDNDM
        SD   I +I ++   + DK++W+Y+  G YTV+SGY L        I  I+    S+  +   IWNL I  K++HF W+AL+  L T   L  RG+  D 
Subjt:  SDVEVIRKIPISNHSE-DKLVWHYDKLGRYTVKSGYKLFM---KAKIDGISSSSNSMSHIWKSIWNLKIPSKIRHFCWKALNNTLPTKFNLKNRGVDNDM

Query:  FCPICSNHVETTDHILFTCKRAKDIWNLTFKNVSLNVVFNESFADRWFDISSKVSKEDLG-----LVAVTCWAIWMDRNKFV----HEDPIPPANIRSQW
         CP C    E+ +H LFTC  A   W L+  ++  N + +  F +   +I + V    +      L     W IW  RN  V     E P          
Subjt:  FCPICSNHVETTDHILFTCKRAKDIWNLTFKNVSLNVVFNESFADRWFDISSKVSKEDLG-----LVAVTCWAIWMDRNKFV----HEDPIPPANIRSQW

Query:  ILEYLRSFVEANSKAGIMHQSLANHSSPSLSEIWSPPPTDFWKINSDAAWKDHPPEMGIGLVCRNSEGAIIEASSSFSPSVPEAPCAELKAILMGIRRAQ
          ++L +  +++ K     + +A +        W  PP  + K N DA +     E   G + RN  G  I   S           AE KA+L  +++  
Subjt:  ILEYLRSFVEANSKAGIMHQSLANHSSPSLSEIWSPPPTDFWKINSDAAWKDHPPEMGIGLVCRNSEGAIIEASSSFSPSVPEAPCAELKAILMGIRRAQ

Query:  ALGCNKIIIESDCQIAINFLTKSSEVWSIAEGLVEEIWAMADGLKEVKFQFVPRKGNRVADYLAKRAKLSKCSDFWDNNFPDWLSLLVEND
          G  ++ +E DCQ  IN +   S   S+A  L E+I   A+    ++F F+ RKGN++A  LAK             + P WL     ND
Subjt:  ALGCNKIIIESDCQIAINFLTKSSEVWSIAEGLVEEIWAMADGLKEVKFQFVPRKGNRVADYLAKRAKLSKCSDFWDNNFPDWLSLLVEND

AT3G25270.1 Ribonuclease H-like superfamily protein

4.8e-23

24.21

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Query:  SHIWKSIWNLKIPSKIRHFCWKALNNTLPTKFNLKNRGVDNDMFCPICSNHVETTDHILFTCKRAKDIWNLT------------FKNVSLNVVFNESFAD
        + I   IW LK   KI+HF WK L+  L T  NLK R + N   C  C    ET+ H+ F C  A+ +W  +                 + ++ +   A+
Subjt:  SHIWKSIWNLKIPSKIRHFCWKALNNTLPTKFNLKNRGVDNDMFCPICSNHVETTDHILFTCKRAKDIWNLT------------FKNVSLNVVFNESFAD

Query:  RWFDISSKVSKEDLGLVAVTCWAIWMDRNKFVHEDPIPPANIRSQWILEYLRSFVEANSKAGIMHQSL------ANHSSPSLSEI-WSPPPTDFWKINSD
        R          +   L     W +W  RN+ V +      +I  Q  L+  R+ V+         QSL      + H  P+++   W  PP+ + K N D
Subjt:  RWFDISSKVSKEDLGLVAVTCWAIWMDRNKFVHEDPIPPANIRSQWILEYLRSFVEANSKAGIMHQSL------ANHSSPSLSEI-WSPPPTDFWKINSD

Query:  AAWKDHPPEMGIGLVCRNSEGAIIEASSSFSPSVPEAPCAELKAILMGIRRAQALGCNKIIIESDCQIAINFLTKSSEVWSIAEGLVEEIWAMADGLKEV
         A+         G + R+  G  + +  +   +  ++  +E +A+++ ++ A + G  K+I E D +  +  L  + ++       + E        +E 
Subjt:  AAWKDHPPEMGIGLVCRNSEGAIIEASSSFSPSVPEAPCAELKAILMGIRRAQALGCNKIIIESDCQIAINFLTKSSEVWSIAEGLVEEIWAMADGLKEV

Query:  KFQFVPRKGNRVADYLAK
         F++VPR  N+ AD LAK
Subjt:  KFQFVPRKGNRVADYLAK

AT4G29090.1 Ribonuclease H-like superfamily protein

4.7e-71

30.38

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Query:  MSVFQFPKKLCEDITRNFSRFWWGSNDDKKKLHWCSWDKLCLPKSLGGLNFRDLEGFNKALVAKQVWRLMAYPNSLVSRFMKSLYFKNSGILDADIGKNP
        M+ F  PK +C+ I    + FWW +  + K +HW +WD L   K+ GG+ F+D+E FN AL+ KQ+WR+++ P SL+++  KS YF  S  L+A +G  P
Subjt:  MSVFQFPKKLCEDITRNFSRFWWGSNDDKKKLHWCSWDKLCLPKSLGGLNFRDLEGFNKALVAKQVWRLMAYPNSLVSRFMKSLYFKNSGILDADIGKNP

Query:  SYIWKSFLWGRDLLIKGLRFRLGNGEKIFMFEDPWILKEINFKLVCIDR----NFLN----MRVVDFITPSG-DWDISKLDQAVLSSDVEVIRKI-PISN
        S++WKS    +++L +G R  +GNGE I ++   W+  +     + + R     + +    ++V D I  SG +W    ++      + ++I ++ P   
Subjt:  SYIWKSFLWGRDLLIKGLRFRLGNGEKIFMFEDPWILKEINFKLVCIDR----NFLN----MRVVDFITPSG-DWDISKLDQAVLSSDVEVIRKI-PISN

Query:  HSEDKLVWHYDKLGRYTVKSGYKLFMKAKIDGISS----SSNSMSHIWKSIWNLKIPSKIRHFCWKALNNTLPTKFNLKNRGVDNDMFCPICSNHVETTD
           D   W Y   G YTVKSGY +  +  I+  SS    S  S++ I++ IW  +   KI+HF WK L+N+LP    L  R +  +  C  C +  ET +
Subjt:  HSEDKLVWHYDKLGRYTVKSGYKLFMKAKIDGISS----SSNSMSHIWKSIWNLKIPSKIRHFCWKALNNTLPTKFNLKNRGVDNDMFCPICSNHVETTD

Query:  HILFTCKRAKDIWNLTFKNVSLNVVFNESFADRWFDI-----SSKVSKEDLGLVAVTCWAIWMDRNKFV---HEDPIPPANIRSQWILEYLRSFVEANSK
        H+LF C  A+  W ++   + L   + +S     + +      +   ++   LV    W +W +RN+ V    E        R++  LE  R   EA S 
Subjt:  HILFTCKRAKDIWNLTFKNVSLNVVFNESFADRWFDI-----SSKVSKEDLGLVAVTCWAIWMDRNKFV---HEDPIPPANIRSQWILEYLRSFVEANSK

Query:  AGIMHQSLANHSSPSLSEIWSPPPTDFWKINSDAAWKDHPPEMGIGLVCRNSEGAIIEASSSFSPSVPEAPCAELKAILMGIRRAQALGCNKIIIESDCQ
         G   Q   N SS      W PPP  + K N+DA W       GIG V RN +G +    +   P +     AEL+A+   +        N +I ESD Q
Subjt:  AGIMHQSLANHSSPSLSEIWSPPPTDFWKINSDAAWKDHPPEMGIGLVCRNSEGAIIEASSSFSPSVPEAPCAELKAILMGIRRAQALGCNKIIIESDCQ

Query:  IAINFLTKSSEVWSIAEGLVEEIWAMADGLKEVKFQFVPRKGNRVADYLAKRA
        + I  L  + E+W   +  ++++  +     EVKF F+PR+GN +A+ +A+ +
Subjt:  IAINFLTKSSEVWSIAEGLVEEIWAMADGLKEVKFQFVPRKGNRVADYLAKRA

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

5.6e-32

42.86

Show/hide

Query:  MSVFQFPKKLCEDITRNFSRFWWGSNDDKKKLHWCSWDKLCLPK-SLGGLNFRDLEGFNKALVAKQVWRLMAYPNSLVSRFMKSLYFKNSGILDADIGKN
        MS F+  K LC+ +T   + FWW S ++K+K+ W +W KLC  K   GGL FRDL  FN+AL+AKQ +R++  P++L+SR ++S YF +S +++  +G  
Subjt:  MSVFQFPKKLCEDITRNFSRFWWGSNDDKKKLHWCSWDKLCLPK-SLGGLNFRDLEGFNKALVAKQVWRLMAYPNSLVSRFMKSLYFKNSGILDADIGKN

Query:  PSYIWKSFLWGRDLLIKGLRFRLGNGEKIFMFEDPWILKE
        PSY W+S + GR+LL +GL   +G+G    ++ D WI+ E
Subjt:  PSYIWKSFLWGRDLLIKGLRFRLGNGEKIFMFEDPWILKE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAGTGTTTTCCAATTTCCTAAAAAGCTTTGTGAGGATATTACTAGGAACTTTTCGAGATTTTGGTGGGGTTCAAATGATGATAAAAAGAAATTGCATTGGTGTAGTTG
GGACAAGCTTTGCCTTCCTAAAAGTCTTGGGGGTTTAAATTTTAGGGATTTGGAAGGGTTTAATAAAGCCCTTGTTGCTAAACAAGTTTGGAGGTTAATGGCTTATCCAA
ATTCTCTAGTTTCTAGATTTATGAAGAGTTTGTATTTTAAAAATAGTGGTATCCTGGATGCTGATATTGGGAAGAACCCTTCATATATTTGGAAAAGTTTTTTGTGGGGC
AGAGACCTTCTTATTAAAGGCTTGAGGTTTAGGCTTGGTAATGGAGAGAAGATTTTCATGTTTGAGGACCCCTGGATTCTTAAGGAAATCAATTTTAAACTTGTCTGTAT
TGATAGAAATTTTTTAAACATGAGGGTTGTGGACTTCATTACGCCTAGTGGGGATTGGGATATTTCAAAACTAGATCAAGCTGTTCTTAGCAGTGATGTGGAGGTTATTA
GAAAGATTCCCATTAGTAATCATTCAGAAGATAAATTGGTGTGGCATTATGATAAACTAGGGAGATACACAGTTAAGAGCGGGTACAAGCTTTTCATGAAAGCAAAAATT
GATGGTATCTCTTCTAGCTCCAATTCTATGAGCCATATATGGAAATCTATTTGGAATTTAAAAATCCCTTCTAAAATCAGGCATTTCTGCTGGAAGGCTTTAAATAATAC
TCTCCCCACAAAATTTAATCTAAAGAACAGAGGGGTGGATAACGACATGTTTTGCCCTATTTGCTCTAATCATGTAGAAACTACGGATCATATATTATTCACATGTAAAA
GAGCTAAAGATATATGGAATCTTACCTTTAAAAATGTTTCTCTGAATGTTGTTTTTAATGAGAGTTTTGCGGACAGGTGGTTTGATATCAGCTCCAAAGTTTCGAAAGAG
GATCTAGGGCTTGTTGCGGTCACCTGTTGGGCTATTTGGATGGACAGAAACAAATTTGTTCATGAAGATCCTATTCCTCCAGCTAACATAAGAAGTCAATGGATTCTAGA
GTACCTGAGGTCCTTCGTTGAAGCTAATTCAAAAGCTGGAATCATGCATCAATCTCTCGCGAATCATTCATCCCCTTCTTTGAGCGAAATTTGGTCTCCTCCTCCAACTG
ATTTTTGGAAGATCAACTCTGATGCGGCTTGGAAAGACCACCCCCCTGAGATGGGGATTGGTTTAGTTTGCAGAAACTCTGAAGGTGCCATTATTGAAGCCTCAAGCTCG
TTTTCTCCATCGGTTCCAGAAGCTCCCTGTGCTGAATTAAAAGCTATTTTGATGGGTATTAGAAGAGCTCAAGCTTTGGGATGTAATAAAATCATTATTGAATCCGACTG
TCAAATCGCAATTAATTTCTTGACTAAATCATCTGAAGTCTGGAGCATTGCAGAAGGCCTTGTAGAAGAAATTTGGGCCATGGCTGATGGGCTCAAGGAAGTTAAATTTC
AATTTGTTCCAAGGAAAGGGAATAGAGTAGCTGATTATCTAGCTAAAAGAGCTAAATTGTCCAAATGTAGTGATTTCTGGGATAATAATTTCCCAGATTGGTTGTCTTTG
TTGGTCGAGAATGACCGTTCATCTTTAGCCCTCGTGGCGTTTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSVFQFPKKLCEDITRNFSRFWWGSNDDKKKLHWCSWDKLCLPKSLGGLNFRDLEGFNKALVAKQVWRLMAYPNSLVSRFMKSLYFKNSGILDADIGKNPSYIWKSFLWG
RDLLIKGLRFRLGNGEKIFMFEDPWILKEINFKLVCIDRNFLNMRVVDFITPSGDWDISKLDQAVLSSDVEVIRKIPISNHSEDKLVWHYDKLGRYTVKSGYKLFMKAKI
DGISSSSNSMSHIWKSIWNLKIPSKIRHFCWKALNNTLPTKFNLKNRGVDNDMFCPICSNHVETTDHILFTCKRAKDIWNLTFKNVSLNVVFNESFADRWFDISSKVSKE
DLGLVAVTCWAIWMDRNKFVHEDPIPPANIRSQWILEYLRSFVEANSKAGIMHQSLANHSSPSLSEIWSPPPTDFWKINSDAAWKDHPPEMGIGLVCRNSEGAIIEASSS
FSPSVPEAPCAELKAILMGIRRAQALGCNKIIIESDCQIAINFLTKSSEVWSIAEGLVEEIWAMADGLKEVKFQFVPRKGNRVADYLAKRAKLSKCSDFWDNNFPDWLSL
LVENDRSSLALVAF

Lag0013773 (gene) of Sponge gourd (AG-4) v1 genome