CuGenDBv2

Gene ID	Lag0013823
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Transmembrane protein, putative
Genome location	chr1:53038978..53042289
RNA-Seq Expression	Lag0013823
Synteny	Lag0013823
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_011658212.1 uncharacterized protein LOC101204514 [Cucumis sativus]

1.4e-65

96.97

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Query:  SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDIATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTILHVSMA
        SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGI+IATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMV+FVKDREFQGFFAKGCT+LHVSMA
Subjt:  SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDIATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTILHVSMA

Query:  MWRFYFERRVEDLAWDWLRQIVGDILLALSWL
        MWRFYFERRVEDLAWDWLRQIVGDILLALSW+
Subjt:  MWRFYFERRVEDLAWDWLRQIVGDILLALSWL

XP_022142070.1 uncharacterized protein LOC111012289 [Momordica charantia]

5.6e-67

96.3

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Query:  MGSSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDIATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTILHV
        MGSSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGID ATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKD+EFQGFFAKGCT+LHV
Subjt:  MGSSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDIATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTILHV

Query:  SMAMWRFYFERRVEDLAWDWLRQIVGDILLALSWL
        SMAMWRFYFERRVED+AWDWLRQIVGDILLALSW+
Subjt:  SMAMWRFYFERRVEDLAWDWLRQIVGDILLALSWL

XP_022926441.1 uncharacterized protein LOC111433593 [Cucurbita moschata]

1.9e-67

97.04

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Query:  MGSSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDIATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTILHV
        MGSSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDIATKLMGSTPHDQLL++TSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCT+LHV
Subjt:  MGSSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDIATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTILHV

Query:  SMAMWRFYFERRVEDLAWDWLRQIVGDILLALSWL
        SMAMWRFYFERRVEDLAWDWLRQIVGDILLALSW+
Subjt:  SMAMWRFYFERRVEDLAWDWLRQIVGDILLALSWL

XP_023003187.1 uncharacterized protein LOC111496876 [Cucurbita maxima]

2.1e-66

95.56

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Query:  MGSSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDIATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTILHV
        MGSSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDIATKLMGSTPHDQLL++TSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGC +LHV
Subjt:  MGSSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDIATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTILHV

Query:  SMAMWRFYFERRVEDLAWDWLRQIVGDILLALSWL
        SMAMWRFYFERRVEDL+WDWLRQIVGDILLALSW+
Subjt:  SMAMWRFYFERRVEDLAWDWLRQIVGDILLALSWL

XP_038881843.1 uncharacterized protein LOC120073208 [Benincasa hispida]

1.8e-65

96.97

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Query:  SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDIATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTILHVSMA
        SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGID ATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFV+DREFQGFFAKGCT+LHVSMA
Subjt:  SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDIATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTILHVSMA

Query:  MWRFYFERRVEDLAWDWLRQIVGDILLALSWL
        MWRFYFERRVEDLAWDWLRQIVGDILLALSW+
Subjt:  MWRFYFERRVEDLAWDWLRQIVGDILLALSWL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KHM7 Uncharacterized protein

6.6e-66

96.97

Show/hide

Query:  SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDIATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTILHVSMA
        SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGI+IATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMV+FVKDREFQGFFAKGCT+LHVSMA
Subjt:  SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDIATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTILHVSMA

Query:  MWRFYFERRVEDLAWDWLRQIVGDILLALSWL
        MWRFYFERRVEDLAWDWLRQIVGDILLALSW+
Subjt:  MWRFYFERRVEDLAWDWLRQIVGDILLALSWL

A0A5D3CSC4 Uncharacterized protein

7.3e-65

95.45

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Query:  SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDIATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTILHVSMA
        SSSSTFPVIC LHSVVAITSGTLMMFYMKEIYTIGHGI+ ATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMV+FVKDREFQGFFAKGCT+LHVSMA
Subjt:  SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDIATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTILHVSMA

Query:  MWRFYFERRVEDLAWDWLRQIVGDILLALSWL
        MWRFYFERRVEDLAWDWLRQIVGDILLALSW+
Subjt:  MWRFYFERRVEDLAWDWLRQIVGDILLALSWL

A0A6J1CJW0 uncharacterized protein LOC111012289

2.7e-67

96.3

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Query:  MGSSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDIATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTILHV
        MGSSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGID ATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKD+EFQGFFAKGCT+LHV
Subjt:  MGSSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDIATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTILHV

Query:  SMAMWRFYFERRVEDLAWDWLRQIVGDILLALSWL
        SMAMWRFYFERRVED+AWDWLRQIVGDILLALSW+
Subjt:  SMAMWRFYFERRVEDLAWDWLRQIVGDILLALSWL

A0A6J1EEX8 uncharacterized protein LOC111433593

9.3e-68

97.04

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Query:  MGSSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDIATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTILHV
        MGSSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDIATKLMGSTPHDQLL++TSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCT+LHV
Subjt:  MGSSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDIATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTILHV

Query:  SMAMWRFYFERRVEDLAWDWLRQIVGDILLALSWL
        SMAMWRFYFERRVEDLAWDWLRQIVGDILLALSW+
Subjt:  SMAMWRFYFERRVEDLAWDWLRQIVGDILLALSWL

A0A6J1KLR6 uncharacterized protein LOC111496876

1.0e-66

95.56

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Query:  MGSSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDIATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTILHV
        MGSSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDIATKLMGSTPHDQLL++TSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGC +LHV
Subjt:  MGSSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDIATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTILHV

Query:  SMAMWRFYFERRVEDLAWDWLRQIVGDILLALSWL
        SMAMWRFYFERRVEDL+WDWLRQIVGDILLALSW+
Subjt:  SMAMWRFYFERRVEDLAWDWLRQIVGDILLALSWL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G53035.1 unknown protein

7.8e-43

63.16

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Query:  SSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDIATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTILHVSM
        S + S F VIC+LHS++A+TSGTLMMFY ++    G G +IA+KL GSTPHD+LLI+ S SFSGLLLFAIG +LFMVSFVKD+EF  FFA G  IL+V M
Subjt:  SSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDIATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTILHVSM

Query:  AMWRFYFERRVEDLAWDWLRQIVGDILLALSWL
        AMWR  FE ++EDLA++W +Q +GDI LA+SW+
Subjt:  AMWRFYFERRVEDLAWDWLRQIVGDILLALSWL

AT3G15358.1 unknown protein

2.5e-41

62.6

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Query:  SSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDIATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTILHVSMAM
        +S  F VIC+LHS++A+TSGTLMMFY ++    GHG DIA KL GSTPHD+ LI+ S SFSGLLLFAIG +LFMVSFVKDREF  FFA G  IL++ MA+
Subjt:  SSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDIATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTILHVSMAM

Query:  WRFYFERRVEDLAWDWLRQIVGDILLALSWL
        WR  FE ++EDLA++  +Q +GDI LA+SW+
Subjt:  WRFYFERRVEDLAWDWLRQIVGDILLALSWL

Sequences

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CDS sequence

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ATGGGATCGTCGTCGTCGTCGACTTTCCCCGTGATCTGCCTTCTTCACTCTGTCGTCGCAATCACGAGCGGGACGCTTATGATGTTCTACATGAAGGAGATTTACACGAT
TGGCCATGGGATCGACATCGCCACTAAGTTAATGGGCTCTACGCCGCACGATCAGCTCCTGATTCGGACCTCCGATTCGTTTTCCGGGTTGCTCCTCTTCGCAATCGGGT
TTCTTCTCTTCATGGTTTCGTTCGTCAAGGACAGGGAATTTCAAGGGTTTTTCGCCAAGGGATGTACGATTCTTCACGTATCAATGGCGATGTGGAGATTCTACTTTGAG
CGAAGAGTGGAGGATCTGGCCTGGGATTGGCTGAGGCAGATTGTTGGTGACATTCTTCTTGCCCTATCTTGGTTAACTGTTAAGAAGGATTGGCTTTTAGAGTTTATTGC
TGAAATTCTGTACACTTCTGGTGTTATTAGATACTTGTGTTTTGAAGAGGACTGTTTTGCTCAGACTAGGAGCGACTGCTTGCATTTTTGGCACGAAGATGACAATGCCG
AGGACGATGAAATGAAGGAGCAAAAGCTTACAATCGAAGCTCTGCCGGCGGAGTTTCGGATTCTGGTGGAGTTTCAGAGAGAGAGCTTTTAA

mRNA sequence

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Protein sequence

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MGSSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDIATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTILHVSMAMWRFYFE
RRVEDLAWDWLRQIVGDILLALSWLTVKKDWLLEFIAEILYTSGVIRYLCFEEDCFAQTRSDCLHFWHEDDNAEDDEMKEQKLTIEALPAEFRILVEFQRESF

Lag0013823 (gene) of Sponge gourd (AG-4) v1 genome