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Lag0013833 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0013833
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSquamosa promoter-binding-like protein
Genome locationchr1:53099362..53101860
RNA-Seq ExpressionLag0013833
SyntenyLag0013833
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009908 - flower development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR004333 - SBP domain
IPR036893 - SBP domain superfamily
IPR044817 - Squamosa promoter-binding-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026565.1 Squamosa promoter-binding protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-5074.83Show/hide
Query:  MANSGDQGWEDILEEEEEDDDDNDNDDN--------NQRRPLSGGRYGSGGGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFC
        M +SGDQGW + +EEEEE+++D+D+DD+         ++R  SG R GSGGGR++V RCQAD CN DL+GARAYHRRHKVCEFHSKAAVVILAGLEQRFC
Subjt:  MANSGDQGWEDILEEEEEDDDDNDNDDN--------NQRRPLSGGRYGSGGGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFC

Query:  QQCSRFHAVSEFDETKRSCRKRLAGHNERRRKNLPDFHGQSST
        QQCSRFH+VSEFDETKRSCR+RLAGHNERRRKNLPDF GQSST
Subjt:  QQCSRFHAVSEFDETKRSCRKRLAGHNERRRKNLPDFHGQSST

XP_004134953.1 squamosa promoter-binding protein 1 [Cucumis sativus]3.9e-5077.46Show/hide
Query:  MANSGDQGWEDILEEEEEDDDDNDNDD----NNQRRPLSG---GRYGSGGGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQ
        MANS DQGWED++   ++DDDDNDN++    +N+RR  SG    R G GGGRSTVARCQADGCNADL+GA+ YHRRHKVCEFHS+AAVVILAGLEQRFCQ
Subjt:  MANSGDQGWEDILEEEEEDDDDNDNDD----NNQRRPLSG---GRYGSGGGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQ

Query:  QCSRFHAVSEFDETKRSCRKRLAGHNERRRKNLPDFHGQSST
        QCSRFHA+SEFD+TKRSCR RLAGHNERRRK LPDFHGQSST
Subjt:  QCSRFHAVSEFDETKRSCRKRLAGHNERRRKNLPDFHGQSST

XP_022926740.1 squamosa promoter-binding-like protein 3 [Cucurbita moschata]5.1e-5074.13Show/hide
Query:  MANSGDQGWEDILEEEEEDDDDNDNDDN--------NQRRPLSGGRYGSGGGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFC
        M +SGDQGW + +EEEEE++++ D+DD+         ++R  SG R GSGGGR++V RCQAD CN DL+GARAYHRRHKVCEFHSKAAVVILAGLEQRFC
Subjt:  MANSGDQGWEDILEEEEEDDDDNDNDDN--------NQRRPLSGGRYGSGGGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFC

Query:  QQCSRFHAVSEFDETKRSCRKRLAGHNERRRKNLPDFHGQSST
        QQCSRFH+VSEFDETKRSCR+RLAGHNERRRKNLPDF GQSST
Subjt:  QQCSRFHAVSEFDETKRSCRKRLAGHNERRRKNLPDFHGQSST

XP_023004048.1 squamosa promoter-binding-like protein 3 [Cucurbita maxima]2.1e-5176.6Show/hide
Query:  MANSGDQGWEDILEEEEEDDDDNDND------DNNQRRPLSGGRYGSGGGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQ
        M NSGDQGW D +EEEEE+++++D+D      D  ++R +S  R GSGGGR++VARCQAD CN DL+GARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQ
Subjt:  MANSGDQGWEDILEEEEEDDDDNDND------DNNQRRPLSGGRYGSGGGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQ

Query:  CSRFHAVSEFDETKRSCRKRLAGHNERRRKNLPDFHGQSST
        CSRFH+VSEFDETKRSCR+RLAGHNERRRKNLPDF GQSST
Subjt:  CSRFHAVSEFDETKRSCRKRLAGHNERRRKNLPDFHGQSST

XP_038880830.1 squamosa promoter-binding protein 1-like [Benincasa hispida]1.0e-5077.86Show/hide
Query:  MANSGDQGWEDILEEEEEDDDDND-----NDDNNQRRPLSGGRYGSGGGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQC
        M NS DQ WED++ EE++D+DDN+      D+  +R  L+GGR GSGGGR TVARCQADGCNADLS AR YHRRHKVCEFH+KAAVVILAGLEQRFCQQC
Subjt:  MANSGDQGWEDILEEEEEDDDDND-----NDDNNQRRPLSGGRYGSGGGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQC

Query:  SRFHAVSEFDETKRSCRKRLAGHNERRRKNLPDFHGQSST
        SRFHAVSEFD+TKRSCR+RLAGHNERRRK LPDFHGQSST
Subjt:  SRFHAVSEFDETKRSCRKRLAGHNERRRKNLPDFHGQSST

TrEMBL top hitse value%identityAlignment
A0A0A0KK74 SBP-type domain-containing protein1.9e-5077.46Show/hide
Query:  MANSGDQGWEDILEEEEEDDDDNDNDD----NNQRRPLSG---GRYGSGGGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQ
        MANS DQGWED++   ++DDDDNDN++    +N+RR  SG    R G GGGRSTVARCQADGCNADL+GA+ YHRRHKVCEFHS+AAVVILAGLEQRFCQ
Subjt:  MANSGDQGWEDILEEEEEDDDDNDNDD----NNQRRPLSG---GRYGSGGGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQ

Query:  QCSRFHAVSEFDETKRSCRKRLAGHNERRRKNLPDFHGQSST
        QCSRFHA+SEFD+TKRSCR RLAGHNERRRK LPDFHGQSST
Subjt:  QCSRFHAVSEFDETKRSCRKRLAGHNERRRKNLPDFHGQSST

A0A1S3AZN8 squamosa promoter-binding protein 13.2e-5077.46Show/hide
Query:  MANSGDQGWEDILEEEEEDDDDNDNDD----NNQRRPLSG---GRYGSGGGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQ
        MANS D  WED++  +++DDDDND ++    +N+RR  SG   GR G GGGRSTVARCQADGCNADL+GAR YHRRHKVCEFH+KAAVVILAGLEQRFCQ
Subjt:  MANSGDQGWEDILEEEEEDDDDNDNDD----NNQRRPLSG---GRYGSGGGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQ

Query:  QCSRFHAVSEFDETKRSCRKRLAGHNERRRKNLPDFHGQSST
        QCSRFHAVSEFD+TKRSCR RLAGHNERRRK LPDFHGQSST
Subjt:  QCSRFHAVSEFDETKRSCRKRLAGHNERRRKNLPDFHGQSST

A0A6J1CK81 squamosa promoter-binding protein 18.0e-4174.13Show/hide
Query:  MANSGDQGWEDILEEEEEDDDDN------DNDDNNQRRPLSGGRYGSGGGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQ
        MA+ G    ED  EEEEE+D           ++   RR LSGGR G G GRSTVARCQADGCNADLSGAR YHRRHKVCEFH+KAAVVILAGLEQRFCQQ
Subjt:  MANSGDQGWEDILEEEEEDDDDN------DNDDNNQRRPLSGGRYGSGGGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQ

Query:  CSRFHAVSEFDETKRSCRKRLAGHNERRRKNL-PDFH-GQSST
        CSRFHAVSEFDETKRSCR+RLAGHNERRRK+L  +FH GQSST
Subjt:  CSRFHAVSEFDETKRSCRKRLAGHNERRRKNL-PDFH-GQSST

A0A6J1EFR3 Squamosa promoter-binding-like protein2.5e-5074.13Show/hide
Query:  MANSGDQGWEDILEEEEEDDDDNDNDDN--------NQRRPLSGGRYGSGGGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFC
        M +SGDQGW + +EEEEE++++ D+DD+         ++R  SG R GSGGGR++V RCQAD CN DL+GARAYHRRHKVCEFHSKAAVVILAGLEQRFC
Subjt:  MANSGDQGWEDILEEEEEDDDDNDNDDN--------NQRRPLSGGRYGSGGGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFC

Query:  QQCSRFHAVSEFDETKRSCRKRLAGHNERRRKNLPDFHGQSST
        QQCSRFH+VSEFDETKRSCR+RLAGHNERRRKNLPDF GQSST
Subjt:  QQCSRFHAVSEFDETKRSCRKRLAGHNERRRKNLPDFHGQSST

A0A6J1KYC6 Squamosa promoter-binding-like protein1.0e-5176.6Show/hide
Query:  MANSGDQGWEDILEEEEEDDDDNDND------DNNQRRPLSGGRYGSGGGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQ
        M NSGDQGW D +EEEEE+++++D+D      D  ++R +S  R GSGGGR++VARCQAD CN DL+GARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQ
Subjt:  MANSGDQGWEDILEEEEEDDDDNDND------DNNQRRPLSGGRYGSGGGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQ

Query:  CSRFHAVSEFDETKRSCRKRLAGHNERRRKNLPDFHGQSST
        CSRFH+VSEFDETKRSCR+RLAGHNERRRKNLPDF GQSST
Subjt:  CSRFHAVSEFDETKRSCRKRLAGHNERRRKNLPDFHGQSST

SwissProt top hitse value%identityAlignment
A2YFT9 Squamosa promoter-binding-like protein 104.0e-2970.59Show/hide
Query:  GSGGGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRLAGHNERRRK
        G GG      RCQA+GC ADLSGA+ YHRRHKVCE+H+KA+VV  +G +QRFCQQCSRFH ++EFDE KRSCRKRLA HN RRRK
Subjt:  GSGGGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRLAGHNERRRK

P93015 Squamosa promoter-binding-like protein 33.4e-2854.03Show/hide
Query:  GDQGWEDILEEEEEDDDDNDNDDNNQRRPLSGGRYGSGGGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHAVSEF
        G +   ++ EEEEE+++  D D   +   L   + G     S V  CQ + C AD+S A+ YH+RHKVC+FH+KA  V ++GL QRFCQQCSRFHA+SEF
Subjt:  GDQGWEDILEEEEEDDDDNDNDDNNQRRPLSGGRYGSGGGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHAVSEF

Query:  DETKRSCRKRLAGHNERRRKNLPD
        DE KRSCR+RLAGHNERRRK+  D
Subjt:  DETKRSCRKRLAGHNERRRKNLPD

Q0DAE8 Squamosa promoter-binding-like protein 104.0e-2970.59Show/hide
Query:  GSGGGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRLAGHNERRRK
        G GG      RCQA+GC ADLSGA+ YHRRHKVCE+H+KA+VV  +G +QRFCQQCSRFH ++EFDE KRSCRKRLA HN RRRK
Subjt:  GSGGGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRLAGHNERRRK

Q0E3F8 Squamosa promoter-binding-like protein 58.8e-2971.76Show/hide
Query:  RCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRLAGHNERRRKNLPDFHGQSS
        RCQA+GC ADLS A+ YHRRHKVC+FH+KAA V+ AG +QRFCQQCSRFH ++EFDE KRSCRKRL  HN RRRK  P   GQSS
Subjt:  RCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRLAGHNERRRKNLPDFHGQSS

Q38741 Squamosa promoter-binding protein 14.0e-2957.26Show/hide
Query:  EEEEEDDDDNDNDDNNQRRPLSGGRYGSGGGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRK
        +E+ E++DD   D    R     G+  SG   ST   CQ + C A+++ A+ YHRRHKVCEFH+KA VV+ +GL+QRFCQQCSRFH +SEFDE KRSCR+
Subjt:  EEEEEDDDDNDNDDNNQRRPLSGGRYGSGGGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRK

Query:  RLAGHNERRRKNLPDFH
        RLAGHNERRRK+  D H
Subjt:  RLAGHNERRRKNLPDFH

Arabidopsis top hitse value%identityAlignment
AT1G02065.1 squamosa promoter binding protein-like 82.0e-2865.71Show/hide
Query:  DDDNDNDDNNQRRPLSGGRYGSGGGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRLAGHN
        DDD  +    + RP   G  G     ST  RCQA+GCNADLS A+ YHRRHKVCEFHSKA+ V+ AGL QRFCQQCSRFH +SEFD  KRSCRKRLA HN
Subjt:  DDDNDNDDNNQRRPLSGGRYGSGGGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRLAGHN

Query:  ERRRK
         RRRK
Subjt:  ERRRK

AT1G27360.1 squamosa promoter-like 117.7e-2870.73Show/hide
Query:  GGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRLAGHNERRRK
        G    V RCQ DGC  DLS A+ YHR+HKVCE HSK   V ++GLE+RFCQQCSRFHAVSEFDE KRSCRKRL+ HN RRRK
Subjt:  GGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRLAGHNERRRK

AT1G27360.2 squamosa promoter-like 117.7e-2870.73Show/hide
Query:  GGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRLAGHNERRRK
        G    V RCQ DGC  DLS A+ YHR+HKVCE HSK   V ++GLE+RFCQQCSRFHAVSEFDE KRSCRKRL+ HN RRRK
Subjt:  GGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRLAGHNERRRK

AT1G27360.3 squamosa promoter-like 117.7e-2870.73Show/hide
Query:  GGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRLAGHNERRRK
        G    V RCQ DGC  DLS A+ YHR+HKVCE HSK   V ++GLE+RFCQQCSRFHAVSEFDE KRSCRKRL+ HN RRRK
Subjt:  GGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRLAGHNERRRK

AT2G33810.1 squamosa promoter binding protein-like 32.4e-2954.03Show/hide
Query:  GDQGWEDILEEEEEDDDDNDNDDNNQRRPLSGGRYGSGGGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHAVSEF
        G +   ++ EEEEE+++  D D   +   L   + G     S V  CQ + C AD+S A+ YH+RHKVC+FH+KA  V ++GL QRFCQQCSRFHA+SEF
Subjt:  GDQGWEDILEEEEEDDDDNDNDDNNQRRPLSGGRYGSGGGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHAVSEF

Query:  DETKRSCRKRLAGHNERRRKNLPD
        DE KRSCR+RLAGHNERRRK+  D
Subjt:  DETKRSCRKRLAGHNERRRKNLPD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAACTCCGGAGATCAAGGTTGGGAGGACATACTGGAAGAAGAGGAAGAAGACGACGATGACAACGACAACGACGACAACAACCAAAGGAGGCCTTTAAGCGGTGG
TCGATATGGCAGTGGAGGAGGAAGGTCAACGGTGGCGCGTTGCCAAGCCGATGGCTGCAATGCCGATCTGAGCGGTGCCAGGGCGTACCACCGCCGCCACAAGGTATGTG
AGTTCCATTCCAAGGCGGCGGTGGTGATTTTGGCCGGATTGGAACAGCGCTTTTGCCAGCAGTGTAGTAGGTTTCATGCAGTATCAGAGTTCGATGAGACAAAACGAAGC
TGCCGGAAGCGCTTGGCCGGACACAATGAACGGCGGCGAAAAAACTTACCGGACTTCCATGGACAATCCTCCACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAACTCCGGAGATCAAGGTTGGGAGGACATACTGGAAGAAGAGGAAGAAGACGACGATGACAACGACAACGACGACAACAACCAAAGGAGGCCTTTAAGCGGTGG
TCGATATGGCAGTGGAGGAGGAAGGTCAACGGTGGCGCGTTGCCAAGCCGATGGCTGCAATGCCGATCTGAGCGGTGCCAGGGCGTACCACCGCCGCCACAAGGTATGTG
AGTTCCATTCCAAGGCGGCGGTGGTGATTTTGGCCGGATTGGAACAGCGCTTTTGCCAGCAGTGTAGTAGGTTTCATGCAGTATCAGAGTTCGATGAGACAAAACGAAGC
TGCCGGAAGCGCTTGGCCGGACACAATGAACGGCGGCGAAAAAACTTACCGGACTTCCATGGACAATCCTCCACTTGA
Protein sequenceShow/hide protein sequence
MANSGDQGWEDILEEEEEDDDDNDNDDNNQRRPLSGGRYGSGGGRSTVARCQADGCNADLSGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRS
CRKRLAGHNERRRKNLPDFHGQSST