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Lag0013845 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0013845
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein Iojap, chloroplastic
Genome locationchr1:53193039..53193990
RNA-Seq ExpressionLag0013845
SyntenyLag0013845
Gene Ontology termsGO:0017148 - negative regulation of translation (biological process)
GO:0090071 - negative regulation of ribosome biogenesis (biological process)
GO:0009536 - plastid (cellular component)
GO:0043023 - ribosomal large subunit binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600465.1 Protein Iojap, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.6e-2183.61Show/hide
Query:  DYFRVSRKPRKQFLCSCWNGSSFPYQNCIWKTPSSNNFHLKSMESSPLFAIGGEAEDGFLS
        DYFRVS +PRKQF CSCWNGSSF   NCIWK PSSNNFHLKSMESSPLFA+G EAED FLS
Subjt:  DYFRVSRKPRKQFLCSCWNGSSFPYQNCIWKTPSSNNFHLKSMESSPLFAIGGEAEDGFLS

KAG7031113.1 Protein Iojap, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]3.6e-2183.61Show/hide
Query:  DYFRVSRKPRKQFLCSCWNGSSFPYQNCIWKTPSSNNFHLKSMESSPLFAIGGEAEDGFLS
        DYFRVS +PRKQF CSCWNGSSF   NCIWK PSSNNFHLKSMESSPLFA+G EAED FLS
Subjt:  DYFRVSRKPRKQFLCSCWNGSSFPYQNCIWKTPSSNNFHLKSMESSPLFAIGGEAEDGFLS

XP_004147757.1 protein Iojap, chloroplastic [Cucumis sativus]5.5e-2263.1Show/hide
Query:  ARSSTIFGERRRSTMRRRMAVDGDYFRVSRKPRKQFLCSCWNGSSFPYQNCIWKTPSSNNFHLKSMESSPLFAIGGEAEDGFLS
        A + T+FG   R        +  DYF V ++PRKQ  CSCWNGS FPY+NC+W+ PS NNFHLKSMESSPLFA+GGEAEDGFLS
Subjt:  ARSSTIFGERRRSTMRRRMAVDGDYFRVSRKPRKQFLCSCWNGSSFPYQNCIWKTPSSNNFHLKSMESSPLFAIGGEAEDGFLS

XP_022942371.1 protein Iojap, chloroplastic [Cucurbita moschata]3.6e-2183.61Show/hide
Query:  DYFRVSRKPRKQFLCSCWNGSSFPYQNCIWKTPSSNNFHLKSMESSPLFAIGGEAEDGFLS
        DYF VS +PRKQF CSCWNGSSF  QNCIWK PSSNNFHLKSMESSPLFA+G EAED FLS
Subjt:  DYFRVSRKPRKQFLCSCWNGSSFPYQNCIWKTPSSNNFHLKSMESSPLFAIGGEAEDGFLS

XP_023524638.1 protein Iojap, chloroplastic [Cucurbita pepo subsp. pepo]1.0e-2081.97Show/hide
Query:  DYFRVSRKPRKQFLCSCWNGSSFPYQNCIWKTPSSNNFHLKSMESSPLFAIGGEAEDGFLS
        DYF VS +PRKQF CSCWNGSSF  +NCIWK PSSNNFHLKSMESSPLFA+G EAED FLS
Subjt:  DYFRVSRKPRKQFLCSCWNGSSFPYQNCIWKTPSSNNFHLKSMESSPLFAIGGEAEDGFLS

TrEMBL top hitse value%identityAlignment
A0A0A0KVG5 Uncharacterized protein2.7e-2263.1Show/hide
Query:  ARSSTIFGERRRSTMRRRMAVDGDYFRVSRKPRKQFLCSCWNGSSFPYQNCIWKTPSSNNFHLKSMESSPLFAIGGEAEDGFLS
        A + T+FG   R        +  DYF V ++PRKQ  CSCWNGS FPY+NC+W+ PS NNFHLKSMESSPLFA+GGEAEDGFLS
Subjt:  ARSSTIFGERRRSTMRRRMAVDGDYFRVSRKPRKQFLCSCWNGSSFPYQNCIWKTPSSNNFHLKSMESSPLFAIGGEAEDGFLS

A0A5A7V7J6 Oligomerization domain-containing protein4.7e-1973.77Show/hide
Query:  DYFRVSRKPRKQFLCSCWNGSSFPYQNCIWKTPSSNNFHLKSMESSPLFAIGGEAEDGFLS
        +YF V R+PRKQ   SCWNGS FPY+NCIW+ PS+NNF+LKS+ESSPLFA+ GEAEDGFLS
Subjt:  DYFRVSRKPRKQFLCSCWNGSSFPYQNCIWKTPSSNNFHLKSMESSPLFAIGGEAEDGFLS

A0A5D3CY15 Oligomerization domain-containing protein1.9e-2075.41Show/hide
Query:  DYFRVSRKPRKQFLCSCWNGSSFPYQNCIWKTPSSNNFHLKSMESSPLFAIGGEAEDGFLS
        +YF V R+PRKQ  CSCWNGS FPY+NCIW+ PS+NNF+LKS+ESSPLFA+ GEAEDGFLS
Subjt:  DYFRVSRKPRKQFLCSCWNGSSFPYQNCIWKTPSSNNFHLKSMESSPLFAIGGEAEDGFLS

A0A6J1FNP0 protein Iojap, chloroplastic1.7e-2183.61Show/hide
Query:  DYFRVSRKPRKQFLCSCWNGSSFPYQNCIWKTPSSNNFHLKSMESSPLFAIGGEAEDGFLS
        DYF VS +PRKQF CSCWNGSSF  QNCIWK PSSNNFHLKSMESSPLFA+G EAED FLS
Subjt:  DYFRVSRKPRKQFLCSCWNGSSFPYQNCIWKTPSSNNFHLKSMESSPLFAIGGEAEDGFLS

A0A6J1IZC7 protein Iojap, chloroplastic6.5e-2180.33Show/hide
Query:  DYFRVSRKPRKQFLCSCWNGSSFPYQNCIWKTPSSNNFHLKSMESSPLFAIGGEAEDGFLS
        DYFRVS +PRKQF CSCWNGSSF  +NCIWK PSS+NFHLKSMESSPLF++G EAED FLS
Subjt:  DYFRVSRKPRKQFLCSCWNGSSFPYQNCIWKTPSSNNFHLKSMESSPLFAIGGEAEDGFLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTTCGTCGGCGCCGGCGAGTCTCTAGTCGAGAATCGAGAGCTTTTCTGGCCCGATCGTCTACGATCTTCGGAGAGAGGAGAAGAAGTACGATGAGGAGGAGGAT
GGCGGTAGACGGGGATTATTTCAGAGTTTCTCGAAAACCCAGAAAACAATTTTTGTGTTCATGCTGGAATGGGTCCTCTTTTCCATACCAAAACTGCATTTGGAAGACAC
CCTCTTCCAATAACTTCCATTTGAAGTCAATGGAGTCTTCGCCACTGTTCGCCATCGGAGGAGAAGCTGAAGATGGCTTTCTATCCGTATTGTGGATTTGCGGAGGTGAT
TGGGCAGCGGCGGGGGCTATCGCCGGCGAGAAGGGAGGGGGAAAGGAGGGAGAAAGAAAGGGAAAGAAAGAAAGGGAGGATTCGGTGGTGGGGGAGGATGGAGAAGCCGC
CGTCGCGTCCATCGCCGGCGAGGGAAAGGAGGGGGAAAGAAAGGGGTTCGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTTCGTCGGCGCCGGCGAGTCTCTAGTCGAGAATCGAGAGCTTTTCTGGCCCGATCGTCTACGATCTTCGGAGAGAGGAGAAGAAGTACGATGAGGAGGAGGAT
GGCGGTAGACGGGGATTATTTCAGAGTTTCTCGAAAACCCAGAAAACAATTTTTGTGTTCATGCTGGAATGGGTCCTCTTTTCCATACCAAAACTGCATTTGGAAGACAC
CCTCTTCCAATAACTTCCATTTGAAGTCAATGGAGTCTTCGCCACTGTTCGCCATCGGAGGAGAAGCTGAAGATGGCTTTCTATCCGTATTGTGGATTTGCGGAGGTGAT
TGGGCAGCGGCGGGGGCTATCGCCGGCGAGAAGGGAGGGGGAAAGGAGGGAGAAAGAAAGGGAAAGAAAGAAAGGGAGGATTCGGTGGTGGGGGAGGATGGAGAAGCCGC
CGTCGCGTCCATCGCCGGCGAGGGAAAGGAGGGGGAAAGAAAGGGGTTCGGGTGA
Protein sequenceShow/hide protein sequence
MEVRRRRRVSSRESRAFLARSSTIFGERRRSTMRRRMAVDGDYFRVSRKPRKQFLCSCWNGSSFPYQNCIWKTPSSNNFHLKSMESSPLFAIGGEAEDGFLSVLWICGGD
WAAAGAIAGEKGGGKEGERKGKKEREDSVVGEDGEAAVASIAGEGKEGERKGFG