; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0013897 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0013897
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description50S ribosomal protein L34
Genome locationchr1:53569736..53570709
RNA-Seq ExpressionLag0013897
SyntenyLag0013897
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000271 - Ribosomal protein L34


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134668.1 50S ribosomal protein L34, chloroplastic [Cucumis sativus]1.8e-6289.68Show/hide
Query:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSRS-CSVSLNTANNTFARSGLLHCSFLPSSSISCASSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAA
        MAAISVLS+PWVSTG +A RVPSASLV STGSR  CSVSLNT NN  ARSGLLHCSFLPSSS+SC+SSFSGLSLGLDWSSK+ VGQGKGR LVVRAGKAA
Subjt:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSRS-CSVSLNTANNTFARSGLLHCSFLPSSSISCASSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAA

Query:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA
        LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGK A
Subjt:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA

XP_008439748.1 PREDICTED: 50S ribosomal protein L34, chloroplastic [Cucumis melo]1.1e-6492.9Show/hide
Query:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSR-SCSVSLNTANNTFARSGLLHCSFLPSSSISCASSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAA
        MAAISVLSSPWVS G +A RVPSASLVISTGSR SCSVSLNTANNT ARSGLLHCSFLPSSS+SC+SSFSGLSLGLDWSSK+ VGQGKGRSLVVRAGKAA
Subjt:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSR-SCSVSLNTANNTFARSGLLHCSFLPSSSISCASSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAA

Query:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA
        LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGK A
Subjt:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA

XP_022142342.1 50S ribosomal protein L34, chloroplastic [Momordica charantia]4.3e-6189.03Show/hide
Query:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSRS-CSVSLNTANNTFARSGLLHCSFLPSSSISCASSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAA
        MAAISVLS+PWV +G +A RVPSASLVISTGSRS CSVSLNTANNT ARSGLL CSFLPSSS+SC+SSFSG SLGLDW+S+I VGQGKGRSLVVRAGKAA
Subjt:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSRS-CSVSLNTANNTFARSGLLHCSFLPSSSISCASSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAA

Query:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA
        LCQTKRNRSRKSLARTHGFRRRMRTT+GRAVLKRRRAKGRKVLCTKS PSSGKGA
Subjt:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA

XP_022926470.1 50S ribosomal protein L34, chloroplastic-like [Cucurbita moschata]1.9e-5687.01Show/hide
Query:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSRSCSVSLNTANNTFARSGLLHCSFLPSSSISCASSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAAL
        MAAISV+SS  VST     RVPSASLV STGSRS S+SLNTANN  AR GLLHCSFLPSSS+SC SSFSGLSLGLDWS KI VGQGK RSLVVRAGKAAL
Subjt:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSRSCSVSLNTANNTFARSGLLHCSFLPSSSISCASSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAAL

Query:  CQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA
        CQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGK A
Subjt:  CQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA

XP_038883793.1 50S ribosomal protein L34, chloroplastic [Benincasa hispida]4.6e-6392.26Show/hide
Query:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSRS-CSVSLNTANNTFARSGLLHCSFLPSSSISCASSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAA
        MAAISVLSSPWVSTG  A RVPSASLVISTG R  CSVSLNTANNT ARSGLLHCSFL SSS+SC+SSFSGLSLGLDWSSKI VGQGKGRSLVVRAGKAA
Subjt:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSRS-CSVSLNTANNTFARSGLLHCSFLPSSSISCASSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAA

Query:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA
        LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGK A
Subjt:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA

TrEMBL top hitse value%identityAlignment
A0A0A0KI92 Uncharacterized protein8.5e-6389.68Show/hide
Query:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSRS-CSVSLNTANNTFARSGLLHCSFLPSSSISCASSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAA
        MAAISVLS+PWVSTG +A RVPSASLV STGSR  CSVSLNT NN  ARSGLLHCSFLPSSS+SC+SSFSGLSLGLDWSSK+ VGQGKGR LVVRAGKAA
Subjt:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSRS-CSVSLNTANNTFARSGLLHCSFLPSSSISCASSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAA

Query:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA
        LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGK A
Subjt:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA

A0A1S3AZG6 50S ribosomal protein L34, chloroplastic5.3e-6592.9Show/hide
Query:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSR-SCSVSLNTANNTFARSGLLHCSFLPSSSISCASSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAA
        MAAISVLSSPWVS G +A RVPSASLVISTGSR SCSVSLNTANNT ARSGLLHCSFLPSSS+SC+SSFSGLSLGLDWSSK+ VGQGKGRSLVVRAGKAA
Subjt:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSR-SCSVSLNTANNTFARSGLLHCSFLPSSSISCASSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAA

Query:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA
        LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGK A
Subjt:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA

A0A5D3CSJ7 50S ribosomal protein L345.3e-6592.9Show/hide
Query:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSR-SCSVSLNTANNTFARSGLLHCSFLPSSSISCASSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAA
        MAAISVLSSPWVS G +A RVPSASLVISTGSR SCSVSLNTANNT ARSGLLHCSFLPSSS+SC+SSFSGLSLGLDWSSK+ VGQGKGRSLVVRAGKAA
Subjt:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSR-SCSVSLNTANNTFARSGLLHCSFLPSSSISCASSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAA

Query:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA
        LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGK A
Subjt:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA

A0A6J1CMH5 50S ribosomal protein L34, chloroplastic2.1e-6189.03Show/hide
Query:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSRS-CSVSLNTANNTFARSGLLHCSFLPSSSISCASSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAA
        MAAISVLS+PWV +G +A RVPSASLVISTGSRS CSVSLNTANNT ARSGLL CSFLPSSS+SC+SSFSG SLGLDW+S+I VGQGKGRSLVVRAGKAA
Subjt:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSRS-CSVSLNTANNTFARSGLLHCSFLPSSSISCASSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAA

Query:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA
        LCQTKRNRSRKSLARTHGFRRRMRTT+GRAVLKRRRAKGRKVLCTKS PSSGKGA
Subjt:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA

A0A6J1EL73 50S ribosomal protein L34, chloroplastic-like9.1e-5787.01Show/hide
Query:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSRSCSVSLNTANNTFARSGLLHCSFLPSSSISCASSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAAL
        MAAISV+SS  VST     RVPSASLV STGSRS S+SLNTANN  AR GLLHCSFLPSSS+SC SSFSGLSLGLDWS KI VGQGK RSLVVRAGKAAL
Subjt:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSRSCSVSLNTANNTFARSGLLHCSFLPSSSISCASSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAAL

Query:  CQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA
        CQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGK A
Subjt:  CQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA

SwissProt top hitse value%identityAlignment
P82244 50S ribosomal protein L34, chloroplastic3.6e-3464.56Show/hide
Query:  MAAISVLSSPWVSTGGMAA---RVPSASLVISTGSRSCSVSLNTANNTFARSGLLHCSFL-PSSSISCASSFSGLSLGLDWSSKIEVGQGKGRSLVVRAG
        MA +S+L     STG  AA   R PSASL   TGSR+ +  + + N   ARSG LHCSFL PSSS+S  S+FSGLSLGLD +S   V   + R  VVRAG
Subjt:  MAAISVLSSPWVSTGGMAA---RVPSASLVISTGSRSCSVSLNTANNTFARSGLLHCSFL-PSSSISCASSFSGLSLGLDWSSKIEVGQGKGRSLVVRAG

Query:  KAALCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA
        KAALC TKR+RSRKSLARTHGFR RM TT+GRA+LKRRRAKGRK+LCTK+NPSSGK A
Subjt:  KAALCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA

Q04CX6 50S ribosomal protein L348.6e-0470.59Show/hide
Query:  RKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVL
        ++ L R HGFR+RM T NGR VL RRRAKGRKVL
Subjt:  RKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVL

Q1I2H1 50S ribosomal protein L348.6e-0483.33Show/hide
Query:  ARTHGFRRRMRTTNGRAVLKRRRAKGRKVL
        ARTHGFR RM T NGRAVL RRRAKGRK L
Subjt:  ARTHGFRRRMRTTNGRAVLKRRRAKGRKVL

Q48BE9 50S ribosomal protein L348.6e-0483.33Show/hide
Query:  ARTHGFRRRMRTTNGRAVLKRRRAKGRKVL
        ARTHGFR RM T NGRAVL RRRAKGRK L
Subjt:  ARTHGFRRRMRTTNGRAVLKRRRAKGRKVL

Q9LP37 50S ribosomal protein L34, chloroplastic7.5e-3263.64Show/hide
Query:  AAISVLSSPWVSTGGMAARVPSASLVISTGSRSCSVSLNTANNTFARSGLLHCSFLPSSSISCASSFSGLSLGLDWSSKIEVGQG-KGRSLVVRAGKAAL
        +A S L +P  S G +   VPSASL + TG R  S SL ++    A S LLHCSFL SS +S AS FSGLS+  D SS+     G + R LVVRAGKAAL
Subjt:  AAISVLSSPWVSTGGMAARVPSASLVISTGSRSCSVSLNTANNTFARSGLLHCSFLPSSSISCASSFSGLSLGLDWSSKIEVGQG-KGRSLVVRAGKAAL

Query:  CQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA
        CQTKR+RSRKSLARTHGFRRRMRTT+GRA +KRRRAKGR  LC KSNPSSGK A
Subjt:  CQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA

Arabidopsis top hitse value%identityAlignment
AT1G29070.1 Ribosomal protein L345.3e-3363.64Show/hide
Query:  AAISVLSSPWVSTGGMAARVPSASLVISTGSRSCSVSLNTANNTFARSGLLHCSFLPSSSISCASSFSGLSLGLDWSSKIEVGQG-KGRSLVVRAGKAAL
        +A S L +P  S G +   VPSASL + TG R  S SL ++    A S LLHCSFL SS +S AS FSGLS+  D SS+     G + R LVVRAGKAAL
Subjt:  AAISVLSSPWVSTGGMAARVPSASLVISTGSRSCSVSLNTANNTFARSGLLHCSFLPSSSISCASSFSGLSLGLDWSSKIEVGQG-KGRSLVVRAGKAAL

Query:  CQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA
        CQTKR+RSRKSLARTHGFRRRMRTT+GRA +KRRRAKGR  LC KSNPSSGK A
Subjt:  CQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCGATATCAGTATTATCGTCCCCATGGGTTTCGACCGGAGGCATGGCCGCGCGCGTTCCTTCAGCTTCTCTTGTAATCTCCACTGGCTCTAGAAGTTGCTCCGT
ATCTCTTAATACCGCAAACAACACTTTCGCTCGTTCTGGACTGCTTCATTGTTCGTTTCTTCCTTCTTCCTCTATTTCGTGTGCTTCATCTTTCTCAGGTTTATCTTTGG
GTTTGGATTGGAGCTCTAAAATTGAAGTTGGACAAGGGAAGGGCCGGAGCTTAGTGGTTAGGGCTGGCAAGGCTGCACTTTGTCAGACTAAAAGAAACAGGTCGCGTAAA
TCCTTAGCTCGGACTCATGGTTTTCGCCGACGAATGCGAACTACCAATGGAAGAGCTGTTTTAAAGCGCAGACGTGCCAAGGGTAGGAAGGTCCTCTGCACAAAGTCCAA
TCCAAGCAGCGGAAAGGGTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCGATATCAGTATTATCGTCCCCATGGGTTTCGACCGGAGGCATGGCCGCGCGCGTTCCTTCAGCTTCTCTTGTAATCTCCACTGGCTCTAGAAGTTGCTCCGT
ATCTCTTAATACCGCAAACAACACTTTCGCTCGTTCTGGACTGCTTCATTGTTCGTTTCTTCCTTCTTCCTCTATTTCGTGTGCTTCATCTTTCTCAGGTTTATCTTTGG
GTTTGGATTGGAGCTCTAAAATTGAAGTTGGACAAGGGAAGGGCCGGAGCTTAGTGGTTAGGGCTGGCAAGGCTGCACTTTGTCAGACTAAAAGAAACAGGTCGCGTAAA
TCCTTAGCTCGGACTCATGGTTTTCGCCGACGAATGCGAACTACCAATGGAAGAGCTGTTTTAAAGCGCAGACGTGCCAAGGGTAGGAAGGTCCTCTGCACAAAGTCCAA
TCCAAGCAGCGGAAAGGGTGCTTAA
Protein sequenceShow/hide protein sequence
MAAISVLSSPWVSTGGMAARVPSASLVISTGSRSCSVSLNTANNTFARSGLLHCSFLPSSSISCASSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAALCQTKRNRSRK
SLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA