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Lag0013905 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0013905
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr1:53599673..53603207
RNA-Seq ExpressionLag0013905
SyntenyLag0013905
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU48256.1 hypothetical protein TSUD_174940 [Trifolium subterraneum]5.2e-0438.2Show/hide
Query:  DMLIFVTALWTIWNNRNHAVFQDNTNPIRLAVDPIVWASKYTFEYVEAQSGSCSGHTKSPTTSNDGNGSSISWSPPPSNQYKLNVDAAL
        DM I  T  + +W  RN+ VFQ    P   AV+  +        ++ A+      H  S    N   G++ISWSPPPSN  KLNVDA L
Subjt:  DMLIFVTALWTIWNNRNHAVFQDNTNPIRLAVDPIVWASKYTFEYVEAQSGSCSGHTKSPTTSNDGNGSSISWSPPPSNQYKLNVDAAL
XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]2.5e-0632.99Show/hide
Query:  AQEFLSTTDMLIFVTALWTIWNNRNHAVFQDNTNPI-RLAVDPIVWASKYTFEYVEAQSGSCSGHTKSPTTSNDGNGSSISWSPPPSNQYKLNVDAA
        + E LS  D       +W +WN RN   F D+T  + ++ ++ + WA+KY  E+ EA+S        +P T    N + I W PP    YK+N DA+
Subjt:  AQEFLSTTDMLIFVTALWTIWNNRNHAVFQDNTNPI-RLAVDPIVWASKYTFEYVEAQSGSCSGHTKSPTTSNDGNGSSISWSPPPSNQYKLNVDAA
XP_025678865.1 uncharacterized protein LOC112778794 [Arachis hypogaea]8.8e-0434.74Show/hide
Query:  FVTALWTIWNNRNHAVFQDNTNPIRLAVDPIVWASKY-TFEYVEAQSGSCSGHTKSPTTSNDGNGSSISWSPPPSNQYKLNVDAALKMEIWDLAL
        FV   W IW  RN  +FQ       ++   ++  SKY T E+ +A  GS + +   P T   G    I+W PPP N+ K+N DAA   +    AL
Subjt:  FVTALWTIWNNRNHAVFQDNTNPIRLAVDPIVWASKY-TFEYVEAQSGSCSGHTKSPTTSNDGNGSSISWSPPPSNQYKLNVDAALKMEIWDLAL
TrEMBL top hitse value%identityAlignment
A0A2Z6NXT3 RNase H domain-containing protein2.5e-0438.2Show/hide
Query:  DMLIFVTALWTIWNNRNHAVFQDNTNPIRLAVDPIVWASKYTFEYVEAQSGSCSGHTKSPTTSNDGNGSSISWSPPPSNQYKLNVDAAL
        DM I  T  + +W  RN+ VFQ    P   AV+  +        ++ A+      H  S    N   G++ISWSPPPSN  KLNVDA L
Subjt:  DMLIFVTALWTIWNNRNHAVFQDNTNPIRLAVDPIVWASKYTFEYVEAQSGSCSGHTKSPTTSNDGNGSSISWSPPPSNQYKLNVDAAL
A0A6J1DAR4 uncharacterized protein LOC1110189541.2e-0632.99Show/hide
Query:  AQEFLSTTDMLIFVTALWTIWNNRNHAVFQDNTNPI-RLAVDPIVWASKYTFEYVEAQSGSCSGHTKSPTTSNDGNGSSISWSPPPSNQYKLNVDAA
        + E LS  D       +W +WN RN   F D+T  + ++ ++ + WA+KY  E+ EA+S        +P T    N + I W PP    YK+N DA+
Subjt:  AQEFLSTTDMLIFVTALWTIWNNRNHAVFQDNTNPI-RLAVDPIVWASKYTFEYVEAQSGSCSGHTKSPTTSNDGNGSSISWSPPPSNQYKLNVDAA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGATGGACAGGGATGTTGTTCCTGATCAATGGAGTTCAGAGGTGTTTCTCTCTACTGACGGGGTGGTTGAACTTTGTACTCATTGTCCGACAAGAGGTTCTCAATG
GAGTTCAGAGGTGTTTCTCTCTACTGACGGGGTGGTTGAACTTTGTACTCATTGTCCGACAAGGGCCCAGGAATTCTTGTCCACGACAGACATGTTGATCTTTGTCACTG
CATTATGGACCATATGGAATAACCGGAACCATGCAGTTTTCCAGGACAACACAAATCCAATCAGATTGGCAGTTGACCCCATTGTTTGGGCTTCGAAATACACTTTTGAA
TACGTGGAGGCTCAATCAGGCAGCTGTTCAGGACACACGAAATCTCCCACTACGTCGAATGATGGAAATGGTTCATCTATCTCTTGGTCTCCACCACCCTCCAATCAATA
CAAACTGAATGTGGATGCAGCACTAAAAATGGAGATATGGGATCTGGCATTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGATGGACAGGGATGTTGTTCCTGATCAATGGAGTTCAGAGGTGTTTCTCTCTACTGACGGGGTGGTTGAACTTTGTACTCATTGTCCGACAAGAGGTTCTCAATG
GAGTTCAGAGGTGTTTCTCTCTACTGACGGGGTGGTTGAACTTTGTACTCATTGTCCGACAAGGGCCCAGGAATTCTTGTCCACGACAGACATGTTGATCTTTGTCACTG
CATTATGGACCATATGGAATAACCGGAACCATGCAGTTTTCCAGGACAACACAAATCCAATCAGATTGGCAGTTGACCCCATTGTTTGGGCTTCGAAATACACTTTTGAA
TACGTGGAGGCTCAATCAGGCAGCTGTTCAGGACACACGAAATCTCCCACTACGTCGAATGATGGAAATGGTTCATCTATCTCTTGGTCTCCACCACCCTCCAATCAATA
CAAACTGAATGTGGATGCAGCACTAAAAATGGAGATATGGGATCTGGCATTATAA
Protein sequenceShow/hide protein sequence
MQMDRDVVPDQWSSEVFLSTDGVVELCTHCPTRGSQWSSEVFLSTDGVVELCTHCPTRAQEFLSTTDMLIFVTALWTIWNNRNHAVFQDNTNPIRLAVDPIVWASKYTFE
YVEAQSGSCSGHTKSPTTSNDGNGSSISWSPPPSNQYKLNVDAALKMEIWDLAL