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Lag0013922 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0013922
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionBEST Arabidopsis thaliana protein match is: transcription regulators .
Genome locationchr1:53754122..53754880
RNA-Seq ExpressionLag0013922
SyntenyLag0013922
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034655.1 hypothetical protein SDJN02_04385, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-3858.38Show/hide
Query:  MVSALQKSFASRKKLRLVRSLATHES-------------------------------------------------PEVKVEKIGEEFRVKVRCEKGGERL
        MVS  QK F SRKKLRLVRSL T++S                                                  EVKVEK+GEE RVKVRCEKGG+RL
Subjt:  MVSALQKSFASRKKLRLVRSLATHES-------------------------------------------------PEVKVEKIGEEFRVKVRCEKGGERL

Query:  VSVLEAFDKMGLNVLQAKVSCTECFSMEAIAVAEDDQSLNVRDITEAINVAIDAKLLAANQHQKDIPEKDAEI
        V+VLEAFDKMGLNVLQAKVSC+ECFSMEAIAVAED+QSLN+ DITEAIN AID K LAANQ QK+ PEKD EI
Subjt:  VSVLEAFDKMGLNVLQAKVSCTECFSMEAIAVAEDDQSLNVRDITEAINVAIDAKLLAANQHQKDIPEKDAEI

XP_022925942.1 uncharacterized protein LOC111433204 [Cucurbita moschata]7.0e-3857.8Show/hide
Query:  MVSALQKSFASRKKLRLVRSLATHES-------------------------------------------------PEVKVEKIGEEFRVKVRCEKGGERL
        MVS  QK F SRKKLRLVRSL T++S                                                  EVKVEK+GEE RVKVRCEKGG+RL
Subjt:  MVSALQKSFASRKKLRLVRSLATHES-------------------------------------------------PEVKVEKIGEEFRVKVRCEKGGERL

Query:  VSVLEAFDKMGLNVLQAKVSCTECFSMEAIAVAEDDQSLNVRDITEAINVAIDAKLLAANQHQKDIPEKDAEI
        V+VLEAFDKMGLNVLQAKVSC+ECFSMEAIAVAED+QSLN+ DITEAIN AID K LAANQ QK+ P+KD EI
Subjt:  VSVLEAFDKMGLNVLQAKVSCTECFSMEAIAVAEDDQSLNVRDITEAINVAIDAKLLAANQHQKDIPEKDAEI

XP_022978770.1 uncharacterized protein LOC111478631 [Cucurbita maxima]8.3e-3958.96Show/hide
Query:  MVSALQKSFASRKKLRLVRSLATHES-------------------------------------------------PEVKVEKIGEEFRVKVRCEKGGERL
        MVS  QK F SRKKLRLVRSL T++S                                                  EVKVEK+GEEFRVKVRCEKGG+RL
Subjt:  MVSALQKSFASRKKLRLVRSLATHES-------------------------------------------------PEVKVEKIGEEFRVKVRCEKGGERL

Query:  VSVLEAFDKMGLNVLQAKVSCTECFSMEAIAVAEDDQSLNVRDITEAINVAIDAKLLAANQHQKDIPEKDAEI
        V+VLEAFDKMGLNVLQAKVSC+ECFSMEAIAVAED+QSLN+ DITEAIN AID K LAANQ QK+ PEKD EI
Subjt:  VSVLEAFDKMGLNVLQAKVSCTECFSMEAIAVAEDDQSLNVRDITEAINVAIDAKLLAANQHQKDIPEKDAEI

XP_023544520.1 uncharacterized protein LOC111804071 [Cucurbita pepo subsp. pepo]1.4e-3858.38Show/hide
Query:  MVSALQKSFASRKKLRLVRSLATHES-------------------------------------------------PEVKVEKIGEEFRVKVRCEKGGERL
        MVS  QK F SRKKLRLVRSL T++S                                                  EVKVEK+GEEFRVKVRCEKGG+RL
Subjt:  MVSALQKSFASRKKLRLVRSLATHES-------------------------------------------------PEVKVEKIGEEFRVKVRCEKGGERL

Query:  VSVLEAFDKMGLNVLQAKVSCTECFSMEAIAVAEDDQSLNVRDITEAINVAIDAKLLAANQHQKDIPEKDAEI
        V+VLEAFDKMGLNVLQAKVSC+ECFSMEAIAVAED+QSLN+ DITEAIN AI+ K LAANQ QK+ PEKD EI
Subjt:  VSVLEAFDKMGLNVLQAKVSCTECFSMEAIAVAEDDQSLNVRDITEAINVAIDAKLLAANQHQKDIPEKDAEI

XP_038893157.1 uncharacterized protein LOC120082020 [Benincasa hispida]9.2e-3858.38Show/hide
Query:  MVSALQKSFASRKKLRLVRSLATHES-------------------------------------------------PEVKVEKIGEEFRVKVRCEKGGERL
        MVS LQK F SR KLRLVRSLAT+ES                                                  EVKVEK GEEF+VKVRCEKGG+RL
Subjt:  MVSALQKSFASRKKLRLVRSLATHES-------------------------------------------------PEVKVEKIGEEFRVKVRCEKGGERL

Query:  VSVLEAFDKMGLNVLQAKVSCTECFSMEAIAVAEDDQSLNVRDITEAINVAIDAKLLAANQHQKDIPEKDAEI
        VSVLEAF+KMGLNV++A+VSCTECF MEAIAVAE+ + LNV DITEAINVAID KLLA NQH KDIPE DAEI
Subjt:  VSVLEAFDKMGLNVLQAKVSCTECFSMEAIAVAEDDQSLNVRDITEAINVAIDAKLLAANQHQKDIPEKDAEI

TrEMBL top hitse value%identityAlignment
A0A5A7UBN8 Uncharacterized protein6.0e-3555.75Show/hide
Query:  MVSALQKSFASRKKLRLVRSLAT-------------------------------------------------HESPEVKVEKIGEEFRVKVRCEKGGERL
        MVS LQK F SR KLRLVRSL T                                                 H S EVKVEK GEEFRVKVRCEKGG+RL
Subjt:  MVSALQKSFASRKKLRLVRSLAT-------------------------------------------------HESPEVKVEKIGEEFRVKVRCEKGGERL

Query:  VSVLEAFDKMGLNVLQAKVSCTECFSMEAIAVAED-DQSLNVRDITEAINVAIDAKLLAANQHQKDIPEKDAEI
        VSVLEAF+KMGLNV++A+VSCTECF MEAIAVAED  Q LN+ DIT+AINVAID KLLA NQH  DIP  DA++
Subjt:  VSVLEAFDKMGLNVLQAKVSCTECFSMEAIAVAED-DQSLNVRDITEAINVAIDAKLLAANQHQKDIPEKDAEI

A0A6J1CKK9 uncharacterized protein LOC1110123031.3e-3756.32Show/hide
Query:  MVSALQKSFASRKKLRLVRSLATHESP--------------------------------------------------EVKVEKIGEEFRVKVRCEKGGER
        MVS LQ+ FASR+KLRLVR LA HESP                                                  EV+VEKIG+EFRV++RCEKGG+R
Subjt:  MVSALQKSFASRKKLRLVRSLATHESP--------------------------------------------------EVKVEKIGEEFRVKVRCEKGGER

Query:  LVSVLEAFDKMGLNVLQAKVSCTECFSMEAIAVAEDDQSLNVRDITEAINVAIDAKLLAANQHQKDIPEKDAEI
        LVSVLEAFDKMGLNVL+A+VSCT+CFSMEA+AVAE +QSL+VRDI EAINVAID KLLAANQ Q++IPE++ EI
Subjt:  LVSVLEAFDKMGLNVLQAKVSCTECFSMEAIAVAEDDQSLNVRDITEAINVAIDAKLLAANQHQKDIPEKDAEI

A0A6J1ED01 uncharacterized protein LOC1114332043.4e-3857.8Show/hide
Query:  MVSALQKSFASRKKLRLVRSLATHES-------------------------------------------------PEVKVEKIGEEFRVKVRCEKGGERL
        MVS  QK F SRKKLRLVRSL T++S                                                  EVKVEK+GEE RVKVRCEKGG+RL
Subjt:  MVSALQKSFASRKKLRLVRSLATHES-------------------------------------------------PEVKVEKIGEEFRVKVRCEKGGERL

Query:  VSVLEAFDKMGLNVLQAKVSCTECFSMEAIAVAEDDQSLNVRDITEAINVAIDAKLLAANQHQKDIPEKDAEI
        V+VLEAFDKMGLNVLQAKVSC+ECFSMEAIAVAED+QSLN+ DITEAIN AID K LAANQ QK+ P+KD EI
Subjt:  VSVLEAFDKMGLNVLQAKVSCTECFSMEAIAVAEDDQSLNVRDITEAINVAIDAKLLAANQHQKDIPEKDAEI

A0A6J1IR65 uncharacterized protein LOC1114786314.0e-3958.96Show/hide
Query:  MVSALQKSFASRKKLRLVRSLATHES-------------------------------------------------PEVKVEKIGEEFRVKVRCEKGGERL
        MVS  QK F SRKKLRLVRSL T++S                                                  EVKVEK+GEEFRVKVRCEKGG+RL
Subjt:  MVSALQKSFASRKKLRLVRSLATHES-------------------------------------------------PEVKVEKIGEEFRVKVRCEKGGERL

Query:  VSVLEAFDKMGLNVLQAKVSCTECFSMEAIAVAEDDQSLNVRDITEAINVAIDAKLLAANQHQKDIPEKDAEI
        V+VLEAFDKMGLNVLQAKVSC+ECFSMEAIAVAED+QSLN+ DITEAIN AID K LAANQ QK+ PEKD EI
Subjt:  VSVLEAFDKMGLNVLQAKVSCTECFSMEAIAVAEDDQSLNVRDITEAINVAIDAKLLAANQHQKDIPEKDAEI

E5GC31 Uncharacterized protein6.0e-3555.75Show/hide
Query:  MVSALQKSFASRKKLRLVRSLAT-------------------------------------------------HESPEVKVEKIGEEFRVKVRCEKGGERL
        MVS LQK F SR KLRLVRSL T                                                 H S EVKVEK GEEFRVKVRCEKGG+RL
Subjt:  MVSALQKSFASRKKLRLVRSLAT-------------------------------------------------HESPEVKVEKIGEEFRVKVRCEKGGERL

Query:  VSVLEAFDKMGLNVLQAKVSCTECFSMEAIAVAED-DQSLNVRDITEAINVAIDAKLLAANQHQKDIPEKDAEI
        VSVLEAF+KMGLNV++A+VSCTECF MEAIAVAED  Q LN+ DIT+AINVAID KLLA NQH  DIP  DA++
Subjt:  VSVLEAFDKMGLNVLQAKVSCTECFSMEAIAVAED-DQSLNVRDITEAINVAIDAKLLAANQHQKDIPEKDAEI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G29270.1 unknown protein1.1e-1541.75Show/hide
Query:  VSALQKSFASRKKLRLVRSLATHESPEVKVEKIGEEFRVKVRCEKGGERLVSVLEAFDKMGLNVLQAKVSCTECFSMEAIAVAED-DQSLNVRDITEAIN
        + ALQ+ +   + L++ +  + H+  EVKVEKIGE F+VK++  +G   LV++LEAF++MGLNV QA+ SC + F+MEAI   +  D+  +V D+T+ + 
Subjt:  VSALQKSFASRKKLRLVRSLATHESPEVKVEKIGEEFRVKVRCEKGGERLVSVLEAFDKMGLNVLQAKVSCTECFSMEAIAVAED-DQSLNVRDITEAIN

Query:  VAI
         A+
Subjt:  VAI

AT2G40435.1 BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1)8.1e-0839.51Show/hide
Query:  ESPEVKVEKIGEEFRVKVRCEKGGE-RLVSVLEAFDKMGLNVLQAKVSCTECFSMEAIAVA-EDDQSLNVRDITEAINVAI
        ++P V VE + + F + V   K     LVSVLEAF+ +GLNVL+A+ SCT+ FS+ A+ +  ED ++++   + +A+  AI
Subjt:  ESPEVKVEKIGEEFRVKVRCEKGGE-RLVSVLEAFDKMGLNVLQAKVSCTECFSMEAIAVA-EDDQSLNVRDITEAINVAI

AT3G56220.1 transcription regulators9.0e-0737.04Show/hide
Query:  SPEVKVEKIGEEFRVKVRCEKG-GERLVSVLEAFDKMGLNVLQAKVSCTECFSMEAIAVAEDDQS--LNVRDITEAINVAI
        +P V VE + + F +KV   K     LV VLE F+ +GL+V++A+VSCT+ FS+ AI  + +D    ++   + +A+  AI
Subjt:  SPEVKVEKIGEEFRVKVRCEKG-GERLVSVLEAFDKMGLNVLQAKVSCTECFSMEAIAVAEDDQS--LNVRDITEAINVAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCTGCATTACAAAAGAGTTTCGCCTCACGCAAGAAGCTACGCCTTGTTCGATCACTGGCCACCCATGAATCTCCTGAAGTGAAGGTAGAGAAGATTGGAGAAGA
GTTTAGAGTGAAAGTGAGATGCGAAAAGGGAGGGGAGAGATTGGTTTCAGTACTAGAAGCATTTGACAAAATGGGTCTTAATGTTCTGCAAGCTAAAGTTTCATGTACCG
AATGTTTTTCCATGGAAGCCATTGCTGTAGCTGAAGATGATCAATCACTTAATGTAAGAGATATAACTGAAGCTATTAATGTAGCCATTGATGCGAAATTATTAGCTGCA
AATCAGCATCAGAAAGATATTCCTGAGAAAGATGCTGAAATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTTCTGCATTACAAAAGAGTTTCGCCTCACGCAAGAAGCTACGCCTTGTTCGATCACTGGCCACCCATGAATCTCCTGAAGTGAAGGTAGAGAAGATTGGAGAAGA
GTTTAGAGTGAAAGTGAGATGCGAAAAGGGAGGGGAGAGATTGGTTTCAGTACTAGAAGCATTTGACAAAATGGGTCTTAATGTTCTGCAAGCTAAAGTTTCATGTACCG
AATGTTTTTCCATGGAAGCCATTGCTGTAGCTGAAGATGATCAATCACTTAATGTAAGAGATATAACTGAAGCTATTAATGTAGCCATTGATGCGAAATTATTAGCTGCA
AATCAGCATCAGAAAGATATTCCTGAGAAAGATGCTGAAATTTAG
Protein sequenceShow/hide protein sequence
MVSALQKSFASRKKLRLVRSLATHESPEVKVEKIGEEFRVKVRCEKGGERLVSVLEAFDKMGLNVLQAKVSCTECFSMEAIAVAEDDQSLNVRDITEAINVAIDAKLLAA
NQHQKDIPEKDAEI