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Lag0013971 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0013971
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr1:54106560..54107492
RNA-Seq ExpressionLag0013971
SyntenyLag0013971
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594503.1 hypothetical protein SDJN03_11056, partial [Cucurbita argyrosperma subsp. sororia]5.5e-3941.39Show/hide
Query:  IEPTQEHEKEQEEDPHEDDSNNLDDD--DRGKIEQNVQQFTRSSKEMVKIALYELYTDEKKLLKELLQLWNRSNLAAYEDPTKEEREKKMKEGRVVIKDQ
        +    EHE+EQE    ++D NN++++  D G+I QN +   RS+ E   IA+  LY  +KK LK +LQLWNRS+L   EDP  +E E++ KEGR++IKD 
Subjt:  IEPTQEHEKEQEEDPHEDDSNNLDDD--DRGKIEQNVQQFTRSSKEMVKIALYELYTDEKKLLKELLQLWNRSNLAAYEDPTKEEREKKMKEGRVVIKDQ

Query:  DEDEDGSKKHKIEKSSELEVSSSSSRKGKEKMESDEPENVIDVVRLIGDIILEFVAWILHISEMARGRLKTEGIWTAHLETGVGVIRSLNGMLEILNLDM
        ++D    +K + +++  L    S+SRKGKEK+   EPE + D + L+  I L F  +I H+ EMA  R +    W + LE G  ++  +   ++I+N +M
Subjt:  DEDEDGSKKHKIEKSSELEVSSSSSRKGKEKMESDEPENVIDVVRLIGDIILEFVAWILHISEMARGRLKTEGIWTAHLETGVGVIRSLNGMLEILNLDM

Query:  EMMRKKKK-KEEFVKIHQVLSQLEEVNAVLDGSPNIGIVSERDCTELEIAMCDRELKMCKNTLTELMTRILKM
          +R++K  +EE+VK H +L+QL+E++  ++ SPNIGIVSE+DCT+LE+ +C+ ELK CKN   EL++ +LK+
Subjt:  EMMRKKKK-KEEFVKIHQVLSQLEEVNAVLDGSPNIGIVSERDCTELEIAMCDRELKMCKNTLTELMTRILKM

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGACAGAGAAGAGAACGTTGAAGAAGAAGTTTCGAACGCAACAATTGAAAAGGAAACCGACGACCTTCGTTTCAGCGAATCGGTAATTGAACCAACGCAAGAACA
CGAGAAAGAACAAGAAGAAGATCCGCACGAGGATGATTCGAATAACCTCGATGATGACGATCGCGGAAAGATCGAACAAAACGTGCAACAATTCACGAGGTCGAGTAAAG
AAATGGTAAAGATCGCGTTATACGAGTTATACACTGACGAGAAAAAACTGCTGAAGGAGCTGCTCCAGTTATGGAATCGCTCAAATCTGGCCGCGTACGAAGATCCGACG
AAAGAGGAAAGAGAAAAGAAAATGAAAGAAGGCCGTGTAGTGATCAAGGATCAGGACGAGGACGAGGACGGCTCGAAGAAGCATAAAATTGAAAAAAGCTCTGAATTGGA
AGTTTCGAGTAGCAGTTCAAGAAAAGGAAAAGAGAAAATGGAATCGGACGAACCTGAAAACGTTATCGATGTGGTGAGATTAATCGGCGACATTATACTGGAATTCGTTG
CGTGGATTCTGCATATAAGTGAGATGGCGAGAGGGAGACTGAAAACCGAAGGGATCTGGACGGCTCATTTGGAGACTGGCGTGGGAGTGATACGGAGTTTGAATGGAATG
CTGGAGATATTGAATTTGGACATGGAAATGATGAGGAAGAAGAAGAAGAAAGAGGAATTTGTGAAGATTCATCAAGTTTTGAGCCAACTGGAGGAGGTTAATGCGGTTTT
GGATGGCTCTCCCAACATTGGGATTGTTTCTGAGAGGGACTGTACGGAACTGGAAATAGCCATGTGTGATCGTGAGCTCAAAATGTGCAAGAACACTTTGACTGAGTTGA
TGACCAGGATTTTGAAAATGCAAAGCGGCCGATTTTCTCAGAGATTAGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGACAGACAGAGAAGAGAACGTTGAAGAAGAAGTTTCGAACGCAACAATTGAAAAGGAAACCGACGACCTTCGTTTCAGCGAATCGGTAATTGAACCAACGCAAGAACA
CGAGAAAGAACAAGAAGAAGATCCGCACGAGGATGATTCGAATAACCTCGATGATGACGATCGCGGAAAGATCGAACAAAACGTGCAACAATTCACGAGGTCGAGTAAAG
AAATGGTAAAGATCGCGTTATACGAGTTATACACTGACGAGAAAAAACTGCTGAAGGAGCTGCTCCAGTTATGGAATCGCTCAAATCTGGCCGCGTACGAAGATCCGACG
AAAGAGGAAAGAGAAAAGAAAATGAAAGAAGGCCGTGTAGTGATCAAGGATCAGGACGAGGACGAGGACGGCTCGAAGAAGCATAAAATTGAAAAAAGCTCTGAATTGGA
AGTTTCGAGTAGCAGTTCAAGAAAAGGAAAAGAGAAAATGGAATCGGACGAACCTGAAAACGTTATCGATGTGGTGAGATTAATCGGCGACATTATACTGGAATTCGTTG
CGTGGATTCTGCATATAAGTGAGATGGCGAGAGGGAGACTGAAAACCGAAGGGATCTGGACGGCTCATTTGGAGACTGGCGTGGGAGTGATACGGAGTTTGAATGGAATG
CTGGAGATATTGAATTTGGACATGGAAATGATGAGGAAGAAGAAGAAGAAAGAGGAATTTGTGAAGATTCATCAAGTTTTGAGCCAACTGGAGGAGGTTAATGCGGTTTT
GGATGGCTCTCCCAACATTGGGATTGTTTCTGAGAGGGACTGTACGGAACTGGAAATAGCCATGTGTGATCGTGAGCTCAAAATGTGCAAGAACACTTTGACTGAGTTGA
TGACCAGGATTTTGAAAATGCAAAGCGGCCGATTTTCTCAGAGATTAGATTAG
Protein sequenceShow/hide protein sequence
MTDREENVEEEVSNATIEKETDDLRFSESVIEPTQEHEKEQEEDPHEDDSNNLDDDDRGKIEQNVQQFTRSSKEMVKIALYELYTDEKKLLKELLQLWNRSNLAAYEDPT
KEEREKKMKEGRVVIKDQDEDEDGSKKHKIEKSSELEVSSSSSRKGKEKMESDEPENVIDVVRLIGDIILEFVAWILHISEMARGRLKTEGIWTAHLETGVGVIRSLNGM
LEILNLDMEMMRKKKKKEEFVKIHQVLSQLEEVNAVLDGSPNIGIVSERDCTELEIAMCDRELKMCKNTLTELMTRILKMQSGRFSQRLD