; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0013996 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0013996
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionhigh mobility group B protein 14
Genome locationchr1:54300412..54302506
RNA-Seq ExpressionLag0013996
SyntenyLag0013996
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR009071 - High mobility group box domain
IPR036910 - High mobility group box domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581419.1 High mobility group B protein 14, partial [Cucurbita argyrosperma subsp. sororia]1.1e-5887.5Show/hide
Query:  FVEAFRD-TGLSVKRSEEMKRSARASRF-NTEKRVKTTKKPKTKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMT
        F EA ++ TGL VKRSEEMKRSA+  RF NTEK  KT K+PK+ QKKKNDKFD NKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMT
Subjt:  FVEAFRD-TGLSVKRSEEMKRSARASRF-NTEKRVKTTKKPKTKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMT

Query:  YEEKVQYYDIATEKRAEFDRAMAEYKKRKESGVDQESEEDWEID
        YEEKVQYYDIATEKRAEFD+AMAEYKKRKESGVDQESEEDWEID
Subjt:  YEEKVQYYDIATEKRAEFDRAMAEYKKRKESGVDQESEEDWEID

XP_004134634.1 high mobility group B protein 14 [Cucumis sativus]1.9e-5886.86Show/hide
Query:  DTGLSVKRSEEMKRSARASRFNTEKRVKTTKKPKTKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYY
        +TGL VKRSE MK +A+ASRFNT+KR KT KKP +KQKKKNDKFD NKPKKPPTAFFYFLDDFRKEFQEQNPDVK+MRDVGKACGEKWKTMTYEEKVQYY
Subjt:  DTGLSVKRSEEMKRSARASRFNTEKRVKTTKKPKTKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYY

Query:  DIATEKRAEFDRAMAEYKKRKESGVDQESEEDWEIDG
        DIATEKRAEFD+AM EYKKR ESG+DQESEEDW IDG
Subjt:  DIATEKRAEFDRAMAEYKKRKESGVDQESEEDWEIDG

XP_022926030.1 high mobility group B protein 14 [Cucurbita moschata]3.0e-5990.51Show/hide
Query:  DTGLSVKRSEEMKRSARASRF-NTEKRVKTTKKPKTKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQY
        DTGL VKRSEEMKRSA+  RF NTEK  KT K+PK+ QKKKNDKFD NKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQY
Subjt:  DTGLSVKRSEEMKRSARASRF-NTEKRVKTTKKPKTKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQY

Query:  YDIATEKRAEFDRAMAEYKKRKESGVDQESEEDWEID
        YDIATEKRAEFD+AMAEYKKRKESGVDQESEEDWEID
Subjt:  YDIATEKRAEFDRAMAEYKKRKESGVDQESEEDWEID

XP_023544425.1 high mobility group B protein 14 [Cucurbita pepo subsp. pepo]5.1e-5990.51Show/hide
Query:  DTGLSVKRSEEMKRSARASRFN-TEKRVKTTKKPKTKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQY
        DTGL VKRSEEMKRSA+A RFN TEK  KT K+PK+ QKKKNDK D NKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQY
Subjt:  DTGLSVKRSEEMKRSARASRFN-TEKRVKTTKKPKTKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQY

Query:  YDIATEKRAEFDRAMAEYKKRKESGVDQESEEDWEID
        YDIATEKRAEFD+AMAEYKKRKESGVDQESEEDWEID
Subjt:  YDIATEKRAEFDRAMAEYKKRKESGVDQESEEDWEID

XP_038881049.1 high mobility group B protein 14 isoform X1 [Benincasa hispida]4.6e-6090.51Show/hide
Query:  DTGLSVKRSEEMKRSARASRFNTE-KRVKTTKKPKTKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQY
        DTGL VKRSEEMKR+A+ASRFNT+ KR KT KKPK+KQKKKNDKFD NKPKKPPTAFFYFLDDFRKEFQEQNPDVK+MRDVGKACGEKWKTMTYEEKVQY
Subjt:  DTGLSVKRSEEMKRSARASRFNTE-KRVKTTKKPKTKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQY

Query:  YDIATEKRAEFDRAMAEYKKRKESGVDQESEEDWEID
        YDIAT+KRAEFD+AMAEYKKRKESG+DQESEEDWEID
Subjt:  YDIATEKRAEFDRAMAEYKKRKESGVDQESEEDWEID

TrEMBL top hitse value%identityAlignment
A0A0A0KKL8 HMG box domain-containing protein9.4e-5986.86Show/hide
Query:  DTGLSVKRSEEMKRSARASRFNTEKRVKTTKKPKTKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYY
        +TGL VKRSE MK +A+ASRFNT+KR KT KKP +KQKKKNDKFD NKPKKPPTAFFYFLDDFRKEFQEQNPDVK+MRDVGKACGEKWKTMTYEEKVQYY
Subjt:  DTGLSVKRSEEMKRSARASRFNTEKRVKTTKKPKTKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYY

Query:  DIATEKRAEFDRAMAEYKKRKESGVDQESEEDWEIDG
        DIATEKRAEFD+AM EYKKR ESG+DQESEEDW IDG
Subjt:  DIATEKRAEFDRAMAEYKKRKESGVDQESEEDWEIDG

A0A1S3AZW3 high mobility group B protein 148.8e-5786.13Show/hide
Query:  TGLSVKRSEEMKRSARASRFNTE-KRVKTTKKPKTKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYY
        TGL VKR +EMK +A+ASRFNT+ KR KT KKPK+KQKKKND+FD NKPKKPPTAFFYFLDDFRKEFQEQNPDVK+MRDVGKACGEKWKTMTYEEKVQYY
Subjt:  TGLSVKRSEEMKRSARASRFNTE-KRVKTTKKPKTKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYY

Query:  DIATEKRAEFDRAMAEYKKRKESGVDQESEEDWEIDG
        DIATEKRAEFD+AM EYKKR ESG+ QESEEDWEIDG
Subjt:  DIATEKRAEFDRAMAEYKKRKESGVDQESEEDWEIDG

A0A6J1CXW3 high mobility group B protein 14 isoform X11.4e-5792.06Show/hide
Query:  MKRSARASRFNTEKRVKTTKKPKTKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFD
        MKRSARASRFN++KR KT K+PK+K+KKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFD
Subjt:  MKRSARASRFNTEKRVKTTKKPKTKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFD

Query:  RAMAEYKKRKESGVDQESEEDWEIDG
        +AMAEYKKRKESG+D+ESEEDWEIDG
Subjt:  RAMAEYKKRKESGVDQESEEDWEIDG

A0A6J1EJV4 high mobility group B protein 141.4e-5990.51Show/hide
Query:  DTGLSVKRSEEMKRSARASRF-NTEKRVKTTKKPKTKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQY
        DTGL VKRSEEMKRSA+  RF NTEK  KT K+PK+ QKKKNDKFD NKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQY
Subjt:  DTGLSVKRSEEMKRSARASRF-NTEKRVKTTKKPKTKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQY

Query:  YDIATEKRAEFDRAMAEYKKRKESGVDQESEEDWEID
        YDIATEKRAEFD+AMAEYKKRKESGVDQESEEDWEID
Subjt:  YDIATEKRAEFDRAMAEYKKRKESGVDQESEEDWEID

A0A6J1IKU3 high mobility group B protein 146.1e-5888.32Show/hide
Query:  DTGLSVKRSEEMKRSARASRF-NTEKRVKTTKKPKTKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQY
        DTGL VKRSEEMKRSA+  RF NTEK  KT K+PK+ QKKKNDKFD NKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACG+KWKTMTYEEKVQY
Subjt:  DTGLSVKRSEEMKRSARASRF-NTEKRVKTTKKPKTKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQY

Query:  YDIATEKRAEFDRAMAEYKKRKESGVDQESEEDWEID
        YDIA EKRAEFD+AMAEYKKRKESGVD+ESEEDWEID
Subjt:  YDIATEKRAEFDRAMAEYKKRKESGVDQESEEDWEID

SwissProt top hitse value%identityAlignment
O49595 High mobility group B protein 11.2e-1537.68Show/hide
Query:  SVKRSEEMKRSARASRFNTEKRVKTTKKPKTK------QKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQ
        + K  +++K +  A +   +++V   K P  K      +K+K  K D NKPK+ P+AFF FL+DFR  F+++NP+VK++  VGKA G+KWK+M+  EK  
Subjt:  SVKRSEEMKRSARASRFNTEKRVKTTKKPKTK------QKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQ

Query:  YYDIATEKRAEFDRAMAEYKKRKESGVDQESEEDWEID
        Y + A +++AE+++ M  Y K  E G D+  +   EI+
Subjt:  YYDIATEKRAEFDRAMAEYKKRKESGVDQESEEDWEID

O64702 High mobility group B protein 142.2e-3663.16Show/hide
Query:  RDTGLSVKRSEEMKRSARASRFNTEKRVKTTKKPKTKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQY
        R+  L+VK SE  +RS R        R++  +KPKT  KKK  K     PKKP TAFF+FLDDFRK++QE+NPDVKSMR++GK CGEKWKTMTYEEKV+Y
Subjt:  RDTGLSVKRSEEMKRSARASRFNTEKRVKTTKKPKTKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQY

Query:  YDIATEKRAEFDRAMAEYKKRKESGVDQESEED
        YDIATEKR EF RAM EY KR ESG   ESE D
Subjt:  YDIATEKRAEFDRAMAEYKKRKESGVDQESEED

P40619 HMG1/2-like protein4.0e-1436.84Show/hide
Query:  SRFNTEKRVKTTKKPKTKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDRAMAEYK
        S+  ++ ++   K+    +K K    D NKPK+PP+AFF F++DFRK ++E++P+ KS+  VGKA G+KWK +T  EK  +   A +++ E+++ +  Y 
Subjt:  SRFNTEKRVKTTKKPKTKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDRAMAEYK

Query:  KRKESGVDQESEED
        K++ +G  +E E D
Subjt:  KRKESGVDQESEED

P40620 HMG1/2-like protein2.3e-1438.71Show/hide
Query:  RSEEMKRSARASRFNTEKRVKTTKKPKTKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKR
        +S+   + A       +K    TK  K   K K  K D NKPK+PP+AFF F+ DFR+++++ +P+ KS+  VGKACGE+WK+++ EEK  Y D A +K+
Subjt:  RSEEMKRSARASRFNTEKRVKTTKKPKTKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKR

Query:  AEFDRAMAEYKKRKESGVDQESEE
         E++  +  Y K+ E   D+E  +
Subjt:  AEFDRAMAEYKKRKESGVDQESEE

Q42344 High mobility group B protein 48.0e-1540.52Show/hide
Query:  ARASRFNTEKRVKTTKKPKTKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDRAMA
        ++A   +T++R+KT  +   K+ KK    D N+PK+PP+AFF FL+DFRKEF   NP+ KS+  VGKA G +WK MT E+K  Y   A  ++ E+ + + 
Subjt:  ARASRFNTEKRVKTTKKPKTKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDRAMA

Query:  EYKKRKESGVDQESEE
        +Y  +  SG ++E ++
Subjt:  EYKKRKESGVDQESEE

Arabidopsis top hitse value%identityAlignment
AT2G34450.1 HMG-box (high mobility group) DNA-binding family protein1.5e-3763.16Show/hide
Query:  RDTGLSVKRSEEMKRSARASRFNTEKRVKTTKKPKTKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQY
        R+  L+VK SE  +RS R        R++  +KPKT  KKK  K     PKKP TAFF+FLDDFRK++QE+NPDVKSMR++GK CGEKWKTMTYEEKV+Y
Subjt:  RDTGLSVKRSEEMKRSARASRFNTEKRVKTTKKPKTKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQY

Query:  YDIATEKRAEFDRAMAEYKKRKESGVDQESEED
        YDIATEKR EF RAM EY KR ESG   ESE D
Subjt:  YDIATEKRAEFDRAMAEYKKRKESGVDQESEED

AT2G34450.2 HMG-box (high mobility group) DNA-binding family protein2.9e-3663.43Show/hide
Query:  RDTGLSVKRSEEMKRSARASRFNTEKRVKTTKKPKTKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDV-GKACGEKWKTMTYEEKVQ
        R+  L+VK SE  +RS R        R++  +KPKT  KKK  K     PKKP TAFF+FLDDFRK++QE+NPDVKSMR+V GK CGEKWKTMTYEEKV+
Subjt:  RDTGLSVKRSEEMKRSARASRFNTEKRVKTTKKPKTKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDV-GKACGEKWKTMTYEEKVQ

Query:  YYDIATEKRAEFDRAMAEYKKRKESGVDQESEED
        YYDIATEKR EF RAM EY KR ESG   ESE D
Subjt:  YYDIATEKRAEFDRAMAEYKKRKESGVDQESEED

AT3G51880.1 high mobility group B18.8e-1737.68Show/hide
Query:  SVKRSEEMKRSARASRFNTEKRVKTTKKPKTK------QKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQ
        + K  +++K +  A +   +++V   K P  K      +K+K  K D NKPK+ P+AFF FL+DFR  F+++NP+VK++  VGKA G+KWK+M+  EK  
Subjt:  SVKRSEEMKRSARASRFNTEKRVKTTKKPKTK------QKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQ

Query:  YYDIATEKRAEFDRAMAEYKKRKESGVDQESEEDWEID
        Y + A +++AE+++ M  Y K  E G D+  +   EI+
Subjt:  YYDIATEKRAEFDRAMAEYKKRKESGVDQESEEDWEID

AT3G51880.2 high mobility group B18.8e-1737.68Show/hide
Query:  SVKRSEEMKRSARASRFNTEKRVKTTKKPKTK------QKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQ
        + K  +++K +  A +   +++V   K P  K      +K+K  K D NKPK+ P+AFF FL+DFR  F+++NP+VK++  VGKA G+KWK+M+  EK  
Subjt:  SVKRSEEMKRSARASRFNTEKRVKTTKKPKTK------QKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQ

Query:  YYDIATEKRAEFDRAMAEYKKRKESGVDQESEEDWEID
        Y + A +++AE+++ M  Y K  E G D+  +   EI+
Subjt:  YYDIATEKRAEFDRAMAEYKKRKESGVDQESEEDWEID

AT3G51880.3 high mobility group B18.8e-1737.68Show/hide
Query:  SVKRSEEMKRSARASRFNTEKRVKTTKKPKTK------QKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQ
        + K  +++K +  A +   +++V   K P  K      +K+K  K D NKPK+ P+AFF FL+DFR  F+++NP+VK++  VGKA G+KWK+M+  EK  
Subjt:  SVKRSEEMKRSARASRFNTEKRVKTTKKPKTK------QKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQ

Query:  YYDIATEKRAEFDRAMAEYKKRKESGVDQESEEDWEID
        Y + A +++AE+++ M  Y K  E G D+  +   EI+
Subjt:  YYDIATEKRAEFDRAMAEYKKRKESGVDQESEEDWEID


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCTCATTTCAAATTTTGTGGAAGCCTTCAGGGATACGGGATTAAGCGTAAAAAGAAGTGAAGAGATGAAGAGGTCAGCAAGAGCTAGTAGATTTAACACGGAGAA
GAGGGTGAAGACAACTAAGAAGCCAAAAACAAAGCAGAAGAAGAAAAATGACAAATTTGATGCCAATAAGCCAAAGAAACCACCTACTGCTTTCTTTTACTTTTTGGATG
ACTTCCGCAAGGAATTTCAAGAACAAAATCCAGATGTCAAATCAATGCGTGATGTTGGCAAGGCATGTGGAGAGAAATGGAAAACAATGACGTATGAGGAAAAAGTACAA
TATTATGATATTGCCACGGAGAAACGTGCAGAGTTTGATAGAGCCATGGCAGAATATAAGAAGAGGAAGGAAAGTGGAGTAGATCAAGAATCTGAGGAAGATTGGGAGAT
TGATGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGCTCATTTCAAATTTTGTGGAAGCCTTCAGGGATACGGGATTAAGCGTAAAAAGAAGTGAAGAGATGAAGAGGTCAGCAAGAGCTAGTAGATTTAACACGGAGAA
GAGGGTGAAGACAACTAAGAAGCCAAAAACAAAGCAGAAGAAGAAAAATGACAAATTTGATGCCAATAAGCCAAAGAAACCACCTACTGCTTTCTTTTACTTTTTGGATG
ACTTCCGCAAGGAATTTCAAGAACAAAATCCAGATGTCAAATCAATGCGTGATGTTGGCAAGGCATGTGGAGAGAAATGGAAAACAATGACGTATGAGGAAAAAGTACAA
TATTATGATATTGCCACGGAGAAACGTGCAGAGTTTGATAGAGCCATGGCAGAATATAAGAAGAGGAAGGAAAGTGGAGTAGATCAAGAATCTGAGGAAGATTGGGAGAT
TGATGGATAG
Protein sequenceShow/hide protein sequence
MLLISNFVEAFRDTGLSVKRSEEMKRSARASRFNTEKRVKTTKKPKTKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQ
YYDIATEKRAEFDRAMAEYKKRKESGVDQESEEDWEIDG