; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0014027 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014027
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionE3 ubiquitin-protein ligase arkadia-A, putative
Genome locationchr1:54591327..54591980
RNA-Seq ExpressionLag0014027
SyntenyLag0014027
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052530.1 putative E3 ubiquitin-protein ligase arkadia-A [Cucumis melo var. makuwa]7.0e-5787.41Show/hide
Query:  MNLATTMDSPSMTAEPHKLQNIPSFKLSRYSSGVRDSDAGDDLRYTSLKDLLLNSPSYSGVNEFNEFNSSNISIRNELVKRAASAYLQSAAILVSRNESG
        MNL TTM+      + HKLQNIPSFKLSRYSS  RDSDAGDDLRYTSLKD+LLNSPSYSGVN+FNEFNSSNISIRNELVKRAASAYLQSAAILVSRNESG
Subjt:  MNLATTMDSPSMTAEPHKLQNIPSFKLSRYSSGVRDSDAGDDLRYTSLKDLLLNSPSYSGVNEFNEFNSSNISIRNELVKRAASAYLQSAAILVSRNESG

Query:  FVGFWERLRIKLAALRSRWWDCFHHIFGFFNFALD
        FVGFWERLRIKLAALRSRW DCFH IFGFF+FALD
Subjt:  FVGFWERLRIKLAALRSRWWDCFHHIFGFFNFALD

KAG6594453.1 hypothetical protein SDJN03_11006, partial [Cucurbita argyrosperma subsp. sororia]4.0e-5258.52Show/hide
Query:  MNTINSQTHPWPQIPIARVNFLLPWHLQPNPTPFSKPISTQHSNLHSESKPKSKSNSNSQNPEPKIGSKSPSSFNGYNPM-----PLMNLATTMDS----
        M T NS  HPWPQI IARV  L                             K K            GSKS +SFNGYNP+     PL+   TTMDS    
Subjt:  MNTINSQTHPWPQIPIARVNFLLPWHLQPNPTPFSKPISTQHSNLHSESKPKSKSNSNSQNPEPKIGSKSPSSFNGYNPM-----PLMNLATTMDS----

Query:  ---PSMTAEPHKLQNIPSFKLSRYSSGVRDSDAGDDLRYTSLKDLLLNSPSYSGVNEFNEFNSSNISIRNELVKRAASAYLQSAAILVSRNESGFVGFWE
           P  T E +KL N+ S KLSR+SS  RDSD  DDLRYTSLKD+LLNSPSYSGVN+FNEF+S NISIRNELVKRAASAYLQSAA LVSRNES  VGFW 
Subjt:  ---PSMTAEPHKLQNIPSFKLSRYSSGVRDSDAGDDLRYTSLKDLLLNSPSYSGVNEFNEFNSSNISIRNELVKRAASAYLQSAAILVSRNESGFVGFWE

Query:  RLRIKLAALRSRWWDCFHHIFGFFNFALD
        RLRIKLAALRSRW + FH+IFGFF FALD
Subjt:  RLRIKLAALRSRWWDCFHHIFGFFNFALD

XP_022925985.1 uncharacterized protein LOC111433238 [Cucurbita moschata]2.2e-5082.58Show/hide
Query:  MNLATTMDSPSMTAEPHKLQNIPSFKLSRYSSGVRDSDAGDDLRYTSLKDLLLNSPSYSGVNEFNEFNSSNISIRNELVKRAASAYLQSAAILVSRNESG
        MNL T   +     +PHKLQN+PSFKLSRYSS VRDSDAGDDLRYTSLKD+LLNSPSYSGVNEFNEFN SNI+IRNELVKRAASAYLQSAAILV RNES 
Subjt:  MNLATTMDSPSMTAEPHKLQNIPSFKLSRYSSGVRDSDAGDDLRYTSLKDLLLNSPSYSGVNEFNEFNSSNISIRNELVKRAASAYLQSAAILVSRNESG

Query:  FVGFWERLRIKLAALRSRWWDCFHHIFGFFNF
        FVGFWERLRIKLAALRSRW DCF   FGFF F
Subjt:  FVGFWERLRIKLAALRSRWWDCFHHIFGFFNF

XP_022977989.1 uncharacterized protein LOC111478115 [Cucurbita maxima]2.0e-5183.09Show/hide
Query:  MNLAT---TMDSPSMTAEPHKLQNIPSFKLSRYSSGVRDSDAGDDLRYTSLKDLLLNSPSYSGVNEFNEFNSSNISIRNELVKRAASAYLQSAAILVSRN
        MNL T   TMD      +PHKLQN+PSFKLSRYSS VRDSDAGDDLRYTSLKD+LLNSPSYSGVNEFNEFN SNI+IRNELVKRAASAYLQSAAILV RN
Subjt:  MNLAT---TMDSPSMTAEPHKLQNIPSFKLSRYSSGVRDSDAGDDLRYTSLKDLLLNSPSYSGVNEFNEFNSSNISIRNELVKRAASAYLQSAAILVSRN

Query:  ESGFVGFWERLRIKLAALRSRWWDCFHHIFGFFNFA
        ES FVGFWERLRIKLAALRSRW DCF   FGFF FA
Subjt:  ESGFVGFWERLRIKLAALRSRWWDCFHHIFGFFNFA

XP_023544918.1 uncharacterized protein LOC111804374 [Cucurbita pepo subsp. pepo]2.3e-5266.31Show/hide
Query:  PNPTPFSKPISTQHSNLHSESKPKSKSNSNSQNPEPKIGSKSPSSFNGYNPMPLMNLATTMDSPSMTAEPHKLQNIPSFKLSRYSSGVRDSDAGDDLRYT
        P+  P SK      +   S+  P+ + N   QN  P+         NG+NP+ +MNL T   +     +PHKLQN+PSFKLSRYSS VRDSDAGDDLRYT
Subjt:  PNPTPFSKPISTQHSNLHSESKPKSKSNSNSQNPEPKIGSKSPSSFNGYNPMPLMNLATTMDSPSMTAEPHKLQNIPSFKLSRYSSGVRDSDAGDDLRYT

Query:  SLKDLLLNSPSYSGVNEFNEFNSSNISIRNELVKRAASAYLQSAAILVSRNESGFVGFWERLRIKLAALRSRWWDCFHHIFGFFNFA
        SLKD+LLNSPSYSGVNEFNEFN SNI+IRNELVKRAASAYLQSAAILV RNES FVGFWERLRIKLAALRSRW DCF   FGFF FA
Subjt:  SLKDLLLNSPSYSGVNEFNEFNSSNISIRNELVKRAASAYLQSAAILVSRNESGFVGFWERLRIKLAALRSRWWDCFHHIFGFFNFA

TrEMBL top hitse value%identityAlignment
A0A0A0KKP9 Uncharacterized protein1.4e-5585.19Show/hide
Query:  MNLATTMDSPSMTAEPHKLQNIPSFKLSRYSSGVRDSDAGDDLRYTSLKDLLLNSPSYSGVNEFNEFNSSNISIRNELVKRAASAYLQSAAILVSRNESG
        MNL  T    +   +PH+LQNIPSFKLSRYSS  RDSDA DDLRYTSLKD+LLNSPSYSGVN+FNEFNSSNISIRNELVKRAASAYLQSAAILVSRNESG
Subjt:  MNLATTMDSPSMTAEPHKLQNIPSFKLSRYSSGVRDSDAGDDLRYTSLKDLLLNSPSYSGVNEFNEFNSSNISIRNELVKRAASAYLQSAAILVSRNESG

Query:  FVGFWERLRIKLAALRSRWWDCFHHIFGFFNFALD
        FVGFWERLRIKLAALRSRW DCFH IFGFF+FALD
Subjt:  FVGFWERLRIKLAALRSRWWDCFHHIFGFFNFALD

A0A5A7UBK0 Putative E3 ubiquitin-protein ligase arkadia-A3.4e-5787.41Show/hide
Query:  MNLATTMDSPSMTAEPHKLQNIPSFKLSRYSSGVRDSDAGDDLRYTSLKDLLLNSPSYSGVNEFNEFNSSNISIRNELVKRAASAYLQSAAILVSRNESG
        MNL TTM+      + HKLQNIPSFKLSRYSS  RDSDAGDDLRYTSLKD+LLNSPSYSGVN+FNEFNSSNISIRNELVKRAASAYLQSAAILVSRNESG
Subjt:  MNLATTMDSPSMTAEPHKLQNIPSFKLSRYSSGVRDSDAGDDLRYTSLKDLLLNSPSYSGVNEFNEFNSSNISIRNELVKRAASAYLQSAAILVSRNESG

Query:  FVGFWERLRIKLAALRSRWWDCFHHIFGFFNFALD
        FVGFWERLRIKLAALRSRW DCFH IFGFF+FALD
Subjt:  FVGFWERLRIKLAALRSRWWDCFHHIFGFFNFALD

A0A6J1CYB8 uncharacterized protein LOC1110157122.1e-4390.48Show/hide
Query:  AEPHKLQNIPSFKLSRYSSGVRDSDAGDDLRYTSLKDLLLNSPSYSGVNEFNEFNSSNISIRNELVKRAASAYLQSAAILVSRNESGFVGFWERLRIKLA
        +E HKLQNIPSFKLSRYSSG RDSDAGDDLRY SLKD+LLNSPSYSGVN+FN+FNSSNISIRNELVKRAASAYLQSAAILVSRNES FV FWERLR KLA
Subjt:  AEPHKLQNIPSFKLSRYSSGVRDSDAGDDLRYTSLKDLLLNSPSYSGVNEFNEFNSSNISIRNELVKRAASAYLQSAAILVSRNESGFVGFWERLRIKLA

Query:  ALRSR
        ALRSR
Subjt:  ALRSR

A0A6J1EJR7 uncharacterized protein LOC1114332381.0e-5082.58Show/hide
Query:  MNLATTMDSPSMTAEPHKLQNIPSFKLSRYSSGVRDSDAGDDLRYTSLKDLLLNSPSYSGVNEFNEFNSSNISIRNELVKRAASAYLQSAAILVSRNESG
        MNL T   +     +PHKLQN+PSFKLSRYSS VRDSDAGDDLRYTSLKD+LLNSPSYSGVNEFNEFN SNI+IRNELVKRAASAYLQSAAILV RNES 
Subjt:  MNLATTMDSPSMTAEPHKLQNIPSFKLSRYSSGVRDSDAGDDLRYTSLKDLLLNSPSYSGVNEFNEFNSSNISIRNELVKRAASAYLQSAAILVSRNESG

Query:  FVGFWERLRIKLAALRSRWWDCFHHIFGFFNF
        FVGFWERLRIKLAALRSRW DCF   FGFF F
Subjt:  FVGFWERLRIKLAALRSRWWDCFHHIFGFFNF

A0A6J1ISV4 uncharacterized protein LOC1114781159.5e-5283.09Show/hide
Query:  MNLAT---TMDSPSMTAEPHKLQNIPSFKLSRYSSGVRDSDAGDDLRYTSLKDLLLNSPSYSGVNEFNEFNSSNISIRNELVKRAASAYLQSAAILVSRN
        MNL T   TMD      +PHKLQN+PSFKLSRYSS VRDSDAGDDLRYTSLKD+LLNSPSYSGVNEFNEFN SNI+IRNELVKRAASAYLQSAAILV RN
Subjt:  MNLAT---TMDSPSMTAEPHKLQNIPSFKLSRYSSGVRDSDAGDDLRYTSLKDLLLNSPSYSGVNEFNEFNSSNISIRNELVKRAASAYLQSAAILVSRN

Query:  ESGFVGFWERLRIKLAALRSRWWDCFHHIFGFFNFA
        ES FVGFWERLRIKLAALRSRW DCF   FGFF FA
Subjt:  ESGFVGFWERLRIKLAALRSRWWDCFHHIFGFFNFA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G18395.1 unknown protein3.2e-0739.29Show/hide
Query:  VRDSDAGDDLRYTSLKDLLLNS---------PSYSGVNE----FNEFNSSNISIRNELVKRAASAYLQSAAILVSRNESGFVGF
        + D +  ++L+YTSLKD++ +S         P YS  ++     +E +SSNI+I NELVKRAAS Y+QS+ I+++ + + F  F
Subjt:  VRDSDAGDDLRYTSLKDLLLNS---------PSYSGVNE----FNEFNSSNISIRNELVKRAASAYLQSAAILVSRNESGFVGF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATACCATAAACTCCCAAACTCATCCATGGCCCCAAATCCCAATTGCCCGAGTCAATTTCCTACTTCCATGGCACCTTCAACCAAATCCAACCCCTTTCTCTAAACC
AATCTCAACCCAACATTCCAATCTCCATTCGGAATCGAAACCAAAATCAAAATCAAATTCAAATTCCCAAAACCCAGAGCCAAAAATTGGGTCCAAATCCCCAAGCTCCT
TTAATGGCTACAATCCCATGCCTCTGATGAATCTCGCAACAACAATGGATTCACCATCGATGACAGCAGAGCCTCATAAGCTTCAGAACATACCTTCTTTCAAGCTCTCC
CGGTACTCCTCCGGCGTCCGAGATTCCGACGCTGGCGATGACCTCCGGTACACCAGCCTCAAGGACCTTCTTCTGAACTCGCCGTCGTACAGCGGCGTAAATGAGTTCAA
CGAGTTCAATTCGTCCAACATTTCGATCCGAAACGAGCTGGTGAAACGGGCGGCGTCGGCGTACCTTCAATCGGCGGCGATTTTGGTCAGCCGGAACGAGAGCGGCTTCG
TCGGGTTTTGGGAGAGGCTTCGGATCAAACTCGCCGCCCTCCGTTCCCGATGGTGGGATTGTTTTCACCACATTTTTGGCTTCTTTAACTTTGCCCTAGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATACCATAAACTCCCAAACTCATCCATGGCCCCAAATCCCAATTGCCCGAGTCAATTTCCTACTTCCATGGCACCTTCAACCAAATCCAACCCCTTTCTCTAAACC
AATCTCAACCCAACATTCCAATCTCCATTCGGAATCGAAACCAAAATCAAAATCAAATTCAAATTCCCAAAACCCAGAGCCAAAAATTGGGTCCAAATCCCCAAGCTCCT
TTAATGGCTACAATCCCATGCCTCTGATGAATCTCGCAACAACAATGGATTCACCATCGATGACAGCAGAGCCTCATAAGCTTCAGAACATACCTTCTTTCAAGCTCTCC
CGGTACTCCTCCGGCGTCCGAGATTCCGACGCTGGCGATGACCTCCGGTACACCAGCCTCAAGGACCTTCTTCTGAACTCGCCGTCGTACAGCGGCGTAAATGAGTTCAA
CGAGTTCAATTCGTCCAACATTTCGATCCGAAACGAGCTGGTGAAACGGGCGGCGTCGGCGTACCTTCAATCGGCGGCGATTTTGGTCAGCCGGAACGAGAGCGGCTTCG
TCGGGTTTTGGGAGAGGCTTCGGATCAAACTCGCCGCCCTCCGTTCCCGATGGTGGGATTGTTTTCACCACATTTTTGGCTTCTTTAACTTTGCCCTAGACTAG
Protein sequenceShow/hide protein sequence
MNTINSQTHPWPQIPIARVNFLLPWHLQPNPTPFSKPISTQHSNLHSESKPKSKSNSNSQNPEPKIGSKSPSSFNGYNPMPLMNLATTMDSPSMTAEPHKLQNIPSFKLS
RYSSGVRDSDAGDDLRYTSLKDLLLNSPSYSGVNEFNEFNSSNISIRNELVKRAASAYLQSAAILVSRNESGFVGFWERLRIKLAALRSRWWDCFHHIFGFFNFALD