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Lag0014034 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014034
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationchr1:54651021..54653847
RNA-Seq ExpressionLag0014034
SyntenyLag0014034
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW27595.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]4.2e-2539.22Show/hide
Query:  GQILVQFLYPTFPLCIPRNLI-GSNKGFIKGFRVGKEEVEVSHIQFADDTLLFCDGHTQFVKNWKTFTKFYEKASGLSINMQKTGIVGINMEEGGVARMA
        G  L  FL+      + R L+    +  ++GFRVG+    VSH+QFADDT+ F +   + ++  K+    +   SGL +N+ K+ I GIN++   ++R+A
Subjt:  GQILVQFLYPTFPLCIPRNLI-GSNKGFIKGFRVGKEEVEVSHIQFADDTLLFCDGHTQFVKNWKTFTKFYEKASGLSINMQKTGIVGINMEEGGVARMA

Query:  EILGCKAEGLPFNYLGVTVGGRPRVASFWDPVLEAICTKLALW-KGFSDFQRG
        E LGCKA G P  YLG+ +GG PR   FWDPV+E I  +L  W K +  F  G
Subjt:  EILGCKAEGLPFNYLGVTVGGRPRVASFWDPVLEAICTKLALW-KGFSDFQRG

RVW27936.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]3.2e-2542.86Show/hide
Query:  KGFIKGFRVGKEEVEVSHIQFADDTLLFCDGHTQFVKNWKTFTKFYEKASGLSINMQKTGIVGINMEEGGVARMAEILGCKAEGLPFNYLGVTVGGRPRV
        +  ++GFRVG+    VSH+QFADDT+ F +   + ++  K+    +   SGL +N+ K+ I GIN++   ++R+AE LGCKA G P  YLG+ +GG PR 
Subjt:  KGFIKGFRVGKEEVEVSHIQFADDTLLFCDGHTQFVKNWKTFTKFYEKASGLSINMQKTGIVGINMEEGGVARMAEILGCKAEGLPFNYLGVTVGGRPRV

Query:  ASFWDPVLEAICTKLALW-KGFSDFQRGKNNSH
          FWDPV+E I  +L  W K +  F  G++NSH
Subjt:  ASFWDPVLEAICTKLALW-KGFSDFQRGKNNSH

RVW75343.1 LINE-1 reverse transcriptase-like [Vitis vinifera]5.5e-2539.58Show/hide
Query:  GQILVQFLYPTFPLCIPRNLI-GSNKGFIKGFRVGKEEVEVSHIQFADDTLLFCDGHTQFVKNWKTFTKFYEKASGLSINMQKTGIVGINMEEGGVARMA
        G  L  FL+      + R L+    +  ++GFRVG+    VSH+QFADDT+ F +   + ++  K+    +   SGL +N+ K+ I GIN++   ++R+A
Subjt:  GQILVQFLYPTFPLCIPRNLI-GSNKGFIKGFRVGKEEVEVSHIQFADDTLLFCDGHTQFVKNWKTFTKFYEKASGLSINMQKTGIVGINMEEGGVARMA

Query:  EILGCKAEGLPFNYLGVTVGGRPRVASFWDPVLEAICTKLALWK
        E LGCKA G P  YLG+ +GG PR   FWDPV+E I  +L  W+
Subjt:  EILGCKAEGLPFNYLGVTVGGRPRVASFWDPVLEAICTKLALWK

XP_015945213.1 uncharacterized protein LOC107470339 [Arachis duranensis]5.5e-2545.76Show/hide
Query:  GFIKGFRVGKEEVEVSHIQFADDTLLFCDGHTQFVKNWKTFTKFYEKASGLSINMQKTGIVGINMEEGGVARMAEILGCKAEGLPFNYLGVTVGGRPRVA
        G I    VG++ VE+SH+QFADDT+LFC    + +KN+K   +++E  SGLSIN +K+ ++ IN EE  V RM  + GCK + LP  YLGV +G  PR+ 
Subjt:  GFIKGFRVGKEEVEVSHIQFADDTLLFCDGHTQFVKNWKTFTKFYEKASGLSINMQKTGIVGINMEEGGVARMAEILGCKAEGLPFNYLGVTVGGRPRVA

Query:  SFWDPVLEAICTKLALWK
          W P+++ +  KL+LWK
Subjt:  SFWDPVLEAICTKLALWK

XP_016204098.1 uncharacterized protein LOC107644684 [Arachis ipaensis]3.2e-2544.07Show/hide
Query:  GFIKGFRVGKEEVEVSHIQFADDTLLFCDGHTQFVKNWKTFTKFYEKASGLSINMQKTGIVGINMEEGGVARMAEILGCKAEGLPFNYLGVTVGGRPRVA
        G +    VG++ V++SH+QFADDT+LFC    + +KN+K   + +E  SGLSIN +K+ ++ IN +E  V RM  +LGCK E LP  YLG+++G  PR+ 
Subjt:  GFIKGFRVGKEEVEVSHIQFADDTLLFCDGHTQFVKNWKTFTKFYEKASGLSINMQKTGIVGINMEEGGVARMAEILGCKAEGLPFNYLGVTVGGRPRVA

Query:  SFWDPVLEAICTKLALWK
          W P+++ +  KL+LWK
Subjt:  SFWDPVLEAICTKLALWK

TrEMBL top hitse value%identityAlignment
A0A438CEZ3 LINE-1 retrotransposable element ORF2 protein2.6e-2539.58Show/hide
Query:  GQILVQFLYPTFPLCIPRNLI-GSNKGFIKGFRVGKEEVEVSHIQFADDTLLFCDGHTQFVKNWKTFTKFYEKASGLSINMQKTGIVGINMEEGGVARMA
        G  L  FL+      + R L+    +  ++GFRVG+    VSH+QFADDT+ F +   + ++  K+    +   SGL +N+ K+ I GIN++   ++R+A
Subjt:  GQILVQFLYPTFPLCIPRNLI-GSNKGFIKGFRVGKEEVEVSHIQFADDTLLFCDGHTQFVKNWKTFTKFYEKASGLSINMQKTGIVGINMEEGGVARMA

Query:  EILGCKAEGLPFNYLGVTVGGRPRVASFWDPVLEAICTKLALWK
        E LGCKA G P  YLG+ +GG PR   FWDPV+E I  +L  W+
Subjt:  EILGCKAEGLPFNYLGVTVGGRPRVASFWDPVLEAICTKLALWK

A0A438CWL6 Transposon TX1 uncharacterized 149 kDa protein2.0e-2539.22Show/hide
Query:  GQILVQFLYPTFPLCIPRNLI-GSNKGFIKGFRVGKEEVEVSHIQFADDTLLFCDGHTQFVKNWKTFTKFYEKASGLSINMQKTGIVGINMEEGGVARMA
        G  L  FL+      + R L+    +  ++GFRVG+    VSH+QFADDT+ F +   + ++  K+    +   SGL +N+ K+ I GIN++   ++R+A
Subjt:  GQILVQFLYPTFPLCIPRNLI-GSNKGFIKGFRVGKEEVEVSHIQFADDTLLFCDGHTQFVKNWKTFTKFYEKASGLSINMQKTGIVGINMEEGGVARMA

Query:  EILGCKAEGLPFNYLGVTVGGRPRVASFWDPVLEAICTKLALW-KGFSDFQRG
        E LGCKA G P  YLG+ +GG PR   FWDPV+E I  +L  W K +  F  G
Subjt:  EILGCKAEGLPFNYLGVTVGGRPRVASFWDPVLEAICTKLALW-KGFSDFQRG

A0A438CXL8 Transposon TX1 uncharacterized 149 kDa protein1.5e-2542.86Show/hide
Query:  KGFIKGFRVGKEEVEVSHIQFADDTLLFCDGHTQFVKNWKTFTKFYEKASGLSINMQKTGIVGINMEEGGVARMAEILGCKAEGLPFNYLGVTVGGRPRV
        +  ++GFRVG+    VSH+QFADDT+ F +   + ++  K+    +   SGL +N+ K+ I GIN++   ++R+AE LGCKA G P  YLG+ +GG PR 
Subjt:  KGFIKGFRVGKEEVEVSHIQFADDTLLFCDGHTQFVKNWKTFTKFYEKASGLSINMQKTGIVGINMEEGGVARMAEILGCKAEGLPFNYLGVTVGGRPRV

Query:  ASFWDPVLEAICTKLALW-KGFSDFQRGKNNSH
          FWDPV+E I  +L  W K +  F  G++NSH
Subjt:  ASFWDPVLEAICTKLALW-KGFSDFQRGKNNSH

A0A438GT11 LINE-1 reverse transcriptase-like2.6e-2539.58Show/hide
Query:  GQILVQFLYPTFPLCIPRNLI-GSNKGFIKGFRVGKEEVEVSHIQFADDTLLFCDGHTQFVKNWKTFTKFYEKASGLSINMQKTGIVGINMEEGGVARMA
        G  L  FL+      + R L+    +  ++GFRVG+    VSH+QFADDT+ F +   + ++  K+    +   SGL +N+ K+ I GIN++   ++R+A
Subjt:  GQILVQFLYPTFPLCIPRNLI-GSNKGFIKGFRVGKEEVEVSHIQFADDTLLFCDGHTQFVKNWKTFTKFYEKASGLSINMQKTGIVGINMEEGGVARMA

Query:  EILGCKAEGLPFNYLGVTVGGRPRVASFWDPVLEAICTKLALWK
        E LGCKA G P  YLG+ +GG PR   FWDPV+E I  +L  W+
Subjt:  EILGCKAEGLPFNYLGVTVGGRPRVASFWDPVLEAICTKLALWK

A5B034 Reverse transcriptase domain-containing protein2.6e-2539.58Show/hide
Query:  GQILVQFLYPTFPLCIPRNLI-GSNKGFIKGFRVGKEEVEVSHIQFADDTLLFCDGHTQFVKNWKTFTKFYEKASGLSINMQKTGIVGINMEEGGVARMA
        G  L  FL+      + R L+    +  ++GFRVG+    VSH+QFADDT+ F +   + ++  K+    +   SGL +N+ K+ I GIN++   ++R+A
Subjt:  GQILVQFLYPTFPLCIPRNLI-GSNKGFIKGFRVGKEEVEVSHIQFADDTLLFCDGHTQFVKNWKTFTKFYEKASGLSINMQKTGIVGINMEEGGVARMA

Query:  EILGCKAEGLPFNYLGVTVGGRPRVASFWDPVLEAICTKLALWK
        E LGCKA G P  YLG+ +GG PR   FWDPV+E I  +L  W+
Subjt:  EILGCKAEGLPFNYLGVTVGGRPRVASFWDPVLEAICTKLALWK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTGCTTCGCCGTCGTCATCACAAAGCCTTCAGCGGCGGCGCTTTCGCTTGTGTCACACTGGAAGAAGAAACACCTTCTTCTCTGTACAAGCTTCCGGGAGGTGG
AGGATGTTGTTTTCTCGTGGACTTTCCCGGATTTCGAGGATTCCCAGAAACAGCTGTTGTTGTCGGTGGTTTCTTTCTCATCGGTCAGATACTCGTCCAGTTCTTATACC
CAACATTCCCTCTTTGCATCCCTCGGAATCTGATCGGCAGTAATAAAGGCTTCATAAAAGGCTTTAGAGTTGGAAAGGAGGAGGTGGAGGTGTCCCACATCCAATTTGCA
GATGACACCCTTTTGTTTTGTGATGGCCACACTCAATTTGTGAAGAATTGGAAGACCTTTACGAAGTTCTATGAAAAAGCCTCTGGACTCTCAATTAATATGCAAAAGAC
AGGCATTGTAGGCATTAATATGGAAGAAGGGGGAGTGGCTCGTATGGCTGAGATTTTAGGGTGCAAAGCAGAGGGCCTTCCTTTTAATTATCTGGGAGTTACAGTGGGTG
GAAGACCAAGGGTGGCTTCATTTTGGGACCCGGTTTTGGAAGCTATTTGCACAAAGCTTGCTCTTTGGAAGGGTTTTTCCGATTTCCAAAGGGGGAAGAACAACTCTCAT
TAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGTGCTTCGCCGTCGTCATCACAAAGCCTTCAGCGGCGGCGCTTTCGCTTGTGTCACACTGGAAGAAGAAACACCTTCTTCTCTGTACAAGCTTCCGGGAGGTGG
AGGATGTTGTTTTCTCGTGGACTTTCCCGGATTTCGAGGATTCCCAGAAACAGCTGTTGTTGTCGGTGGTTTCTTTCTCATCGGTCAGATACTCGTCCAGTTCTTATACC
CAACATTCCCTCTTTGCATCCCTCGGAATCTGATCGGCAGTAATAAAGGCTTCATAAAAGGCTTTAGAGTTGGAAAGGAGGAGGTGGAGGTGTCCCACATCCAATTTGCA
GATGACACCCTTTTGTTTTGTGATGGCCACACTCAATTTGTGAAGAATTGGAAGACCTTTACGAAGTTCTATGAAAAAGCCTCTGGACTCTCAATTAATATGCAAAAGAC
AGGCATTGTAGGCATTAATATGGAAGAAGGGGGAGTGGCTCGTATGGCTGAGATTTTAGGGTGCAAAGCAGAGGGCCTTCCTTTTAATTATCTGGGAGTTACAGTGGGTG
GAAGACCAAGGGTGGCTTCATTTTGGGACCCGGTTTTGGAAGCTATTTGCACAAAGCTTGCTCTTTGGAAGGGTTTTTCCGATTTCCAAAGGGGGAAGAACAACTCTCAT
TAA
Protein sequenceShow/hide protein sequence
MAVLRRRHHKAFSGGAFACVTLEEETPSSLYKLPGGGGCCFLVDFPGFRGFPETAVVVGGFFLIGQILVQFLYPTFPLCIPRNLIGSNKGFIKGFRVGKEEVEVSHIQFA
DDTLLFCDGHTQFVKNWKTFTKFYEKASGLSINMQKTGIVGINMEEGGVARMAEILGCKAEGLPFNYLGVTVGGRPRVASFWDPVLEAICTKLALWKGFSDFQRGKNNSH