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Lag0014035 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014035
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr1:54654101..54654595
RNA-Seq ExpressionLag0014035
SyntenyLag0014035
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABA97687.1 retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]9.1e-1733.62Show/hide
Query:  QSSSSPWRDIASLAGFYKHNNRYKVGRGDKVRFWEDNWLSERPLKERFPCIYRLSMAKEAKVSELWNGFTWDLKLRRGIFDREMNIWIEMLSLLSQINLN
        + +S  W+ +  +  + K ++ Y +G+GD +RFW+D W+ + PLK + P IY +   KE  V + WN  +W++ LRR +  RE+  W ++L+ L Q+ L 
Subjt:  QSSSSPWRDIASLAGFYKHNNRYKVGRGDKVRFWEDNWLSERPLKERFPCIYRLSMAKEAKVSELWNGFTWDLKLRRGIFDREMNIWIEMLSLLSQINLN

Query:  GNEDVVQWNLEGSRIF
           D++ W L  S I+
Subjt:  GNEDVVQWNLEGSRIF

EAZ20332.1 hypothetical protein OsJ_35941 [Oryza sativa Japonica Group]9.1e-1733.62Show/hide
Query:  QSSSSPWRDIASLAGFYKHNNRYKVGRGDKVRFWEDNWLSERPLKERFPCIYRLSMAKEAKVSELWNGFTWDLKLRRGIFDREMNIWIEMLSLLSQINLN
        + +S  W+ +  +  + K ++ Y +G+GD +RFW+D W+ + PLK + P IY +   KE  V + WN  +W++ LRR +  RE+  W ++L+ L Q+ L 
Subjt:  QSSSSPWRDIASLAGFYKHNNRYKVGRGDKVRFWEDNWLSERPLKERFPCIYRLSMAKEAKVSELWNGFTWDLKLRRGIFDREMNIWIEMLSLLSQINLN

Query:  GNEDVVQWNLEGSRIF
           D++ W L  S I+
Subjt:  GNEDVVQWNLEGSRIF

TQD93576.1 hypothetical protein C1H46_020784 [Malus baccata]3.2e-1435.83Show/hide
Query:  SSSSPWRDIASLAGFYKHNNRYKVGRGDKVRFWEDNWLSERPLKERFPCIYRLSMAKEAKVSEL----WNGFTWDLKLRRGIFDREMNIWIEMLSLLSQI
        SS SPW+DI+S +  + H  +++VG G++VRFWED WL   PLKE+FP ++ LS      +S       N  +W+   RR + + E+     +L  + ++
Subjt:  SSSSPWRDIASLAGFYKHNNRYKVGRGDKVRFWEDNWLSERPLKERFPCIYRLSMAKEAKVSEL----WNGFTWDLKLRRGIFDREMNIWIEMLSLLSQI

Query:  NLN-GNEDVVQWNLEGSRIF
         L+    D  +W LE SR+F
Subjt:  NLN-GNEDVVQWNLEGSRIF

XP_015161868.1 PREDICTED: uncharacterized protein LOC107059660 [Solanum tuberosum]5.5e-1438.6Show/hide
Query:  SSPWRDIASLAGFYKHNNRYKVGRGDKVRFWEDNWLSERPLKERFPCIYRLSMAKEAKVSELWNGFTWDLKLRRGIFDREMNIWIEMLSLLSQI-NLNGN
        S  WR I SL   + +  + KVG G +  FWED W+ +  L+ RFP ++ +S+ KEA + E+ +   WDL+ RR + D E+N  +E+L++L Q  +LN N
Subjt:  SSPWRDIASLAGFYKHNNRYKVGRGDKVRFWEDNWLSERPLKERFPCIYRLSMAKEAKVSELWNGFTWDLKLRRGIFDREMNIWIEMLSLLSQI-NLNGN

Query:  EDVVQWNLEGSRIF
        E  + WN +   IF
Subjt:  EDVVQWNLEGSRIF

XP_022149391.1 uncharacterized protein LOC111017819 [Momordica charantia]1.4e-1440.52Show/hide
Query:  QSSSSPWRD-IASLAGFYKHN--NRYKVGRGDKVRFWEDNWLSERPLKERFPCIYRLSMAKEAKVSELWNGF--TWDLKLRRGIFDREMNIWIEMLSLLS
        Q S + WR  I+S+ G   H    +   G+G ++RFW D W  E  L E FP +Y +S+ KEA V++ W+    TWDL  RRG+FDRE+  W  M+  L 
Subjt:  QSSSSPWRD-IASLAGFYKHN--NRYKVGRGDKVRFWEDNWLSERPLKERFPCIYRLSMAKEAKVSELWNGF--TWDLKLRRGIFDREMNIWIEMLSLLS

Query:  QINLNGNEDVVQWNLE
           L    D V W LE
Subjt:  QINLNGNEDVVQWNLE

TrEMBL top hitse value%identityAlignment
A0A540M4H0 zf-RVT domain-containing protein1.6e-1435.83Show/hide
Query:  SSSSPWRDIASLAGFYKHNNRYKVGRGDKVRFWEDNWLSERPLKERFPCIYRLSMAKEAKVSEL----WNGFTWDLKLRRGIFDREMNIWIEMLSLLSQI
        SS SPW+DI+S +  + H  +++VG G++VRFWED WL   PLKE+FP ++ LS      +S       N  +W+   RR + + E+     +L  + ++
Subjt:  SSSSPWRDIASLAGFYKHNNRYKVGRGDKVRFWEDNWLSERPLKERFPCIYRLSMAKEAKVSEL----WNGFTWDLKLRRGIFDREMNIWIEMLSLLSQI

Query:  NLN-GNEDVVQWNLEGSRIF
         L+    D  +W LE SR+F
Subjt:  NLN-GNEDVVQWNLEGSRIF

A0A6J1D884 uncharacterized protein LOC1110178197.0e-1540.52Show/hide
Query:  QSSSSPWRD-IASLAGFYKHN--NRYKVGRGDKVRFWEDNWLSERPLKERFPCIYRLSMAKEAKVSELWNGF--TWDLKLRRGIFDREMNIWIEMLSLLS
        Q S + WR  I+S+ G   H    +   G+G ++RFW D W  E  L E FP +Y +S+ KEA V++ W+    TWDL  RRG+FDRE+  W  M+  L 
Subjt:  QSSSSPWRD-IASLAGFYKHN--NRYKVGRGDKVRFWEDNWLSERPLKERFPCIYRLSMAKEAKVSELWNGF--TWDLKLRRGIFDREMNIWIEMLSLLS

Query:  QINLNGNEDVVQWNLE
           L    D V W LE
Subjt:  QINLNGNEDVVQWNLE

A3CGW9 Uncharacterized protein4.4e-1733.62Show/hide
Query:  QSSSSPWRDIASLAGFYKHNNRYKVGRGDKVRFWEDNWLSERPLKERFPCIYRLSMAKEAKVSELWNGFTWDLKLRRGIFDREMNIWIEMLSLLSQINLN
        + +S  W+ +  +  + K ++ Y +G+GD +RFW+D W+ + PLK + P IY +   KE  V + WN  +W++ LRR +  RE+  W ++L+ L Q+ L 
Subjt:  QSSSSPWRDIASLAGFYKHNNRYKVGRGDKVRFWEDNWLSERPLKERFPCIYRLSMAKEAKVSELWNGFTWDLKLRRGIFDREMNIWIEMLSLLSQINLN

Query:  GNEDVVQWNLEGSRIF
           D++ W L  S I+
Subjt:  GNEDVVQWNLEGSRIF

M1A801 zf-RVT domain-containing protein9.2e-1538.05Show/hide
Query:  SPWRDIASLAGFYKHNNRYKVGRGDKVRFWEDNWLSERPLKERFPCIYRLSMAKEAKVSELWNGFTWDLKLRRGIFDREMNIWIEMLSLLSQ-INLNGNE
        S WR I  L          KVG G+KV FW+D W  + PL + FP +Y L  A++A V+ELW G  W+L+LRR + D E+N   +  + + Q +NL   +
Subjt:  SPWRDIASLAGFYKHNNRYKVGRGDKVRFWEDNWLSERPLKERFPCIYRLSMAKEAKVSELWNGFTWDLKLRRGIFDREMNIWIEMLSLLSQ-INLNGNE

Query:  DVVQWNLEGSRIF
        D + W ++   IF
Subjt:  DVVQWNLEGSRIF

Q2QSD3 Retrotransposon protein, putative, unclassified4.4e-1733.62Show/hide
Query:  QSSSSPWRDIASLAGFYKHNNRYKVGRGDKVRFWEDNWLSERPLKERFPCIYRLSMAKEAKVSELWNGFTWDLKLRRGIFDREMNIWIEMLSLLSQINLN
        + +S  W+ +  +  + K ++ Y +G+GD +RFW+D W+ + PLK + P IY +   KE  V + WN  +W++ LRR +  RE+  W ++L+ L Q+ L 
Subjt:  QSSSSPWRDIASLAGFYKHNNRYKVGRGDKVRFWEDNWLSERPLKERFPCIYRLSMAKEAKVSELWNGFTWDLKLRRGIFDREMNIWIEMLSLLSQINLN

Query:  GNEDVVQWNLEGSRIF
           D++ W L  S I+
Subjt:  GNEDVVQWNLEGSRIF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCTGACTTTATTCGCAATCCCCTCTCCTTTAAGTGTTGGCAGTCCTCGAGCAGCCCTTGGAGGGATATTGCTAGCTTGGCCGGTTTCTACAAGCATAACAATAG
ATATAAGGTGGGTAGGGGTGATAAGGTTAGGTTTTGGGAGGATAATTGGCTCTCTGAAAGGCCTTTAAAAGAACGGTTTCCTTGTATTTATCGCCTATCTATGGCTAAGG
AAGCCAAAGTCTCTGAGCTCTGGAATGGATTCACATGGGATCTTAAGTTGAGGAGGGGTATCTTCGATAGAGAGATGAACATCTGGATTGAGATGTTATCTCTTCTATCC
CAAATCAACCTTAATGGTAATGAAGACGTGGTGCAATGGAATTTAGAAGGATCAAGGATTTTTTTAAATGAAATCAGCCCTCTTGTCTCTTCAACAAAGGAGAAGACTGT
TGGAGGAAGATTTGTGCACTCAGATTTGGGAAGGCTCGGTTCCGAAGAGGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGCTGACTTTATTCGCAATCCCCTCTCCTTTAAGTGTTGGCAGTCCTCGAGCAGCCCTTGGAGGGATATTGCTAGCTTGGCCGGTTTCTACAAGCATAACAATAG
ATATAAGGTGGGTAGGGGTGATAAGGTTAGGTTTTGGGAGGATAATTGGCTCTCTGAAAGGCCTTTAAAAGAACGGTTTCCTTGTATTTATCGCCTATCTATGGCTAAGG
AAGCCAAAGTCTCTGAGCTCTGGAATGGATTCACATGGGATCTTAAGTTGAGGAGGGGTATCTTCGATAGAGAGATGAACATCTGGATTGAGATGTTATCTCTTCTATCC
CAAATCAACCTTAATGGTAATGAAGACGTGGTGCAATGGAATTTAGAAGGATCAAGGATTTTTTTAAATGAAATCAGCCCTCTTGTCTCTTCAACAAAGGAGAAGACTGT
TGGAGGAAGATTTGTGCACTCAGATTTGGGAAGGCTCGGTTCCGAAGAGGGTTAA
Protein sequenceShow/hide protein sequence
MGADFIRNPLSFKCWQSSSSPWRDIASLAGFYKHNNRYKVGRGDKVRFWEDNWLSERPLKERFPCIYRLSMAKEAKVSELWNGFTWDLKLRRGIFDREMNIWIEMLSLLS
QINLNGNEDVVQWNLEGSRIFLNEISPLVSSTKEKTVGGRFVHSDLGRLGSEEG