CuGenDBv2

Gene ID	Lag0014049
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Nucleoporin protein Ndc1-Nup
Genome location	chr1:54784003..54788782
RNA-Seq Expression	Lag0014049
Synteny	Lag0014049
Gene Ontology terms	GO:0006999 - nuclear pore organization (biological process) GO:0015031 - protein transport (biological process) GO:0051028 - mRNA transport (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0070762 - nuclear pore transmembrane ring (cellular component) GO:0030674 - protein binding, bridging (molecular function)
InterPro domains	IPR019049 - Nucleoporin protein Ndc1-Nup

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0052512.1 Ndc1_Nup domain-containing protein [Cucumis melo var. makuwa]

9.6e-246

88.62

Show/hide

Query:  PISPFCFIAHWVPYFLTFHLSQLLFSASLSLLASPQLERPAAPLELAFGLVRFLVVSGGDNASSTSASKDFRRRAMVSFYLVLFVVATAVSGSLAAVSIC
        P +PF  +      FLTFHLSQLLFS+SLSLLASPQLERPAAPLEL FGLVRFLVVSGGDNASS SA KDFRRRAMVSFYL+LFVVATAVSGSLAAVSIC
Subjt:  PISPFCFIAHWVPYFLTFHLSQLLFSASLSLLASPQLERPAAPLELAFGLVRFLVVSGGDNASSTSASKDFRRRAMVSFYLVLFVVATAVSGSLAAVSIC

Query:  WGKSDGLRSAWLTGLSMGLIYGSFYVYKKRWVLTFPIIQLETGARSAPFFSFKMGFPSATTLASKLSAAAFLFSVLLMVLFPDQLKRNVTVRKFIANQAI
        WGKSDGLRSAW TGL MGLIYGSFYVYKKRWVL FPIIQ        PFFSFKMGFPSATTLASKLSAA FLFS +LMVL PDQ K+NVTVRKFIANQ I
Subjt:  WGKSDGLRSAWLTGLSMGLIYGSFYVYKKRWVLTFPIIQLETGARSAPFFSFKMGFPSATTLASKLSAAAFLFSVLLMVLFPDQLKRNVTVRKFIANQAI

Query:  IFVGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEYLFAALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLK
        +F+GSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSE+LFAALEDSNSGSLLQYLAFLDLCMVCE NVDIWRRAAFFEETG+TYKRVISISL+
Subjt:  IFVGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEYLFAALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLK

Query:  PLEQFALNLGEGLEGAVDRTWQLSKQLLPPKDSHFDLKQLETLKNFQLYAWCARTVSTLTARSHSEDRFGVAQLSGSNASVMSTLLSCLLAVEVLMGKKT
        PLEQFALNLG+GLEGAVD T QLS+QLLPP D HFD+KQLE LKNFQLYAWCARTVSTLTARSH EDRFGVAQLSGSNA+VMSTLLSCLLAVEVLMGKKT
Subjt:  PLEQFALNLGEGLEGAVDRTWQLSKQLLPPKDSHFDLKQLETLKNFQLYAWCARTVSTLTARSHSEDRFGVAQLSGSNASVMSTLLSCLLAVEVLMGKKT

Query:  NIQSSHDLFGPASIKWATSSIGRVDASVGKKKSGPLHSKAYAIADVLRVSIYLIVSTFHSEMLNSAKSGVLEKDWITGEKPPFGTRELLLQKLHIFLDFQ
        NIQSSHDLFGPA IKWAT+SI RVDASVGKKKSGPLHSKAYAIADVLRVSIYLIV+ FH+EMLNSAKSGVLEKDWIT EKPPFGTRELLLQKLHIFLDFQ
Subjt:  NIQSSHDLFGPASIKWATSSIGRVDASVGKKKSGPLHSKAYAIADVLRVSIYLIVSTFHSEMLNSAKSGVLEKDWITGEKPPFGTRELLLQKLHIFLDFQ

Query:  A
        A
Subjt:  A

XP_004134593.1 uncharacterized protein LOC101219057 [Cucumis sativus]

4.5e-243

87.25

Show/hide

Query:  EPISPFCFIAHWVPYFLTFHLSQLLFSASLSLLASPQLERPAAPLELAFGLVRFLVVSGGDNASSTSASKDFRRRAMVSFYLVLFVVATAVSGSLAAVSI
        +P +PF  +      FLTFHLSQLLFS+SLSLLASPQLERPAAPLEL FGLVRFLVVSGGDNASS SA KDFRRRAMVSFYLVLFVVATAVSGSLAAVSI
Subjt:  EPISPFCFIAHWVPYFLTFHLSQLLFSASLSLLASPQLERPAAPLELAFGLVRFLVVSGGDNASSTSASKDFRRRAMVSFYLVLFVVATAVSGSLAAVSI

Query:  CWGKSDGLRSAWLTGLSMGLIYGSFYVYKKRWVLTFPIIQLETGARSAPFFSFKMGFPSATTLASKLSAAAFLFSVLLMVLFPDQLKRNVTVRKFIANQA
        CWGKSDGLRSAW  GL MGLIYG FYVYKKRWVL FPIIQ        PFFSFKMGFPSATTLASKLSAA FLFS +LMVL PDQ K+NVTVRKFI NQ 
Subjt:  CWGKSDGLRSAWLTGLSMGLIYGSFYVYKKRWVLTFPIIQLETGARSAPFFSFKMGFPSATTLASKLSAAAFLFSVLLMVLFPDQLKRNVTVRKFIANQA

Query:  IIFVGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEYLFAALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISL
        I+F+GSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSE+LFAALEDSNSGSLLQYLAFLDLCMVCE NVDIWRRAAFFEETG+TYKRVISISL
Subjt:  IIFVGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEYLFAALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISL

Query:  KPLEQFALNLGEGLEGAVDRTWQLSKQLLPPKDSHFDLKQLETLKNFQLYAWCARTVSTLTARSHSEDRFGVAQLSGSNASVMSTLLSCLLAVEVLMGKK
        +PLEQFALNLG+GLEGA+D T QLS+QLLPP DSHFD+KQL+ LKNFQLYAWCARTVSTLTARSH EDRFGVAQLSGSNA+VMSTLLSCLLAVEVLMGKK
Subjt:  KPLEQFALNLGEGLEGAVDRTWQLSKQLLPPKDSHFDLKQLETLKNFQLYAWCARTVSTLTARSHSEDRFGVAQLSGSNASVMSTLLSCLLAVEVLMGKK

Query:  TNIQSSHDLFGPASIKWATSSIGRVDASVGKKKSGPLHSKAYAIADVLRVSIYLIVSTFHSEMLNSAKSGVLEKDWITGEKPPFGTRELLLQKLHIFLDF
        TN+QSSH+LFGPA IKWATSSI RVDASVGKKK+GPLHSKAYAIADVLRVSIYLIV+ FH+EM+NSAKSGVLEKDWIT EKPPFGTRELLLQKLHIFLDF
Subjt:  TNIQSSHDLFGPASIKWATSSIGRVDASVGKKKSGPLHSKAYAIADVLRVSIYLIVSTFHSEMLNSAKSGVLEKDWITGEKPPFGTRELLLQKLHIFLDF

Query:  QA
        QA
Subjt:  QA

XP_008439582.1 PREDICTED: uncharacterized protein LOC103484335 [Cucumis melo]

3.6e-245

88.42

Show/hide

Query:  PISPFCFIAHWVPYFLTFHLSQLLFSASLSLLASPQLERPAAPLELAFGLVRFLVVSGGDNASSTSASKDFRRRAMVSFYLVLFVVATAVSGSLAAVSIC
        P +PF  +      FLTFHLSQLLFS+SLSLLASPQLERPAAPLEL FGLVRFLVVSGGDNASS SA KDFRRRAM SFYL+LFVVATAVSGSLAAVSIC
Subjt:  PISPFCFIAHWVPYFLTFHLSQLLFSASLSLLASPQLERPAAPLELAFGLVRFLVVSGGDNASSTSASKDFRRRAMVSFYLVLFVVATAVSGSLAAVSIC

Query:  WGKSDGLRSAWLTGLSMGLIYGSFYVYKKRWVLTFPIIQLETGARSAPFFSFKMGFPSATTLASKLSAAAFLFSVLLMVLFPDQLKRNVTVRKFIANQAI
        WGKSDGLRSAW TGL MGLIYGSFYVYKKRWVL FPIIQ        PFFSFKMGFPSATTLASKLSAA FLFS +LMVL PDQ K+NVTVRKFIANQ I
Subjt:  WGKSDGLRSAWLTGLSMGLIYGSFYVYKKRWVLTFPIIQLETGARSAPFFSFKMGFPSATTLASKLSAAAFLFSVLLMVLFPDQLKRNVTVRKFIANQAI

Query:  IFVGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEYLFAALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLK
        +F+GSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSE+LFAALEDSNSGSLLQYLAFLDLCMVCE NVDIWRRAAFFEETG+TYKRVISISL+
Subjt:  IFVGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEYLFAALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLK

Query:  PLEQFALNLGEGLEGAVDRTWQLSKQLLPPKDSHFDLKQLETLKNFQLYAWCARTVSTLTARSHSEDRFGVAQLSGSNASVMSTLLSCLLAVEVLMGKKT
        PLEQFALNLG+GLEGAVD T QLS+QLLPP DSHFD+KQLE LKNFQLYAWCARTVSTLTARSH EDRFGVAQLSGSNA+VMSTLLSCLLAVEVLMGKKT
Subjt:  PLEQFALNLGEGLEGAVDRTWQLSKQLLPPKDSHFDLKQLETLKNFQLYAWCARTVSTLTARSHSEDRFGVAQLSGSNASVMSTLLSCLLAVEVLMGKKT

Query:  NIQSSHDLFGPASIKWATSSIGRVDASVGKKKSGPLHSKAYAIADVLRVSIYLIVSTFHSEMLNSAKSGVLEKDWITGEKPPFGTRELLLQKLHIFLDFQ
        NIQSSHDLFGPA IKWAT+SI RVDASVGKKKSGPLH KAYAIADVLRVSIYLIV+ FH+EMLNSAKSGVLEKDWIT EKPPFGTRELLLQKLHIFLDFQ
Subjt:  NIQSSHDLFGPASIKWATSSIGRVDASVGKKKSGPLHSKAYAIADVLRVSIYLIVSTFHSEMLNSAKSGVLEKDWITGEKPPFGTRELLLQKLHIFLDFQ

Query:  A
        A
Subjt:  A

XP_022146635.1 uncharacterized protein LOC111015789 [Momordica charantia]

5.1e-247

89.22

Show/hide

Query:  PISPFCFIAHWVPYFLTFHLSQLLFSASLSLLASPQLERPAAPLELAFGLVRFLVVSGGDNASSTSASKDFRRRAMVSFYLVLFVVATAVSGSLAAVSIC
        P  PF  +      FLTFHLSQLLFS+SLSLLASPQLERPAAPLELAFGLVRFLV++GG  ASS SASKDFRRRA VS YLVLFV+ATAVSGSLAAVSIC
Subjt:  PISPFCFIAHWVPYFLTFHLSQLLFSASLSLLASPQLERPAAPLELAFGLVRFLVVSGGDNASSTSASKDFRRRAMVSFYLVLFVVATAVSGSLAAVSIC

Query:  WGKSDGLRSAWLTGLSMGLIYGSFYVYKKRWVLTFPIIQLETGARSAPFFSFKMGFPSATTLASKLSAAAFLFSVLLMVLFPDQLKRNVTVRKFIANQAI
        WGKSDGLRSAWLTGLSMGLIYGSFYVYKK WVLTFPIIQ        PFFSFKMG PSATTLASKLSAAAF+FS +LMVL PDQ KRNVTVRKF+ANQAI
Subjt:  WGKSDGLRSAWLTGLSMGLIYGSFYVYKKRWVLTFPIIQLETGARSAPFFSFKMGFPSATTLASKLSAAAFLFSVLLMVLFPDQLKRNVTVRKFIANQAI

Query:  IFVGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEYLFAALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLK
        +F+GSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEYLFAALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEE+GETYKRVISISLK
Subjt:  IFVGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEYLFAALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLK

Query:  PLEQFALNLGEGLEGAVDRTWQLSKQLLPPKDSHFDLKQLETLKNFQLYAWCARTVSTLTARSHSEDRFGVAQLSGSNASVMSTLLSCLLAVEVLMGKKT
        PLEQFALNLGEGL+G+ D T QLSKQLLPPKDSHFD+KQLETLKNFQLYAWCARTVSTLTARSHSEDRFGVAQLSGSNASVMSTLLSCLLAVEVLMGKKT
Subjt:  PLEQFALNLGEGLEGAVDRTWQLSKQLLPPKDSHFDLKQLETLKNFQLYAWCARTVSTLTARSHSEDRFGVAQLSGSNASVMSTLLSCLLAVEVLMGKKT

Query:  NIQSSHDLFGPASIKWATSSIGRVDASVGKKKSGPLHSKAYAIADVLRVSIYLIVSTFHSEMLNSAKSGVLEKDWITGEKPPFGTRELLLQKLHIFLDFQ
        NIQS HDL GPASIKWATSSI RVDASVGKKKSGPLHSK YAIADVLR SIYLIVS FH+EML+SAKSGVLEKDWITGEKP FGTRELLLQKLHIFLDFQ
Subjt:  NIQSSHDLFGPASIKWATSSIGRVDASVGKKKSGPLHSKAYAIADVLRVSIYLIVSTFHSEMLNSAKSGVLEKDWITGEKPPFGTRELLLQKLHIFLDFQ

Query:  A
        A
Subjt:  A

XP_038882942.1 uncharacterized protein LOC120074035 [Benincasa hispida]

4.8e-245

89.26

Show/hide

Query:  PISPFCFIAHWVPYFLTFHLSQLLFSASLSLLASPQLERPAAPLELAFGLVRFLVVSGGDNAS--STSASKDFRRRAMVSFYLVLFVVATAVSGSLAAVS
        P  PF  +      FLTFHLSQLLFSASLSLLASPQLERPAAPLELAFGLVRFLVVSGGDN S  S SAS DFRRRAMVSF LVLFVVATAVSGSLAAVS
Subjt:  PISPFCFIAHWVPYFLTFHLSQLLFSASLSLLASPQLERPAAPLELAFGLVRFLVVSGGDNAS--STSASKDFRRRAMVSFYLVLFVVATAVSGSLAAVS

Query:  ICWGKSDGLRSAWLTGLSMGLIYGSFYVYKKRWVLTFPIIQLETGARSAPFFSFKMGFPSATTLASKLSAAAFLFSVLLMVLFPDQLKRNVTVRKFIANQ
        ICWGKSDGLRSAW TGL MGLIYG FYVYKKRWVLTFPIIQ        PFFSFKMGFPSATTLASKLSAA FLFS +L++L PDQLKRNVTVRKFIANQ
Subjt:  ICWGKSDGLRSAWLTGLSMGLIYGSFYVYKKRWVLTFPIIQLETGARSAPFFSFKMGFPSATTLASKLSAAAFLFSVLLMVLFPDQLKRNVTVRKFIANQ

Query:  AIIFVGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEYLFAALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISIS
        AI+F+GSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEYLFAALEDSNSGSLLQYLAFLDLCMVCE NVDIWRRAAFFEETGETYKRVISIS
Subjt:  AIIFVGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEYLFAALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISIS

Query:  LKPLEQFALNLGEGLEGAVDRTWQLSKQLLPPKDSHFDLKQLETLKNFQLYAWCARTVSTLTARSHSEDRFGVAQLSGSNASVMSTLLSCLLAVEVLMGK
        L+PLEQFALNLGEGLEGAVD T QLSKQLLPPKDSH D+KQLETLKNFQLYAWCARTVSTLTARSH EDRFGVAQLSGSNA+VMSTLLSCLLAVEVLMGK
Subjt:  LKPLEQFALNLGEGLEGAVDRTWQLSKQLLPPKDSHFDLKQLETLKNFQLYAWCARTVSTLTARSHSEDRFGVAQLSGSNASVMSTLLSCLLAVEVLMGK

Query:  KTNIQSSHDLFGPASIKWATSSIGRVDASVGKKKSGPLHSKAYAIADVLRVSIYLIVSTFHSEMLNSAKSGVLEKDWITGEKPPFGTRELLLQKLHIFLD
        K NIQSSH+LFGPA IKWATSSI RVD SVGKKKSGPLHSKAYA ADVLR SIYLIVS FH+EMLNSAKSGVLEKDWIT EKPPFGTRELLLQKLHIFLD
Subjt:  KTNIQSSHDLFGPASIKWATSSIGRVDASVGKKKSGPLHSKAYAIADVLRVSIYLIVSTFHSEMLNSAKSGVLEKDWITGEKPPFGTRELLLQKLHIFLD

Query:  FQA
        FQA
Subjt:  FQA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KM37 Uncharacterized protein

2.2e-243

87.25

Show/hide

Query:  EPISPFCFIAHWVPYFLTFHLSQLLFSASLSLLASPQLERPAAPLELAFGLVRFLVVSGGDNASSTSASKDFRRRAMVSFYLVLFVVATAVSGSLAAVSI
        +P +PF  +      FLTFHLSQLLFS+SLSLLASPQLERPAAPLEL FGLVRFLVVSGGDNASS SA KDFRRRAMVSFYLVLFVVATAVSGSLAAVSI
Subjt:  EPISPFCFIAHWVPYFLTFHLSQLLFSASLSLLASPQLERPAAPLELAFGLVRFLVVSGGDNASSTSASKDFRRRAMVSFYLVLFVVATAVSGSLAAVSI

Query:  CWGKSDGLRSAWLTGLSMGLIYGSFYVYKKRWVLTFPIIQLETGARSAPFFSFKMGFPSATTLASKLSAAAFLFSVLLMVLFPDQLKRNVTVRKFIANQA
        CWGKSDGLRSAW  GL MGLIYG FYVYKKRWVL FPIIQ        PFFSFKMGFPSATTLASKLSAA FLFS +LMVL PDQ K+NVTVRKFI NQ 
Subjt:  CWGKSDGLRSAWLTGLSMGLIYGSFYVYKKRWVLTFPIIQLETGARSAPFFSFKMGFPSATTLASKLSAAAFLFSVLLMVLFPDQLKRNVTVRKFIANQA

Query:  IIFVGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEYLFAALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISL
        I+F+GSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSE+LFAALEDSNSGSLLQYLAFLDLCMVCE NVDIWRRAAFFEETG+TYKRVISISL
Subjt:  IIFVGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEYLFAALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISL

Query:  KPLEQFALNLGEGLEGAVDRTWQLSKQLLPPKDSHFDLKQLETLKNFQLYAWCARTVSTLTARSHSEDRFGVAQLSGSNASVMSTLLSCLLAVEVLMGKK
        +PLEQFALNLG+GLEGA+D T QLS+QLLPP DSHFD+KQL+ LKNFQLYAWCARTVSTLTARSH EDRFGVAQLSGSNA+VMSTLLSCLLAVEVLMGKK
Subjt:  KPLEQFALNLGEGLEGAVDRTWQLSKQLLPPKDSHFDLKQLETLKNFQLYAWCARTVSTLTARSHSEDRFGVAQLSGSNASVMSTLLSCLLAVEVLMGKK

Query:  TNIQSSHDLFGPASIKWATSSIGRVDASVGKKKSGPLHSKAYAIADVLRVSIYLIVSTFHSEMLNSAKSGVLEKDWITGEKPPFGTRELLLQKLHIFLDF
        TN+QSSH+LFGPA IKWATSSI RVDASVGKKK+GPLHSKAYAIADVLRVSIYLIV+ FH+EM+NSAKSGVLEKDWIT EKPPFGTRELLLQKLHIFLDF
Subjt:  TNIQSSHDLFGPASIKWATSSIGRVDASVGKKKSGPLHSKAYAIADVLRVSIYLIVSTFHSEMLNSAKSGVLEKDWITGEKPPFGTRELLLQKLHIFLDF

Query:  QA
        QA
Subjt:  QA

A0A1S3AZ36 uncharacterized protein LOC103484335

1.8e-245

88.42

Show/hide

Query:  PISPFCFIAHWVPYFLTFHLSQLLFSASLSLLASPQLERPAAPLELAFGLVRFLVVSGGDNASSTSASKDFRRRAMVSFYLVLFVVATAVSGSLAAVSIC
        P +PF  +      FLTFHLSQLLFS+SLSLLASPQLERPAAPLEL FGLVRFLVVSGGDNASS SA KDFRRRAM SFYL+LFVVATAVSGSLAAVSIC
Subjt:  PISPFCFIAHWVPYFLTFHLSQLLFSASLSLLASPQLERPAAPLELAFGLVRFLVVSGGDNASSTSASKDFRRRAMVSFYLVLFVVATAVSGSLAAVSIC

Query:  WGKSDGLRSAWLTGLSMGLIYGSFYVYKKRWVLTFPIIQLETGARSAPFFSFKMGFPSATTLASKLSAAAFLFSVLLMVLFPDQLKRNVTVRKFIANQAI
        WGKSDGLRSAW TGL MGLIYGSFYVYKKRWVL FPIIQ        PFFSFKMGFPSATTLASKLSAA FLFS +LMVL PDQ K+NVTVRKFIANQ I
Subjt:  WGKSDGLRSAWLTGLSMGLIYGSFYVYKKRWVLTFPIIQLETGARSAPFFSFKMGFPSATTLASKLSAAAFLFSVLLMVLFPDQLKRNVTVRKFIANQAI

Query:  IFVGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEYLFAALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLK
        +F+GSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSE+LFAALEDSNSGSLLQYLAFLDLCMVCE NVDIWRRAAFFEETG+TYKRVISISL+
Subjt:  IFVGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEYLFAALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLK

Query:  PLEQFALNLGEGLEGAVDRTWQLSKQLLPPKDSHFDLKQLETLKNFQLYAWCARTVSTLTARSHSEDRFGVAQLSGSNASVMSTLLSCLLAVEVLMGKKT
        PLEQFALNLG+GLEGAVD T QLS+QLLPP DSHFD+KQLE LKNFQLYAWCARTVSTLTARSH EDRFGVAQLSGSNA+VMSTLLSCLLAVEVLMGKKT
Subjt:  PLEQFALNLGEGLEGAVDRTWQLSKQLLPPKDSHFDLKQLETLKNFQLYAWCARTVSTLTARSHSEDRFGVAQLSGSNASVMSTLLSCLLAVEVLMGKKT

Query:  NIQSSHDLFGPASIKWATSSIGRVDASVGKKKSGPLHSKAYAIADVLRVSIYLIVSTFHSEMLNSAKSGVLEKDWITGEKPPFGTRELLLQKLHIFLDFQ
        NIQSSHDLFGPA IKWAT+SI RVDASVGKKKSGPLH KAYAIADVLRVSIYLIV+ FH+EMLNSAKSGVLEKDWIT EKPPFGTRELLLQKLHIFLDFQ
Subjt:  NIQSSHDLFGPASIKWATSSIGRVDASVGKKKSGPLHSKAYAIADVLRVSIYLIVSTFHSEMLNSAKSGVLEKDWITGEKPPFGTRELLLQKLHIFLDFQ

Query:  A
        A
Subjt:  A

A0A5D3CN15 Ndc1_Nup domain-containing protein

4.6e-246

88.62

Show/hide

Query:  PISPFCFIAHWVPYFLTFHLSQLLFSASLSLLASPQLERPAAPLELAFGLVRFLVVSGGDNASSTSASKDFRRRAMVSFYLVLFVVATAVSGSLAAVSIC
        P +PF  +      FLTFHLSQLLFS+SLSLLASPQLERPAAPLEL FGLVRFLVVSGGDNASS SA KDFRRRAMVSFYL+LFVVATAVSGSLAAVSIC
Subjt:  PISPFCFIAHWVPYFLTFHLSQLLFSASLSLLASPQLERPAAPLELAFGLVRFLVVSGGDNASSTSASKDFRRRAMVSFYLVLFVVATAVSGSLAAVSIC

Query:  WGKSDGLRSAWLTGLSMGLIYGSFYVYKKRWVLTFPIIQLETGARSAPFFSFKMGFPSATTLASKLSAAAFLFSVLLMVLFPDQLKRNVTVRKFIANQAI
        WGKSDGLRSAW TGL MGLIYGSFYVYKKRWVL FPIIQ        PFFSFKMGFPSATTLASKLSAA FLFS +LMVL PDQ K+NVTVRKFIANQ I
Subjt:  WGKSDGLRSAWLTGLSMGLIYGSFYVYKKRWVLTFPIIQLETGARSAPFFSFKMGFPSATTLASKLSAAAFLFSVLLMVLFPDQLKRNVTVRKFIANQAI

Query:  IFVGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEYLFAALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLK
        +F+GSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSE+LFAALEDSNSGSLLQYLAFLDLCMVCE NVDIWRRAAFFEETG+TYKRVISISL+
Subjt:  IFVGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEYLFAALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLK

Query:  PLEQFALNLGEGLEGAVDRTWQLSKQLLPPKDSHFDLKQLETLKNFQLYAWCARTVSTLTARSHSEDRFGVAQLSGSNASVMSTLLSCLLAVEVLMGKKT
        PLEQFALNLG+GLEGAVD T QLS+QLLPP D HFD+KQLE LKNFQLYAWCARTVSTLTARSH EDRFGVAQLSGSNA+VMSTLLSCLLAVEVLMGKKT
Subjt:  PLEQFALNLGEGLEGAVDRTWQLSKQLLPPKDSHFDLKQLETLKNFQLYAWCARTVSTLTARSHSEDRFGVAQLSGSNASVMSTLLSCLLAVEVLMGKKT

Query:  NIQSSHDLFGPASIKWATSSIGRVDASVGKKKSGPLHSKAYAIADVLRVSIYLIVSTFHSEMLNSAKSGVLEKDWITGEKPPFGTRELLLQKLHIFLDFQ
        NIQSSHDLFGPA IKWAT+SI RVDASVGKKKSGPLHSKAYAIADVLRVSIYLIV+ FH+EMLNSAKSGVLEKDWIT EKPPFGTRELLLQKLHIFLDFQ
Subjt:  NIQSSHDLFGPASIKWATSSIGRVDASVGKKKSGPLHSKAYAIADVLRVSIYLIVSTFHSEMLNSAKSGVLEKDWITGEKPPFGTRELLLQKLHIFLDFQ

Query:  A
        A
Subjt:  A

A0A6J1CXT0 uncharacterized protein LOC111015789

2.5e-247

89.22

Show/hide

Query:  PISPFCFIAHWVPYFLTFHLSQLLFSASLSLLASPQLERPAAPLELAFGLVRFLVVSGGDNASSTSASKDFRRRAMVSFYLVLFVVATAVSGSLAAVSIC
        P  PF  +      FLTFHLSQLLFS+SLSLLASPQLERPAAPLELAFGLVRFLV++GG  ASS SASKDFRRRA VS YLVLFV+ATAVSGSLAAVSIC
Subjt:  PISPFCFIAHWVPYFLTFHLSQLLFSASLSLLASPQLERPAAPLELAFGLVRFLVVSGGDNASSTSASKDFRRRAMVSFYLVLFVVATAVSGSLAAVSIC

Query:  WGKSDGLRSAWLTGLSMGLIYGSFYVYKKRWVLTFPIIQLETGARSAPFFSFKMGFPSATTLASKLSAAAFLFSVLLMVLFPDQLKRNVTVRKFIANQAI
        WGKSDGLRSAWLTGLSMGLIYGSFYVYKK WVLTFPIIQ        PFFSFKMG PSATTLASKLSAAAF+FS +LMVL PDQ KRNVTVRKF+ANQAI
Subjt:  WGKSDGLRSAWLTGLSMGLIYGSFYVYKKRWVLTFPIIQLETGARSAPFFSFKMGFPSATTLASKLSAAAFLFSVLLMVLFPDQLKRNVTVRKFIANQAI

Query:  IFVGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEYLFAALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLK
        +F+GSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEYLFAALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEE+GETYKRVISISLK
Subjt:  IFVGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEYLFAALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLK

Query:  PLEQFALNLGEGLEGAVDRTWQLSKQLLPPKDSHFDLKQLETLKNFQLYAWCARTVSTLTARSHSEDRFGVAQLSGSNASVMSTLLSCLLAVEVLMGKKT
        PLEQFALNLGEGL+G+ D T QLSKQLLPPKDSHFD+KQLETLKNFQLYAWCARTVSTLTARSHSEDRFGVAQLSGSNASVMSTLLSCLLAVEVLMGKKT
Subjt:  PLEQFALNLGEGLEGAVDRTWQLSKQLLPPKDSHFDLKQLETLKNFQLYAWCARTVSTLTARSHSEDRFGVAQLSGSNASVMSTLLSCLLAVEVLMGKKT

Query:  NIQSSHDLFGPASIKWATSSIGRVDASVGKKKSGPLHSKAYAIADVLRVSIYLIVSTFHSEMLNSAKSGVLEKDWITGEKPPFGTRELLLQKLHIFLDFQ
        NIQS HDL GPASIKWATSSI RVDASVGKKKSGPLHSK YAIADVLR SIYLIVS FH+EML+SAKSGVLEKDWITGEKP FGTRELLLQKLHIFLDFQ
Subjt:  NIQSSHDLFGPASIKWATSSIGRVDASVGKKKSGPLHSKAYAIADVLRVSIYLIVSTFHSEMLNSAKSGVLEKDWITGEKPPFGTRELLLQKLHIFLDFQ

Query:  A
        A
Subjt:  A

A0A6J1IIC5 uncharacterized protein LOC111477752

1.9e-239

85.14

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Query:  SPFSDPQKWLSRIAFWEPISPFCFIAHWVPYFLTFHLSQLLFSASLSLLASPQLERPAAPLELAFGLVRFLVVSGGDNASSTSASKDFRRRAMVSFYLVL
        SP S      S      P +PF  +      FLTFHLSQLLFSASLSLLASPQLERPAAPLELAF LVRFLVVSGGDNASS SASKDF RRAMVSFYLVL
Subjt:  SPFSDPQKWLSRIAFWEPISPFCFIAHWVPYFLTFHLSQLLFSASLSLLASPQLERPAAPLELAFGLVRFLVVSGGDNASSTSASKDFRRRAMVSFYLVL

Query:  FVVATAVSGSLAAVSICWGKSDGLRSAWLTGLSMGLIYGSFYVYKKRWVLTFPIIQLETGARSAPFFSFKMGFPSATTLASKLSAAAFLFSVLLMVLFPD
        FVVATAVSGSLAAVS CWGK+DGL SAW TGLSMGLIYG FYVYKKRWVLTFPIIQ        PFFSFKMGFPSAT LASKLSAAAFLFS +LM L PD
Subjt:  FVVATAVSGSLAAVSICWGKSDGLRSAWLTGLSMGLIYGSFYVYKKRWVLTFPIIQLETGARSAPFFSFKMGFPSATTLASKLSAAAFLFSVLLMVLFPD

Query:  QLKRNVTVRKFIANQAIIFVGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEYLFAALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAF
         LK N TV KFIANQAI+F+GSFAVFLSWELTHHLH+VLHTKRFAFAPPKGSAAAETNPSEYLFAAL+DSN GSLLQYLAFLDLCMVCE NVDIWRRAAF
Subjt:  QLKRNVTVRKFIANQAIIFVGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEYLFAALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAF

Query:  FEETGETYKRVISISLKPLEQFALNLGEGLEGAVDRTWQLSKQLLPPKDSHFDLKQLETLKNFQLYAWCARTVSTLTARSHSEDRFGVAQLSGSNASVMS
        FEE+GETYKRV+SISL+PLEQFALNLGEGLEGAVD T QLSKQLLPPKDSHFDLKQLETLKNFQ+YAWCAR VS LTARSH ED+FGVAQLSGSNA+VMS
Subjt:  FEETGETYKRVISISLKPLEQFALNLGEGLEGAVDRTWQLSKQLLPPKDSHFDLKQLETLKNFQLYAWCARTVSTLTARSHSEDRFGVAQLSGSNASVMS

Query:  TLLSCLLAVEVLMGKKTNIQSSHDLFGPASIKWATSSIGRVDASVGKKKSGPLHSKAYAIADVLRVSIYLIVSTFHSEMLNSAKSGVLEKDWITGEKPPF
        TLLSCLLAVEVLMGKKT IQSSHDLFGPA IKWATSSI RVD+SVGKKKSGPLHS AYAIADVLR SIYLIVS FH EMLNSAKSGVLEKDWIT EK PF
Subjt:  TLLSCLLAVEVLMGKKTNIQSSHDLFGPASIKWATSSIGRVDASVGKKKSGPLHSKAYAIADVLRVSIYLIVSTFHSEMLNSAKSGVLEKDWITGEKPPF

Query:  GTRELLLQKLHIFLDFQA
        GTRELLLQKLHIFLDF+A
Subjt:  GTRELLLQKLHIFLDFQA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G73240.1 CONTAINS InterPro DOMAIN/s: Nucleoporin protein Ndc1-Nup (InterPro:IPR019049); Has 36 Blast hits to 36 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

1.1e-135

53.88

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Query:  FLTFHLSQLLFSASLSLLASPQLERPAAPLELAFGLVRFLVVSGGDNASSTSASKDFRRRAMVSFYLVLFVVATAVSGSLAAVSICWGKSD--GLRSAWL
        FL FH SQLLFS SL+LL+SP  + P +PL+ A GL R L            +  +FRRRA VS  +VLFV AT+++G  ++   C        +     
Subjt:  FLTFHLSQLLFSASLSLLASPQLERPAAPLELAFGLVRFLVVSGGDNASSTSASKDFRRRAMVSFYLVLFVVATAVSGSLAAVSICWGKSD--GLRSAWL

Query:  TGLSMGLIYGSFYVYKKRWVLTFPIIQLETGARSAPFFSFKMGFPSATTLASKLSAAAFLFSVLLMVLFPDQLKRNVTVRKFIANQAIIFVGSFAVFLSW
         GL  GL+Y   +V K+RWVL FPIIQ        PFFSFK+G PSA T A KLS   ++ S ++++   D     V+V KF+  Q + + GSF + LSW
Subjt:  TGLSMGLIYGSFYVYKKRWVLTFPIIQLETGARSAPFFSFKMGFPSATTLASKLSAAAFLFSVLLMVLFPDQLKRNVTVRKFIANQAIIFVGSFAVFLSW

Query:  ELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEYLFAALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALNLGEG
        E+THH+H+VLHTKRF+FAPPKGSAAAETNPSE L AALE S  GSL Q LA+LDL MV +NNVD WRRAAFFEE+ ETYKRVI++ L+PLE+ A  L  G
Subjt:  ELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEYLFAALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALNLGEG

Query:  LEGA-VDRTWQLSKQLLPPKDSHFDLKQLETLKNFQLYAWCARTVSTLTARSHSEDRFGVAQLSGSNASVMSTLLSCLLAVEVLMGKKTNIQSSHDLFGP
        L+    ++ +Q   Q  PP +S  D K  E+LK+FQLYAWCA+T ++LT+ SH EDR GVAQLSG NA V+STLLS LLA+E  MGKKTN+QS   L GP
Subjt:  LEGA-VDRTWQLSKQLLPPKDSHFDLKQLETLKNFQLYAWCARTVSTLTARSHSEDRFGVAQLSGSNASVMSTLLSCLLAVEVLMGKKTNIQSSHDLFGP

Query:  ASIKWATSSIGRVDASVGKKKSGPLHSKAYAIADVLRVSIYLIVSTFHSEMLNSAKSGVLEKDWITGEKPPFGTRELLLQKLHIFLDFQA
        ASIKWATSS+ R D    K+  G +++ AYA  DVLR+S+Y I+STF  EMLNS ++G+L +DWI  +KPPFGT ++LLQKL +FL+FQA
Subjt:  ASIKWATSSIGRVDASVGKKKSGPLHSKAYAIADVLRVSIYLIVSTFHSEMLNSAKSGVLEKDWITGEKPPFGTRELLLQKLHIFLDFQA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCCTTCGTCTTCTCCGTTTTCGGACCCCCAGAAATGGTTGTCAAGAATCGCTTTCTGGGAACCCATCAGCCCCTTTTGCTTCATTGCTCACTGGGTTCCTTACTTTCT
TACATTTCATCTCTCTCAACTCCTCTTCTCTGCTTCGCTCTCTCTCCTTGCTTCGCCCCAGCTCGAACGACCTGCAGCGCCGCTCGAGCTCGCCTTTGGGCTTGTTCGGT
TTCTTGTAGTTTCAGGCGGTGACAATGCCTCATCGACGTCGGCTTCGAAGGATTTTCGCCGTCGGGCTATGGTTTCGTTCTATTTGGTCCTGTTTGTAGTGGCTACTGCG
GTTTCGGGTTCCCTGGCGGCGGTTTCTATATGTTGGGGGAAATCAGATGGTCTTAGAAGTGCGTGGCTTACGGGTCTTTCGATGGGTCTGATTTATGGCTCTTTCTATGT
TTACAAGAAAAGATGGGTTCTAACGTTCCCAATCATACAGCTAGAGACTGGTGCTAGATCGGCCCCCTTTTTCAGCTTCAAGATGGGTTTCCCCTCAGCTACCACGTTGG
CTTCCAAACTTTCTGCTGCAGCTTTCCTATTTTCAGTATTATTAATGGTGCTTTTTCCGGATCAACTTAAGAGAAATGTTACAGTCAGGAAGTTCATAGCAAACCAGGCC
ATTATTTTCGTTGGAAGCTTTGCAGTATTTCTTTCTTGGGAATTGACTCACCACTTGCATCGGGTCCTACATACCAAGAGGTTCGCTTTTGCACCTCCAAAGGGATCTGC
TGCTGCAGAAACAAATCCTAGTGAGTACCTGTTTGCAGCTTTGGAGGACAGCAACTCAGGGTCTCTTTTGCAATATCTTGCATTTCTTGATCTCTGCATGGTTTGTGAGA
ATAATGTTGATATATGGAGGAGAGCTGCATTTTTTGAAGAAACAGGTGAGACGTATAAGCGAGTTATATCCATATCCTTGAAGCCTCTGGAGCAATTTGCACTGAACTTG
GGTGAAGGTTTGGAAGGTGCTGTGGACAGAACCTGGCAACTATCCAAACAACTATTACCGCCAAAGGACTCTCACTTCGACCTAAAACAATTGGAAACTCTTAAAAACTT
TCAGTTGTATGCATGGTGTGCCCGAACGGTTTCTACATTGACTGCTCGCTCACATTCGGAAGATCGATTCGGGGTTGCCCAACTCTCTGGTAGTAATGCTTCTGTTATGT
CGACACTGTTATCTTGCCTGCTTGCTGTTGAGGTGTTGATGGGGAAGAAGACTAATATACAATCTTCACACGACTTATTCGGTCCGGCTAGTATTAAATGGGCAACGTCA
AGTATTGGAAGAGTAGATGCTTCGGTTGGTAAAAAGAAAAGCGGTCCGCTGCATTCGAAGGCATATGCAATTGCAGATGTATTGAGGGTGTCGATCTATCTCATTGTTTC
TACATTCCATAGCGAGATGCTGAATAGTGCCAAGTCTGGTGTTCTTGAGAAAGATTGGATCACTGGTGAAAAGCCCCCTTTCGGTACTCGCGAGTTGCTTCTGCAGAAAT
TGCATATTTTCTTGGATTTTCAAGCTTAG

mRNA sequence

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Protein sequence

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MPSSSPFSDPQKWLSRIAFWEPISPFCFIAHWVPYFLTFHLSQLLFSASLSLLASPQLERPAAPLELAFGLVRFLVVSGGDNASSTSASKDFRRRAMVSFYLVLFVVATA
VSGSLAAVSICWGKSDGLRSAWLTGLSMGLIYGSFYVYKKRWVLTFPIIQLETGARSAPFFSFKMGFPSATTLASKLSAAAFLFSVLLMVLFPDQLKRNVTVRKFIANQA
IIFVGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEYLFAALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALNL
GEGLEGAVDRTWQLSKQLLPPKDSHFDLKQLETLKNFQLYAWCARTVSTLTARSHSEDRFGVAQLSGSNASVMSTLLSCLLAVEVLMGKKTNIQSSHDLFGPASIKWATS
SIGRVDASVGKKKSGPLHSKAYAIADVLRVSIYLIVSTFHSEMLNSAKSGVLEKDWITGEKPPFGTRELLLQKLHIFLDFQA

Lag0014049 (gene) of Sponge gourd (AG-4) v1 genome