; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0014052 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014052
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionF-box protein SKIP19-like
Genome locationchr1:54810236..54811994
RNA-Seq ExpressionLag0014052
SyntenyLag0014052
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001611 - Leucine-rich repeat
IPR001810 - F-box domain
IPR006553 - Leucine-rich repeat, cysteine-containing subtype
IPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581459.1 F-box protein SKIP19, partial [Cucurbita argyrosperma subsp. sororia]1.2e-10266.03Show/hide
Query:  MESNSVIQS-EAEARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFG
        MESNS   S   EARNWLELP +V S ILLKLG ++ILT+AQ+VCSSWRKIC+DPLMWR +DM   G+  DM YDLE MC+ AVDRSCGQL+ INIE+FG
Subjt:  MESNSVIQS-EAEARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFG

Query:  TDKLLQYITQSSNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVSDKEVLAIAETMPKLQHL
        TD LLQYITQSSN+LR+LR+  C  ISDEGLIKAVSKLPLLE LEI   SF+VETL+ +GQ  PLLKSLKLN+QF   R    DK  LAIAE MP L+HL
Subjt:  TDKLLQYITQSSNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVSDKEVLAIAETMPKLQHL

Query:  QIFGNGLTDEGLQAILDGCPDLESLDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEFSTEIINFRYDSED---FVSGFSG----YDHYHYYGFTE
        QIFGN LT+ GL+AILDGCPDLESLDLRQCFNLN AG+LG KC+EKIK L LP DPTD YE+STEI+ +  D E+   +  G S      D   YY F+ 
Subjt:  QIFGNGLTDEGLQAILDGCPDLESLDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEFSTEIINFRYDSED---FVSGFSG----YDHYHYYGFTE

Query:  DSDFSDYGDSWY
         SDFSDY D ++
Subjt:  DSDFSDYGDSWY

KAG7034751.1 Protein BREAST CANCER SUSCEPTIBILITY 1-like protein [Cucurbita argyrosperma subsp. argyrosperma]3.1e-10367.31Show/hide
Query:  MESNSVIQS-EAEARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFG
        MESNS   S   EARNWLELP +V S ILLKLG ++ILT+AQ+VCSSWRKIC+DPLMWR +DM   G+  DM YDLE MC+ AVDRSCGQL+ INIE+FG
Subjt:  MESNSVIQS-EAEARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFG

Query:  TDKLLQYITQSSNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVSDKEVLAIAETMPKLQHL
        TD LLQYITQSSNQLR+LR+  C  ISDEGLIKAVSKLPLLE LEI   SF+VETL+ +GQ  PLLKSLKLN+QF   R    DK  LAIAE MP L+HL
Subjt:  TDKLLQYITQSSNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVSDKEVLAIAETMPKLQHL

Query:  QIFGNGLTDEGLQAILDGCPDLESLDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEFSTEIINFRYDSED---FVSGFSG----YDHYHYYGFTE
        QIFGN LT+ GL+AILDGCPDLESLDLRQCFNLN AG+LG KC+EKIK L LP DPTD YEFSTEI+ +  D E+   +  G S      D   YY F+ 
Subjt:  QIFGNGLTDEGLQAILDGCPDLESLDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEFSTEIINFRYDSED---FVSGFSG----YDHYHYYGFTE

Query:  DSDFSDYGD
         SDFSDY D
Subjt:  DSDFSDYGD

XP_022925897.1 F-box protein SKIP19-like isoform X1 [Cucurbita moschata]2.0e-10266.35Show/hide
Query:  MESNSVIQS-EAEARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFG
        MESNS   S   EARNWLELP +V S ILLKLG ++ILT+AQ+VCSSWRKIC+DPLMWR +DM   G+  DM YDLE MC+ AVDRSCGQL+ I IE+FG
Subjt:  MESNSVIQS-EAEARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFG

Query:  TDKLLQYITQSSNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVSDKEVLAIAETMPKLQHL
        TD LLQYITQSSNQLR LR+  C  ISDEGLIKAVSKLPLLE LEI   SF+VETL+ +GQ  PLLKSLKLN+QF   R    DK  LAIAE MP L+HL
Subjt:  TDKLLQYITQSSNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVSDKEVLAIAETMPKLQHL

Query:  QIFGNGLTDEGLQAILDGCPDLESLDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEFSTEIINFRYDSED---FVSGFSG----YDHYHYYGFTE
        QIFGN LT+ GL+AILDGCPDLESLDLRQCFNLN AG+LG KC+EKIK L LP DPTD YEFSTEI+ +  D E+   +  G S      D   YY F+ 
Subjt:  QIFGNGLTDEGLQAILDGCPDLESLDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEFSTEIINFRYDSED---FVSGFSG----YDHYHYYGFTE

Query:  DSDFSDYGDSWY
         SDFSDY D ++
Subjt:  DSDFSDYGDSWY

XP_023543623.1 F-box protein SKIP19-like [Cucurbita pepo subsp. pepo]9.0e-10366.35Show/hide
Query:  MESNSVIQS-EAEARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFG
        MESNS   S   EARNWLELP +V S ILLKLG ++ILT+AQ+VCSSWRKIC+DPLMWR +DM   G+  DM YDLE MC+ AVDRSCGQL+ INIE+FG
Subjt:  MESNSVIQS-EAEARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFG

Query:  TDKLLQYITQSSNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVSDKEVLAIAETMPKLQHL
        TD LL YITQSSNQLR+LR+  C  ISDEGLIKAVSKLPLLE LEI   SF+VETL+ +GQ  PLLKSLKLN+QF   R    DK  LAIAE MP L+HL
Subjt:  TDKLLQYITQSSNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVSDKEVLAIAETMPKLQHL

Query:  QIFGNGLTDEGLQAILDGCPDLESLDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEFSTEIINFRYDSED---FVSGFSG----YDHYHYYGFTE
        QIFGN LT+ GL+AILDGCPDLESLDLRQCFNLN AG+LG KC+EKIK L LP DPTD YEFSTEI+ +  D E+   +  G S      D   YY F+ 
Subjt:  QIFGNGLTDEGLQAILDGCPDLESLDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEFSTEIINFRYDSED---FVSGFSG----YDHYHYYGFTE

Query:  DSDFSDYGDSWY
         SDFSDY D ++
Subjt:  DSDFSDYGDSWY

XP_038883506.1 F-box protein SKIP19-like [Benincasa hispida]8.4e-11773.77Show/hide
Query:  MESNSVIQSEAEARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFGT
        MESNSVIQSEAEARNWL+LP EVMS ILLKLGAIEILTSAQNVCSSWRKICKDPLMWR IDM N G L DM +DLE+MC+HAVDRSCGQL+DINIEYFGT
Subjt:  MESNSVIQSEAEARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFGT

Query:  DKLLQYITQSSNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVSDKEVLAIAETMPKLQHLQ
        D+LLQYITQSSNQLRRLR+A CY ISDEGL +A+S+LPLLE LEIFI SF+VETLK VG+ CPLLK LKL ++       V++KE LAIAETMPKL+HLQ
Subjt:  DKLLQYITQSSNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVSDKEVLAIAETMPKLQHLQ

Query:  IFGNGLTDEGLQAILDGCPDLESLDLRQCFNLNFAGKLGQKCAEKIKILHLPDDP-TDGYEFSTEIINF-RYDSEDFVS-GFSGYDHYHYYGFTEDSDFS
        I GNGLT+ GLQAILDGCPDLESLDLRQCF+LN  G+LG++CAE+ K+LHLP D  T+G+E + + I+F  +DSED  S  FSG DH  YY F  DSDF 
Subjt:  IFGNGLTDEGLQAILDGCPDLESLDLRQCFNLNFAGKLGQKCAEKIKILHLPDDP-TDGYEFSTEIINF-RYDSEDFVS-GFSGYDHYHYYGFTEDSDFS

Query:  DYGDS
        DY DS
Subjt:  DYGDS

TrEMBL top hitse value%identityAlignment
A0A5A7UDI0 F-box protein SKIP19-like isoform X12.6e-9563.78Show/hide
Query:  MESNSVIQS-EAEARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFG
        MESNS   S E E+RNWLELPV+V S IL KLG +EILT AQ VCSSWRKIC+DPLMWR IDM    +  DM YDLE MC+ AV RSCG+L+ INIE+FG
Subjt:  MESNSVIQS-EAEARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFG

Query:  TDKLLQYITQSSNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVSDKEVLAIAETMPKLQHL
        TD LL+YITQS NQL RLR+  C  ISDEGLI+AVSKLPLLE LE+   SFNVETL  +GQ+CP LKSLKLN+QF   R    DK  LAIA+ MP L+HL
Subjt:  TDKLLQYITQSSNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVSDKEVLAIAETMPKLQHL

Query:  QIFGNGLTDEGLQAILDGCPDLESLDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEFSTEII--NFRYDSE-DFVSGFSG----YDHYHYYGFTE
         IFGN LT+ GL+AIL GC  LESLDLRQCFNLN AG+LG KC+EKIK L LP DPTD  EF+TEII  +  YD + D+  G S      D   YY F+ 
Subjt:  QIFGNGLTDEGLQAILDGCPDLESLDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEFSTEII--NFRYDSE-DFVSGFSG----YDHYHYYGFTE

Query:  DSDFSDYGDSWY
         SDFSDY D ++
Subjt:  DSDFSDYGDSWY

A0A6J1CXS5 F-box protein SKIP19-like4.1e-10164.74Show/hide
Query:  MESNSVIQSEAEARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFGT
        MESN +  S  EARNWLELP ++ S ILLKLGAIEIL+SAQ+VCS WRKICKDPLMWR +DMHN+GE  DM YDLE MC  AVDRSCG+L+DINI+YFGT
Subjt:  MESNSVIQSEAEARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFGT

Query:  DKLLQYITQSSNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVS-DKEVLAIAETMPKLQHL
        ++LLQYITQSSNQLRRLRI  C++I+D GL +AVSKLPLLE LEI + SF  +TL+ VG+ C LLKSLKL+ Q CR RG +  D++ +AIAE MP L++L
Subjt:  DKLLQYITQSSNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVS-DKEVLAIAETMPKLQHL

Query:  QIFGNGLTDEGLQAILDGCPDLESLDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEFSTEIINFRYD---SEDFVSGFSGYDHY----HYYGFTE
        QIFG+ LTD GLQAILDGCPDLESLDLRQCFNL+  G+LG +CAE+IK L LP DPTD YEF  E   F  D    ED+ SGFS  D       YY ++ 
Subjt:  QIFGNGLTDEGLQAILDGCPDLESLDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEFSTEIINFRYD---SEDFVSGFSGYDHY----HYYGFTE

Query:  DSDFSDYGDSWY
         S+FSDY D ++
Subjt:  DSDFSDYGDSWY

A0A6J1ECV6 F-box protein SKIP19-like isoform X19.7e-10366.35Show/hide
Query:  MESNSVIQS-EAEARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFG
        MESNS   S   EARNWLELP +V S ILLKLG ++ILT+AQ+VCSSWRKIC+DPLMWR +DM   G+  DM YDLE MC+ AVDRSCGQL+ I IE+FG
Subjt:  MESNSVIQS-EAEARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFG

Query:  TDKLLQYITQSSNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVSDKEVLAIAETMPKLQHL
        TD LLQYITQSSNQLR LR+  C  ISDEGLIKAVSKLPLLE LEI   SF+VETL+ +GQ  PLLKSLKLN+QF   R    DK  LAIAE MP L+HL
Subjt:  TDKLLQYITQSSNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVSDKEVLAIAETMPKLQHL

Query:  QIFGNGLTDEGLQAILDGCPDLESLDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEFSTEIINFRYDSED---FVSGFSG----YDHYHYYGFTE
        QIFGN LT+ GL+AILDGCPDLESLDLRQCFNLN AG+LG KC+EKIK L LP DPTD YEFSTEI+ +  D E+   +  G S      D   YY F+ 
Subjt:  QIFGNGLTDEGLQAILDGCPDLESLDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEFSTEIINFRYDSED---FVSGFSG----YDHYHYYGFTE

Query:  DSDFSDYGDSWY
         SDFSDY D ++
Subjt:  DSDFSDYGDSWY

A0A6J1EGI8 F-box protein SKIP19-like isoform X22.8e-10267.1Show/hide
Query:  MESNSVIQS-EAEARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFG
        MESNS   S   EARNWLELP +V S ILLKLG ++ILT+AQ+VCSSWRKIC+DPLMWR +DM   G+  DM YDLE MC+ AVDRSCGQL+ I IE+FG
Subjt:  MESNSVIQS-EAEARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFG

Query:  TDKLLQYITQSSNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVSDKEVLAIAETMPKLQHL
        TD LLQYITQSSNQLR LR+  C  ISDEGLIKAVSKLPLLE LEI   SF+VETL+ +GQ  PLLKSLKLN+QF   R    DK  LAIAE MP L+HL
Subjt:  TDKLLQYITQSSNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVSDKEVLAIAETMPKLQHL

Query:  QIFGNGLTDEGLQAILDGCPDLESLDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEFSTEIINFRYDSED---FVSGFSG----YDHYHYYGFTE
        QIFGN LT+ GL+AILDGCPDLESLDLRQCFNLN AG+LG KC+EKIK L LP DPTD YEFSTEI+ +  D E+   +  G S      D   YY F+ 
Subjt:  QIFGNGLTDEGLQAILDGCPDLESLDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEFSTEIINFRYDSED---FVSGFSG----YDHYHYYGFTE

Query:  DSDFSDY
         SDFSDY
Subjt:  DSDFSDY

A0A6J1ILH5 F-box protein SKIP19-like3.7e-10266.78Show/hide
Query:  MESNSVIQS-EAEARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFG
        MESNS   S   EARNWLELP +V S ILLKLG ++ILT+AQ+VCSSWRKIC+DPLMWR +DM   G+  DM YDLE MC+ AVDRSCGQL+ INIE+FG
Subjt:  MESNSVIQS-EAEARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFG

Query:  TDKLLQYITQSSNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVSDKEVLAIAETMPKLQHL
        TD LLQYITQSSNQLR+LR+  C  ISDEG IKAVSKLPLLE LEI   SF+VETL+ +G   PLLKSLKLN+QF   R    DK  LAIAE MP L+HL
Subjt:  TDKLLQYITQSSNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVSDKEVLAIAETMPKLQHL

Query:  QIFGNGLTDEGLQAILDGCPDLESLDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEFSTEIINFRYDSED---FVSGFSG----YDHYHYYGFTE
        QIFGN LT+ GL+AILDGCPDLESLDLRQCFNLN AG+LG KC+EKIK L LP DPTD YEFSTEI+ +  D E+   +  G S      D   YY F+ 
Subjt:  QIFGNGLTDEGLQAILDGCPDLESLDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEFSTEIINFRYDSED---FVSGFSG----YDHYHYYGFTE

Query:  DSDFSDY
         SDFSDY
Subjt:  DSDFSDY

SwissProt top hitse value%identityAlignment
Q9M0U6 Putative F-box/LRR-repeat protein 228.9e-6145.33Show/hide
Query:  VIQSEAEARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEY--FGTDKL
        V++ E +  NW ELP +++S ILL+L  +EIL +A+ VC SWR++ KDPL+WR IDM NL  L  + Y +E  C+H VD S G L++ NI+   F T  L
Subjt:  VIQSEAEARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEY--FGTDKL

Query:  LQYITQSSNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVSDKEVLAIAETMPKLQHLQIFG
        L Y+ + S+ LRRLR+     I+  G+ +A+ KLPLLE LE+   S   E  K +GQ+CP LK+LKL   +       SD + LAIA+TMP L HLQ+  
Subjt:  LQYITQSSNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVSDKEVLAIAETMPKLQHLQIFG

Query:  NGLTDEGLQAILDGCPDLESLDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEF-------------STEIINFRYDSEDFVSGF
        NGLT+ GL AILDGCP LE LDLRQCFN+N  G L ++C E+IK    P+D  D Y +               E  N+ Y S+D   G+
Subjt:  NGLTDEGLQAILDGCPDLESLDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEF-------------STEIINFRYDSEDFVSGF

Q9M0U7 Putative F-box protein At4g054752.6e-6044.98Show/hide
Query:  QSEAEARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFGTDKLLQYI
        + + E  NW++LP E+ + ILL+L   +IL +A+ +C +WR+ICKDP MWR I   NL +     +D E MC+H VD S G L++INIE+F +D LL YI
Subjt:  QSEAEARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFGTDKLLQYI

Query:  TQSSNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVS----------DKEVLAIAETMPKLQ
           S  L+ L I++   ++++G++  + KLPLLE L IF  S  ++ LK +G +CP LK+LKLN         +S          D + LAIAE+MPKL+
Subjt:  TQSSNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVS----------DKEVLAIAETMPKLQ

Query:  HLQIFGNGLTDEGLQAILDGCPDLES-LDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEFSTEI
        HLQ+ GNGLT+ GL AILDGCP LE  LD+R+CFN+N  G L ++C ++IK L  P D T  Y +S  +
Subjt:  HLQIFGNGLTDEGLQAILDGCPDLES-LDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEFSTEI

Q9M0U9 F-box protein SKIP195.0e-8054.67Show/hide
Query:  EARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFGTDKLLQYITQSS
        E+ NW ELP E+ S IL +LGAIEIL +AQ VC SWR++CKDP MWR IDMHNLG+L DM Y+LE+MC+HAVDRS G LVDI I YFGT  LL YI   S
Subjt:  EARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFGTDKLLQYITQSS

Query:  NQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVSDKEVLAIAETMPKLQHLQIFGNGLTDEGL
        + LR LR+  C  I+D+G ++AV KLPL E LE+   SF+VE+L++VGQ C  +K+LKLNK       K +D + LAIAETMPKL+HLQ+ GNGL+D GL
Subjt:  NQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVSDKEVLAIAETMPKLQHLQIFGNGLTDEGL

Query:  QAILDGCPDLESLDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEFSTEIINFRYDSEDFVSGFSGYDHYH-YYGFTEDSDFSDY
         AILD C +LE LDLR+CFN+N  G L ++C E +K++  P+D     +  +      YD  D +   SG D +  YY F+  SDFSDY
Subjt:  QAILDGCPDLESLDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEFSTEIINFRYDSEDFVSGFSGYDHYH-YYGFTEDSDFSDY

Q9S9V8 Putative F-box/LRR-repeat protein 91.7e-5951.52Show/hide
Query:  EARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDM---HNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFGTDKLLQYIT
        E RNW ELP E+ S ILL+LGAIEIL +AQ VC SWR++C+DP MWR ID+    NL    ++ Y +E +C  AVD S G L++INI+Y      L YI 
Subjt:  EARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDM---HNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFGTDKLLQYIT

Query:  QSSNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEI-FIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVSDKEVLAIAETMPKLQHLQIFGNGLT
          S+ LRRL +  C  +   G+++A  KLPLLE L+I +  S   + LK+VGQSCP L++LKLN   C G  K  DK  LAIAETMP L+HLQ+F NGL+
Subjt:  QSSNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEI-FIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVSDKEVLAIAETMPKLQHLQIFGNGLT

Query:  DEGLQAILDGCPDLESLDLRQCFNLNFAGKL
        + GL AIL+GCP L++L L QC N+N  G +
Subjt:  DEGLQAILDGCPDLESLDLRQCFNLNFAGKL

Q9S9V9 Putative F-box/LRR-repeat protein 237.2e-7149.12Show/hide
Query:  IQSEAEARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFGTDKLLQY
        +  + + RNW ELP ++ S ILL+LGAIEIL +AQ VC  W ++CKDP MWR ID+ N  + +   YDLE MC+HAVDRS G L++I I Y+GT+ L+ Y
Subjt:  IQSEAEARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFGTDKLLQY

Query:  ITQSSNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNK-QFCRGRGKVSDKEVLAIAETMPKLQHLQIFGNG
        I   S+ L+ L +  C+ I+DEG+ KAVSK+PLLE LE+    F+ E+L+ +G+SCP LK+LKLN+           D    AIAE+MP+L+HLQ+ GNG
Subjt:  ITQSSNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNK-QFCRGRGKVSDKEVLAIAETMPKLQHLQIFGNG

Query:  LTDEGLQAILDGCPDLESLDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEFSTEIINFRYDSEDFVSGFSGYDHYHYY
        LT++GL AILDGCP LE LDLRQCFN+N  G L ++C E+IK L  P+D  D  +  ++          F S F+  D YH+Y
Subjt:  LTDEGLQAILDGCPDLESLDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEFSTEIINFRYDSEDFVSGFSGYDHYHYY

Arabidopsis top hitse value%identityAlignment
AT4G05460.1 RNI-like superfamily protein3.5e-8154.67Show/hide
Query:  EARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFGTDKLLQYITQSS
        E+ NW ELP E+ S IL +LGAIEIL +AQ VC SWR++CKDP MWR IDMHNLG+L DM Y+LE+MC+HAVDRS G LVDI I YFGT  LL YI   S
Subjt:  EARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFGTDKLLQYITQSS

Query:  NQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVSDKEVLAIAETMPKLQHLQIFGNGLTDEGL
        + LR LR+  C  I+D+G ++AV KLPL E LE+   SF+VE+L++VGQ C  +K+LKLNK       K +D + LAIAETMPKL+HLQ+ GNGL+D GL
Subjt:  NQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVSDKEVLAIAETMPKLQHLQIFGNGLTDEGL

Query:  QAILDGCPDLESLDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEFSTEIINFRYDSEDFVSGFSGYDHYH-YYGFTEDSDFSDY
         AILD C +LE LDLR+CFN+N  G L ++C E +K++  P+D     +  +      YD  D +   SG D +  YY F+  SDFSDY
Subjt:  QAILDGCPDLESLDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEFSTEIINFRYDSEDFVSGFSGYDHYH-YYGFTEDSDFSDY

AT4G05470.1 RNI-like superfamily protein2.0e-5543.45Show/hide
Query:  EARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINI-EYFGTDKLLQYITQS
        E RNW++LP E+ + ILL+L   +IL +AQ VC  WR+ICKDP MWR I   N  +    ++D   MC+H VD S G L++IN+ E+F +D LL YIT  
Subjt:  EARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINI-EYFGTDKLLQYITQS

Query:  SNQLRRLRIAVCY-AISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLN-------------KQFCRGRGKVS-DKEVLAIAETMPK
           LR L + +C+  ++  G++ A++K+PLLE LE+      ++ LK +G +CP LK+LKLN                    G +  D + LAIAE+MPK
Subjt:  SNQLRRLRIAVCY-AISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLN-------------KQFCRGRGKVS-DKEVLAIAETMPK

Query:  LQHLQIFGNGLTDEGLQAILDGCPDLESLDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEFS
        L HLQ+  N LT+ GL AILDGCP LE LD+R+CF ++  G L ++C E IK L  P D T  Y ++
Subjt:  LQHLQIFGNGLTDEGLQAILDGCPDLESLDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEFS

AT4G05475.1 RNI-like superfamily protein1.8e-6144.98Show/hide
Query:  QSEAEARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFGTDKLLQYI
        + + E  NW++LP E+ + ILL+L   +IL +A+ +C +WR+ICKDP MWR I   NL +     +D E MC+H VD S G L++INIE+F +D LL YI
Subjt:  QSEAEARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFGTDKLLQYI

Query:  TQSSNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVS----------DKEVLAIAETMPKLQ
           S  L+ L I++   ++++G++  + KLPLLE L IF  S  ++ LK +G +CP LK+LKLN         +S          D + LAIAE+MPKL+
Subjt:  TQSSNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVS----------DKEVLAIAETMPKLQ

Query:  HLQIFGNGLTDEGLQAILDGCPDLES-LDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEFSTEI
        HLQ+ GNGLT+ GL AILDGCP LE  LD+R+CFN+N  G L ++C ++IK L  P D T  Y +S  +
Subjt:  HLQIFGNGLTDEGLQAILDGCPDLES-LDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEFSTEI

AT4G05490.1 RNI-like superfamily protein6.3e-6245.33Show/hide
Query:  VIQSEAEARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEY--FGTDKL
        V++ E +  NW ELP +++S ILL+L  +EIL +A+ VC SWR++ KDPL+WR IDM NL  L  + Y +E  C+H VD S G L++ NI+   F T  L
Subjt:  VIQSEAEARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEY--FGTDKL

Query:  LQYITQSSNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVSDKEVLAIAETMPKLQHLQIFG
        L Y+ + S+ LRRLR+     I+  G+ +A+ KLPLLE LE+   S   E  K +GQ+CP LK+LKL   +       SD + LAIA+TMP L HLQ+  
Subjt:  LQYITQSSNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVSDKEVLAIAETMPKLQHLQIFG

Query:  NGLTDEGLQAILDGCPDLESLDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEF-------------STEIINFRYDSEDFVSGF
        NGLT+ GL AILDGCP LE LDLRQCFN+N  G L ++C E+IK    P+D  D Y +               E  N+ Y S+D   G+
Subjt:  NGLTDEGLQAILDGCPDLESLDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEF-------------STEIINFRYDSEDFVSGF

AT4G05497.1 RNI-like superfamily protein1.2e-6051.52Show/hide
Query:  EARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDM---HNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFGTDKLLQYIT
        E RNW ELP E+ S ILL+LGAIEIL +AQ VC SWR++C+DP MWR ID+    NL    ++ Y +E +C  AVD S G L++INI+Y      L YI 
Subjt:  EARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDM---HNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFGTDKLLQYIT

Query:  QSSNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEI-FIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVSDKEVLAIAETMPKLQHLQIFGNGLT
          S+ LRRL +  C  +   G+++A  KLPLLE L+I +  S   + LK+VGQSCP L++LKLN   C G  K  DK  LAIAETMP L+HLQ+F NGL+
Subjt:  QSSNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEI-FIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVSDKEVLAIAETMPKLQHLQIFGNGLT

Query:  DEGLQAILDGCPDLESLDLRQCFNLNFAGKL
        + GL AIL+GCP L++L L QC N+N  G +
Subjt:  DEGLQAILDGCPDLESLDLRQCFNLNFAGKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCTAACTCTGTGATTCAGTCGGAAGCGGAAGCGAGGAACTGGCTTGAACTGCCGGTAGAAGTAATGTCTAAGATTCTCCTGAAGCTAGGCGCCATTGAAATCCT
CACCAGCGCTCAAAATGTCTGCTCTTCGTGGCGTAAGATCTGCAAGGACCCTCTCATGTGGCGTGCCATCGATATGCATAATCTGGGTGAGTTGAGTGATATGCATTACG
ATTTGGAGGTTATGTGCAAGCACGCTGTTGATCGTAGTTGTGGTCAGTTGGTCGATATCAACATCGAGTACTTTGGCACCGACAAGTTACTCCAATACATCACTCAGAGT
TCAAATCAACTCAGAAGACTCCGGATTGCAGTTTGCTATGCCATCTCAGATGAGGGATTGATCAAAGCAGTTTCGAAACTTCCATTGTTGGAGTGCCTTGAAATATTTAT
ACGTTCATTCAACGTGGAAACTTTGAAAATCGTTGGACAGAGTTGCCCTCTTCTGAAATCGCTGAAACTGAACAAACAGTTTTGCAGAGGACGAGGGAAGGTAAGCGACA
AGGAAGTCCTTGCCATTGCTGAAACTATGCCTAAGTTACAACACCTTCAGATATTTGGCAATGGCCTAACTGACGAGGGGTTGCAGGCCATTCTCGATGGCTGTCCTGAT
TTAGAATCTCTCGACTTACGCCAGTGTTTTAACTTGAATTTTGCTGGAAAGTTGGGACAAAAATGTGCTGAAAAGATCAAAATTTTGCATCTGCCTGATGATCCCACTGA
TGGCTATGAATTCAGCACTGAAATTATCAATTTTCGTTATGATTCTGAAGATTTCGTTTCTGGTTTCTCCGGTTACGACCACTACCACTACTATGGTTTCACAGAGGACA
GTGATTTCTCTGACTATGGTGACAGTTGGTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCTAACTCTGTGATTCAGTCGGAAGCGGAAGCGAGGAACTGGCTTGAACTGCCGGTAGAAGTAATGTCTAAGATTCTCCTGAAGCTAGGCGCCATTGAAATCCT
CACCAGCGCTCAAAATGTCTGCTCTTCGTGGCGTAAGATCTGCAAGGACCCTCTCATGTGGCGTGCCATCGATATGCATAATCTGGGTGAGTTGAGTGATATGCATTACG
ATTTGGAGGTTATGTGCAAGCACGCTGTTGATCGTAGTTGTGGTCAGTTGGTCGATATCAACATCGAGTACTTTGGCACCGACAAGTTACTCCAATACATCACTCAGAGT
TCAAATCAACTCAGAAGACTCCGGATTGCAGTTTGCTATGCCATCTCAGATGAGGGATTGATCAAAGCAGTTTCGAAACTTCCATTGTTGGAGTGCCTTGAAATATTTAT
ACGTTCATTCAACGTGGAAACTTTGAAAATCGTTGGACAGAGTTGCCCTCTTCTGAAATCGCTGAAACTGAACAAACAGTTTTGCAGAGGACGAGGGAAGGTAAGCGACA
AGGAAGTCCTTGCCATTGCTGAAACTATGCCTAAGTTACAACACCTTCAGATATTTGGCAATGGCCTAACTGACGAGGGGTTGCAGGCCATTCTCGATGGCTGTCCTGAT
TTAGAATCTCTCGACTTACGCCAGTGTTTTAACTTGAATTTTGCTGGAAAGTTGGGACAAAAATGTGCTGAAAAGATCAAAATTTTGCATCTGCCTGATGATCCCACTGA
TGGCTATGAATTCAGCACTGAAATTATCAATTTTCGTTATGATTCTGAAGATTTCGTTTCTGGTTTCTCCGGTTACGACCACTACCACTACTATGGTTTCACAGAGGACA
GTGATTTCTCTGACTATGGTGACAGTTGGTATTAA
Protein sequenceShow/hide protein sequence
MESNSVIQSEAEARNWLELPVEVMSKILLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGELSDMHYDLEVMCKHAVDRSCGQLVDINIEYFGTDKLLQYITQS
SNQLRRLRIAVCYAISDEGLIKAVSKLPLLECLEIFIRSFNVETLKIVGQSCPLLKSLKLNKQFCRGRGKVSDKEVLAIAETMPKLQHLQIFGNGLTDEGLQAILDGCPD
LESLDLRQCFNLNFAGKLGQKCAEKIKILHLPDDPTDGYEFSTEIINFRYDSEDFVSGFSGYDHYHYYGFTEDSDFSDYGDSWY