; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0014054 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014054
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionF-box protein SKIP19-like
Genome locationchr1:54820452..54821849
RNA-Seq ExpressionLag0014054
SyntenyLag0014054
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001611 - Leucine-rich repeat
IPR001810 - F-box domain
IPR006553 - Leucine-rich repeat, cysteine-containing subtype
IPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581459.1 F-box protein SKIP19, partial [Cucurbita argyrosperma subsp. sororia]1.3e-9567.52Show/hide
Query:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRNMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEYFGTD
        NS+P    +  ARN L+LPAD+TS ILLKLG ++ILT+AQ VCSSWR+IC+DPLMWR +DMR  GD+ D+ ++L+ MCR A+DRSCGQLI INIE+FGTD
Subjt:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRNMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEYFGTD

Query:  DLLQYITWSSNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI
        DLLQYIT SSN+LR+LR+V C+ ISDEGL +A  KLPLLE LEIS  SFDV TL+ +G C PLLKSLKLN+QF   RR   D  A+AIAE MP LRHLQI
Subjt:  DLLQYITWSSNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI

Query:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKVLHLPHDSTDGYEFTTEI-NFWYDSEDD
        FGN LTNRGL+AILDGCPDL+SLDLRQCFNL LAGQL  +C+E IK L LPHD TD YE++TEI  +  D E+D
Subjt:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKVLHLPHDSTDGYEFTTEI-NFWYDSEDD

KAG7034751.1 Protein BREAST CANCER SUSCEPTIBILITY 1-like protein [Cucurbita argyrosperma subsp. argyrosperma]2.5e-9668.25Show/hide
Query:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRNMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEYFGTD
        NS+P    +  ARN L+LPAD+TS ILLKLG ++ILT+AQ VCSSWR+IC+DPLMWR +DMR  GD+ D+ ++L+ MCR A+DRSCGQLI INIE+FGTD
Subjt:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRNMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEYFGTD

Query:  DLLQYITWSSNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI
        DLLQYIT SSNQLR+LR+V C+ ISDEGL +A  KLPLLE LEIS  SFDV TL+ +G C PLLKSLKLN+QF   RR   D  A+AIAE MP LRHLQI
Subjt:  DLLQYITWSSNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI

Query:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKVLHLPHDSTDGYEFTTEI-NFWYDSEDD
        FGN LTNRGL+AILDGCPDL+SLDLRQCFNL LAGQL  +C+E IK L LPHD TD YEF+TEI  +  D E+D
Subjt:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKVLHLPHDSTDGYEFTTEI-NFWYDSEDD

XP_022978592.1 F-box protein SKIP19-like [Cucurbita maxima]8.7e-9768.25Show/hide
Query:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRNMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEYFGTD
        NS+P    +  ARN L+LPAD+TS ILLKLG ++ILT+AQ VCSSWR+IC+DPLMWR +DMR  GD+ D+ ++L+ MCR A+DRSCGQLI INIE+FGTD
Subjt:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRNMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEYFGTD

Query:  DLLQYITWSSNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI
        DLLQYIT SSNQLR+LR+V C+ ISDEG  +A  KLPLLE LEIS  SFDV TL+ +GHC PLLKSLKLN+QF   RR   D  A+AIAE MP LRHLQI
Subjt:  DLLQYITWSSNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI

Query:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKVLHLPHDSTDGYEFTTEI-NFWYDSEDD
        FGN LTNRGL+AILDGCPDL+SLDLRQCFNL LAGQL  +C+E IK L LPHD TD YEF+TEI  +  D E+D
Subjt:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKVLHLPHDSTDGYEFTTEI-NFWYDSEDD

XP_023543623.1 F-box protein SKIP19-like [Cucurbita pepo subsp. pepo]9.7e-9667.88Show/hide
Query:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRNMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEYFGTD
        NS+P    +  ARN L+LPAD+TS ILLKLG ++ILT+AQ VCSSWR+IC+DPLMWR +DMR  GD+ D+ ++L+ MCR A+DRSCGQLI INIE+FGTD
Subjt:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRNMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEYFGTD

Query:  DLLQYITWSSNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI
        DLL YIT SSNQLR+LR+V C+ ISDEGL +A  KLPLLE LEIS  SFDV TL+ +G C PLLKSLKLN+QF   RR   D  A+AIAE MP LRHLQI
Subjt:  DLLQYITWSSNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI

Query:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKVLHLPHDSTDGYEFTTEI-NFWYDSEDD
        FGN LTNRGL+AILDGCPDL+SLDLRQCFNL LAGQL  +C+E IK L LPHD TD YEF+TEI  +  D E+D
Subjt:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKVLHLPHDSTDGYEFTTEI-NFWYDSEDD

XP_038883506.1 F-box protein SKIP19-like [Benincasa hispida]2.1e-10371.84Show/hide
Query:  MNSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRNMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEYFGT
        M SN +IQS+  ARN LDLPA++ S ILLKLGAIEILTSAQ VCSSWR+ICKDPLMWR IDMRN G+ +D+ H+L+IMCRHA+DRSCGQLIDINIEYFGT
Subjt:  MNSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRNMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEYFGT

Query:  DDLLQYITWSSNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQ
        D+LLQYIT SSNQLRRLR+  C  ISDEGLTEA  +LPLLEHLEI + SFDV TLK VG C PLLK LKL ++       V + EA+AIAETMPKLRHLQ
Subjt:  DDLLQYITWSSNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQ

Query:  IFGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKVLHLPHDS-TDGYEFTTE-INFW-YDSEDD
        I GNGLTN GLQAILDGCPDL+SLDLRQCF+L L GQL K CAE  KVLHLPHD  T+G+E T + I+F  +DSED+
Subjt:  IFGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKVLHLPHDS-TDGYEFTTE-INFW-YDSEDD

TrEMBL top hitse value%identityAlignment
A0A6J1CXS5 F-box protein SKIP19-like2.3e-9567.65Show/hide
Query:  MNSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRNMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEYFGT
        M SNP+  S   ARN L+LPAD+TS ILLKLGAIEIL+SAQ VCS WR+ICKDPLMWR +DM NMG++ D+ ++L+ MC  A+DRSCG+LIDINI+YFGT
Subjt:  MNSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRNMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEYFGT

Query:  DDLLQYITWSSNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQ
        ++LLQYIT SSNQLRRLRIV C SI+D GL+EA  KLPLLEHLEISLCSF  +TL+ VG C  LLKSLKL+ Q CR      D +A+AIAE MP LR+LQ
Subjt:  DDLLQYITWSSNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQ

Query:  IFGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKVLHLPHDSTDGYEFTTEINFWYDSE
        IFG+ LT+RGLQAILDGCPDL+SLDLRQCFNL L GQL   CAE IK L LPHD TD YEF  E + + D +
Subjt:  IFGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKVLHLPHDSTDGYEFTTEINFWYDSE

A0A6J1ECV6 F-box protein SKIP19-like isoform X11.0e-9567.88Show/hide
Query:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRNMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEYFGTD
        NS+P    +  ARN L+LPAD+TS ILLKLG ++ILT+AQ VCSSWR+IC+DPLMWR +DMR  GD+ D+ ++L+ MCR A+DRSCGQLI I IE+FGTD
Subjt:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRNMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEYFGTD

Query:  DLLQYITWSSNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI
        DLLQYIT SSNQLR LR+V C+ ISDEGL +A  KLPLLE LEIS  SFDV TL+ +G C PLLKSLKLN+QF   RR   D  A+AIAE MP LRHLQI
Subjt:  DLLQYITWSSNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI

Query:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKVLHLPHDSTDGYEFTTEI-NFWYDSEDD
        FGN LTNRGL+AILDGCPDL+SLDLRQCFNL LAGQL  +C+E IK L LPHD TD YEF+TEI  +  D E+D
Subjt:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKVLHLPHDSTDGYEFTTEI-NFWYDSEDD

A0A6J1EGI8 F-box protein SKIP19-like isoform X21.0e-9567.88Show/hide
Query:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRNMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEYFGTD
        NS+P    +  ARN L+LPAD+TS ILLKLG ++ILT+AQ VCSSWR+IC+DPLMWR +DMR  GD+ D+ ++L+ MCR A+DRSCGQLI I IE+FGTD
Subjt:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRNMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEYFGTD

Query:  DLLQYITWSSNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI
        DLLQYIT SSNQLR LR+V C+ ISDEGL +A  KLPLLE LEIS  SFDV TL+ +G C PLLKSLKLN+QF   RR   D  A+AIAE MP LRHLQI
Subjt:  DLLQYITWSSNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI

Query:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKVLHLPHDSTDGYEFTTEI-NFWYDSEDD
        FGN LTNRGL+AILDGCPDL+SLDLRQCFNL LAGQL  +C+E IK L LPHD TD YEF+TEI  +  D E+D
Subjt:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKVLHLPHDSTDGYEFTTEI-NFWYDSEDD

A0A6J1ILH5 F-box protein SKIP19-like4.2e-9768.25Show/hide
Query:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRNMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEYFGTD
        NS+P    +  ARN L+LPAD+TS ILLKLG ++ILT+AQ VCSSWR+IC+DPLMWR +DMR  GD+ D+ ++L+ MCR A+DRSCGQLI INIE+FGTD
Subjt:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRNMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEYFGTD

Query:  DLLQYITWSSNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI
        DLLQYIT SSNQLR+LR+V C+ ISDEG  +A  KLPLLE LEIS  SFDV TL+ +GHC PLLKSLKLN+QF   RR   D  A+AIAE MP LRHLQI
Subjt:  DLLQYITWSSNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI

Query:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKVLHLPHDSTDGYEFTTEI-NFWYDSEDD
        FGN LTNRGL+AILDGCPDL+SLDLRQCFNL LAGQL  +C+E IK L LPHD TD YEF+TEI  +  D E+D
Subjt:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKVLHLPHDSTDGYEFTTEI-NFWYDSEDD

A0A6P3ZH66 F-box protein SKIP194.4e-9465.34Show/hide
Query:  MNSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRNMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEYFGT
        M S+P    +   RN L+LP D+TSTIL +LGAIEILTSAQ VCSSWR ICKDPLMWR IDMRN GD + + ++L+ MCRHAID SCGQL+DINIE+FGT
Subjt:  MNSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRNMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEYFGT

Query:  DDLLQYITWSSNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRR---VGDAEAVAIAETMPKLR
        D+LL+Y+T  S+ +RRLR++ C SISD GL+EAA KLPLLE LEIS  S     L+ +GHC PLLKSLKLN   CRG R      D EAVAIA++MP+LR
Subjt:  DDLLQYITWSSNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRR---VGDAEAVAIAETMPKLR

Query:  HLQIFGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKVLHLPHDSTDGYEFTTEINFWYDSEDD
        HLQ+FGN LTN GLQAILDGCP L+SLDLRQCFN+ LAG L KRCAE IK L  P+DST+GYEF   I+  YD +DD
Subjt:  HLQIFGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKVLHLPHDSTDGYEFTTEINFWYDSEDD

SwissProt top hitse value%identityAlignment
Q9M0U6 Putative F-box/LRR-repeat protein 226.8e-6047.49Show/hide
Query:  PMIQSKRRARNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRNMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEY--FGTDD
        P+++ + +  N  +LP DL S+ILL+L  +EIL +A+ VC SWRR+ KDPL+WR IDMRN+   + +Y  ++  CRH +D S G L++ NI+   F T  
Subjt:  PMIQSKRRARNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRNMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEY--FGTDD

Query:  LLQYITWSSNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQIF
        LL Y+   S+ LRRLR V    I+  G+ EA  KLPLLE LE+  CS +    K +G   P LK+LKL   +        D +A+AIA+TMP L HLQ+ 
Subjt:  LLQYITWSSNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQIF

Query:  GNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKVLHLPHDSTDGYEF
         NGLTN GL AILDGCP L+ LDLRQCFN+ L G LE++C E IK    P+D  D Y +
Subjt:  GNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKVLHLPHDSTDGYEF

Q9M0U7 Putative F-box protein At4g054759.8e-5947.55Show/hide
Query:  NLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRN--MGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEYFGTDDLLQYITWSSN
        N +DLP +LT++ILL+L   +IL +A+ +C +WRRICKDP MWR I++R+  M +F     + + MCRH +D S G L++INIE+F +D LL YI   S 
Subjt:  NLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRN--MGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEYFGTDDLLQYITWSSN

Query:  QLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLN---KQFCRGRRRVG-------DAEAVAIAETMPKLRHLQIF
         L+ L I     ++++G+     KLPLLE L I   S  +  LK +GH  P LK+LKLN    +      +VG       D +A+AIAE+MPKLRHLQ+ 
Subjt:  QLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLN---KQFCRGRRRVG-------DAEAVAIAETMPKLRHLQIF

Query:  GNGLTNRGLQAILDGCPDLKS-LDLRQCFNLRLAGQLEKRCAETIKVLHLPHDSTDGYEFTTEIN
        GNGLTN GL AILDGCP L+  LD+R+CFN+ L G LEKRC + IK L  PHDST  Y ++  ++
Subjt:  GNGLTNRGLQAILDGCPDLKS-LDLRQCFNLRLAGQLEKRCAETIKVLHLPHDSTDGYEFTTEIN

Q9M0U9 F-box protein SKIP195.5e-7856.69Show/hide
Query:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRNMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEYFGTD
        +S P       + N  +LP +LTS IL +LGAIEIL +AQ VC SWRR+CKDP MWR IDM N+GD  D+ +NL+IMCRHA+DRS G L+DI I YFGT 
Subjt:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRNMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEYFGTD

Query:  DLLQYITWSSNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI
        DLL YI   S+ LR LR++ CS I+D+G  EA  KLP LE LE+S CSF V +L++VG C   +K+LKLNK      ++  D +A+AIAETMPKLRHLQ+
Subjt:  DLLQYITWSSNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI

Query:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKVLHLPHDS
         GNGL++ GL AILD C +L+ LDLR+CFN+ L G L+KRC E++KV+  P+DS
Subjt:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKVLHLPHDS

Q9S9V8 Putative F-box/LRR-repeat protein 93.2e-5748.16Show/hide
Query:  NSNPMIQSKRRA--RNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMR---NMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIE
        +S+P  Q+ +    RN  +LP +LTS+ILL+LGAIEIL +AQ VC SWRR+C+DP MWR ID+R   N+ +  ++++ ++ +C  A+D S G L++INI+
Subjt:  NSNPMIQSKRRA--RNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMR---NMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIE

Query:  YFGTDDLLQYITWSSNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISL-CSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPK
        Y      L YI   S+ LRRL +V C+ +   G+ EAA KLPLLE L+I+   S   + LK+VG   P L++LKLN   C G  +  D  A+AIAETMP 
Subjt:  YFGTDDLLQYITWSSNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISL-CSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPK

Query:  LRHLQIFGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEK
        LRHLQ+F NGL+  GL AIL+GCP LK+L L QC N+ + G + K
Subjt:  LRHLQIFGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEK

Q9S9V9 Putative F-box/LRR-repeat protein 232.7e-7253.94Show/hide
Query:  PMIQSKRRARNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRNMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEYFGTDDLL
        P +   ++ RN  +LP+ LTS+ILL+LGAIEIL +AQ VC  W R+CKDP MWR ID+ N  D     ++L+ MCRHA+DRS G LI+I I Y+GT+DL+
Subjt:  PMIQSKRRARNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRNMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEYFGTDDLL

Query:  QYITWSSNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRRVG-DAEAVAIAETMPKLRHLQIFG
         YI   S+ L+ L +V C  I+DEG+ +A  K+PLLE+LE+S C F   +L+ +G   P LK+LKLN+         G D  A AIAE+MP+LRHLQ+ G
Subjt:  QYITWSSNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRRVG-DAEAVAIAETMPKLRHLQIFG

Query:  NGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKVLHLPHDSTD
        NGLTN+GL AILDGCP L+ LDLRQCFN+ L G L+KRC E IK L  P+DS D
Subjt:  NGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKVLHLPHDSTD

Arabidopsis top hitse value%identityAlignment
AT4G05460.1 RNI-like superfamily protein3.9e-7956.69Show/hide
Query:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRNMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEYFGTD
        +S P       + N  +LP +LTS IL +LGAIEIL +AQ VC SWRR+CKDP MWR IDM N+GD  D+ +NL+IMCRHA+DRS G L+DI I YFGT 
Subjt:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRNMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEYFGTD

Query:  DLLQYITWSSNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI
        DLL YI   S+ LR LR++ CS I+D+G  EA  KLP LE LE+S CSF V +L++VG C   +K+LKLNK      ++  D +A+AIAETMPKLRHLQ+
Subjt:  DLLQYITWSSNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI

Query:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKVLHLPHDS
         GNGL++ GL AILD C +L+ LDLR+CFN+ L G L+KRC E++KV+  P+DS
Subjt:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKVLHLPHDS

AT4G05470.1 RNI-like superfamily protein8.8e-5546.1Show/hide
Query:  RRARNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRNMGDFHDVYHNLDI--MCRHAIDRSCGQLIDINI-EYFGTDDLLQYI
        +  RN +DLP +LT++ILL+L   +IL +AQ VC  WRRICKDP MWR I+ R+      + +N D   MCRH +D S G L++IN+ E+F +D LL YI
Subjt:  RRARNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRNMGDFHDVYHNLDI--MCRHAIDRSCGQLIDINI-EYFGTDDLLQYI

Query:  TWSSNQLRRLRIVSC-SSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLN----------KQFCRGRRRVG----DAEAVAIAET
        T     LR L +  C   ++  G+  A  K+PLLE LE++     +  LK +GH  P LK+LKLN          K        +G    D +A+AIAE+
Subjt:  TWSSNQLRRLRIVSC-SSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLN----------KQFCRGRRRVG----DAEAVAIAET

Query:  MPKLRHLQIFGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKVLHLPHDSTDGYEF
        MPKL HLQ+  N LTN GL AILDGCP L+ LD+R+CF + L G LEKRC E IK L  P DST  Y +
Subjt:  MPKLRHLQIFGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKVLHLPHDSTDGYEF

AT4G05475.1 RNI-like superfamily protein7.0e-6047.55Show/hide
Query:  NLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRN--MGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEYFGTDDLLQYITWSSN
        N +DLP +LT++ILL+L   +IL +A+ +C +WRRICKDP MWR I++R+  M +F     + + MCRH +D S G L++INIE+F +D LL YI   S 
Subjt:  NLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRN--MGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEYFGTDDLLQYITWSSN

Query:  QLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLN---KQFCRGRRRVG-------DAEAVAIAETMPKLRHLQIF
         L+ L I     ++++G+     KLPLLE L I   S  +  LK +GH  P LK+LKLN    +      +VG       D +A+AIAE+MPKLRHLQ+ 
Subjt:  QLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLN---KQFCRGRRRVG-------DAEAVAIAETMPKLRHLQIF

Query:  GNGLTNRGLQAILDGCPDLKS-LDLRQCFNLRLAGQLEKRCAETIKVLHLPHDSTDGYEFTTEIN
        GNGLTN GL AILDGCP L+  LD+R+CFN+ L G LEKRC + IK L  PHDST  Y ++  ++
Subjt:  GNGLTNRGLQAILDGCPDLKS-LDLRQCFNLRLAGQLEKRCAETIKVLHLPHDSTDGYEFTTEIN

AT4G05490.1 RNI-like superfamily protein4.8e-6147.49Show/hide
Query:  PMIQSKRRARNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRNMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEY--FGTDD
        P+++ + +  N  +LP DL S+ILL+L  +EIL +A+ VC SWRR+ KDPL+WR IDMRN+   + +Y  ++  CRH +D S G L++ NI+   F T  
Subjt:  PMIQSKRRARNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRNMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEY--FGTDD

Query:  LLQYITWSSNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQIF
        LL Y+   S+ LRRLR V    I+  G+ EA  KLPLLE LE+  CS +    K +G   P LK+LKL   +        D +A+AIA+TMP L HLQ+ 
Subjt:  LLQYITWSSNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQIF

Query:  GNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKVLHLPHDSTDGYEF
         NGLTN GL AILDGCP L+ LDLRQCFN+ L G LE++C E IK    P+D  D Y +
Subjt:  GNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKVLHLPHDSTDGYEF

AT4G05497.1 RNI-like superfamily protein2.2e-5848.16Show/hide
Query:  NSNPMIQSKRRA--RNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMR---NMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIE
        +S+P  Q+ +    RN  +LP +LTS+ILL+LGAIEIL +AQ VC SWRR+C+DP MWR ID+R   N+ +  ++++ ++ +C  A+D S G L++INI+
Subjt:  NSNPMIQSKRRA--RNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMR---NMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIE

Query:  YFGTDDLLQYITWSSNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISL-CSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPK
        Y      L YI   S+ LRRL +V C+ +   G+ EAA KLPLLE L+I+   S   + LK+VG   P L++LKLN   C G  +  D  A+AIAETMP 
Subjt:  YFGTDDLLQYITWSSNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISL-CSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPK

Query:  LRHLQIFGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEK
        LRHLQ+F NGL+  GL AIL+GCP LK+L L QC N+ + G + K
Subjt:  LRHLQIFGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCGAACCCTATGATTCAGTCGAAAAGGCGAGCGAGGAATTTGCTTGATCTTCCTGCAGATTTAACGTCTACGATTCTGCTGAAGCTAGGCGCCATTGAAATCCT
CACCAGCGCCCAATACGTCTGCTCTTCGTGGCGTAGGATCTGCAAGGACCCTCTCATGTGGCGTGCCATCGATATGCGCAATATGGGCGATTTCCATGATGTATATCACA
ATTTGGACATTATGTGCAGGCACGCCATTGACCGTAGTTGTGGCCAATTGATCGATATCAACATCGAGTACTTTGGCACCGATGACTTGCTCCAGTACATCACTTGGAGT
TCAAATCAACTTAGAAGACTTCGAATCGTTAGTTGTTCTAGCATCTCAGATGAGGGATTGACTGAAGCAGCTTTTAAACTTCCATTGTTGGAGCATCTTGAAATATCTCT
CTGTTCATTTGATGTGAGAACTTTGAAAATTGTTGGACATTGTAGCCCTCTTTTGAAATCGCTGAAACTGAACAAACAGTTCTGCAGAGGACGTCGGAGGGTAGGCGACG
CAGAGGCCGTTGCTATTGCTGAAACTATGCCCAAGTTACGACACCTTCAGATATTTGGCAATGGCCTAACTAACAGGGGCTTGCAGGCCATTCTTGATGGCTGTCCTGAT
TTAAAATCTCTCGACTTACGCCAGTGTTTCAACTTGAGATTGGCAGGACAGTTGGAAAAAAGATGTGCTGAAACGATCAAAGTTTTGCATCTGCCTCACGATTCCACTGA
TGGCTATGAATTTACCACAGAAATTAATTTTTGGTATGATTCTGAAGATGATTTATGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTCGAACCCTATGATTCAGTCGAAAAGGCGAGCGAGGAATTTGCTTGATCTTCCTGCAGATTTAACGTCTACGATTCTGCTGAAGCTAGGCGCCATTGAAATCCT
CACCAGCGCCCAATACGTCTGCTCTTCGTGGCGTAGGATCTGCAAGGACCCTCTCATGTGGCGTGCCATCGATATGCGCAATATGGGCGATTTCCATGATGTATATCACA
ATTTGGACATTATGTGCAGGCACGCCATTGACCGTAGTTGTGGCCAATTGATCGATATCAACATCGAGTACTTTGGCACCGATGACTTGCTCCAGTACATCACTTGGAGT
TCAAATCAACTTAGAAGACTTCGAATCGTTAGTTGTTCTAGCATCTCAGATGAGGGATTGACTGAAGCAGCTTTTAAACTTCCATTGTTGGAGCATCTTGAAATATCTCT
CTGTTCATTTGATGTGAGAACTTTGAAAATTGTTGGACATTGTAGCCCTCTTTTGAAATCGCTGAAACTGAACAAACAGTTCTGCAGAGGACGTCGGAGGGTAGGCGACG
CAGAGGCCGTTGCTATTGCTGAAACTATGCCCAAGTTACGACACCTTCAGATATTTGGCAATGGCCTAACTAACAGGGGCTTGCAGGCCATTCTTGATGGCTGTCCTGAT
TTAAAATCTCTCGACTTACGCCAGTGTTTCAACTTGAGATTGGCAGGACAGTTGGAAAAAAGATGTGCTGAAACGATCAAAGTTTTGCATCTGCCTCACGATTCCACTGA
TGGCTATGAATTTACCACAGAAATTAATTTTTGGTATGATTCTGAAGATGATTTATGGTGA
Protein sequenceShow/hide protein sequence
MNSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILTSAQYVCSSWRRICKDPLMWRAIDMRNMGDFHDVYHNLDIMCRHAIDRSCGQLIDINIEYFGTDDLLQYITWS
SNQLRRLRIVSCSSISDEGLTEAAFKLPLLEHLEISLCSFDVRTLKIVGHCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQIFGNGLTNRGLQAILDGCPD
LKSLDLRQCFNLRLAGQLEKRCAETIKVLHLPHDSTDGYEFTTEINFWYDSEDDLW