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Lag0014109 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014109
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionF-box protein
Genome locationchr1:55291180..55291697
RNA-Seq ExpressionLag0014109
SyntenyLag0014109
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585288.1 F-box protein, partial [Cucurbita argyrosperma subsp. sororia]6.2e-1568.18Show/hide
Query:  FDFYHFVVKSFFDLISPILVQSESQNSPMQILRQFAPIHRLEIEFPTGNLKVDRVGALNGERSLGL
        + F+  VVKSFFDLISPILVQSESQNSP QILRQF  I RLEIEFPTG+LKV+R+G +      G+
Subjt:  FDFYHFVVKSFFDLISPILVQSESQNSPMQILRQFAPIHRLEIEFPTGNLKVDRVGALNGERSLGL

XP_022951596.1 F-box protein At1g22220-like [Cucurbita moschata]6.2e-1568.18Show/hide
Query:  FDFYHFVVKSFFDLISPILVQSESQNSPMQILRQFAPIHRLEIEFPTGNLKVDRVGALNGERSLGL
        + F+  VVKSFFDLISPILVQSESQNSP QILRQF  I RLEIEFPTG+LKV+R+G +      G+
Subjt:  FDFYHFVVKSFFDLISPILVQSESQNSPMQILRQFAPIHRLEIEFPTGNLKVDRVGALNGERSLGL

XP_023002829.1 F-box protein At1g78100-like [Cucurbita maxima]6.2e-1568.18Show/hide
Query:  FDFYHFVVKSFFDLISPILVQSESQNSPMQILRQFAPIHRLEIEFPTGNLKVDRVGALNGERSLGL
        + F+  VVKSFFDLISPILVQSESQNSP QILRQF  I RLEIEFPTG+LKV+R+G +      G+
Subjt:  FDFYHFVVKSFFDLISPILVQSESQNSPMQILRQFAPIHRLEIEFPTGNLKVDRVGALNGERSLGL

XP_023537288.1 F-box protein At1g22220-like [Cucurbita pepo subsp. pepo]6.2e-1568.18Show/hide
Query:  FDFYHFVVKSFFDLISPILVQSESQNSPMQILRQFAPIHRLEIEFPTGNLKVDRVGALNGERSLGL
        + F+  VVKSFFDLISPILVQSESQNSP QILRQF  I RLEIEFPTG+LKV+R+G +      G+
Subjt:  FDFYHFVVKSFFDLISPILVQSESQNSPMQILRQFAPIHRLEIEFPTGNLKVDRVGALNGERSLGL

XP_038886087.1 F-box protein At1g22220 [Benincasa hispida]2.4e-1175.47Show/hide
Query:  FYHFVVKSFFDLISPILVQSESQNSPMQILRQFAPIHRLEIEFPTGNLKVDRV
        F+  VVKSFF LIS +LVQSESQNSP QILRQF  I RL+IEFPTG+LKV+RV
Subjt:  FYHFVVKSFFDLISPILVQSESQNSPMQILRQFAPIHRLEIEFPTGNLKVDRV

TrEMBL top hitse value%identityAlignment
A0A0A0LN04 F-box domain-containing protein2.9e-1069.81Show/hide
Query:  FYHFVVKSFFDLISPILVQSESQNSPMQILRQFAPIHRLEIEFPTGNLKVDRV
        F+  V+KSF DL+SPIL+QSESQNSP QILRQF  I  L+IEFPT +LKV+RV
Subjt:  FYHFVVKSFFDLISPILVQSESQNSPMQILRQFAPIHRLEIEFPTGNLKVDRV

A0A1S3BC00 F-box protein At1g222201.0e-1071.7Show/hide
Query:  FYHFVVKSFFDLISPILVQSESQNSPMQILRQFAPIHRLEIEFPTGNLKVDRV
        F+  VVKSF DL+SPILVQSE+QNSP QILRQF  I  L+IEFPT +LKV+RV
Subjt:  FYHFVVKSFFDLISPILVQSESQNSPMQILRQFAPIHRLEIEFPTGNLKVDRV

A0A5A7VGI7 F-box protein1.0e-1071.7Show/hide
Query:  FYHFVVKSFFDLISPILVQSESQNSPMQILRQFAPIHRLEIEFPTGNLKVDRV
        F+  VVKSF DL+SPILVQSE+QNSP QILRQF  I  L+IEFPT +LKV+RV
Subjt:  FYHFVVKSFFDLISPILVQSESQNSPMQILRQFAPIHRLEIEFPTGNLKVDRV

A0A6J1GI01 F-box protein At1g22220-like3.0e-1568.18Show/hide
Query:  FDFYHFVVKSFFDLISPILVQSESQNSPMQILRQFAPIHRLEIEFPTGNLKVDRVGALNGERSLGL
        + F+  VVKSFFDLISPILVQSESQNSP QILRQF  I RLEIEFPTG+LKV+R+G +      G+
Subjt:  FDFYHFVVKSFFDLISPILVQSESQNSPMQILRQFAPIHRLEIEFPTGNLKVDRVGALNGERSLGL

A0A6J1KRK0 F-box protein At1g78100-like3.0e-1568.18Show/hide
Query:  FDFYHFVVKSFFDLISPILVQSESQNSPMQILRQFAPIHRLEIEFPTGNLKVDRVGALNGERSLGL
        + F+  VVKSFFDLISPILVQSESQNSP QILRQF  I RLEIEFPTG+LKV+R+G +      G+
Subjt:  FDFYHFVVKSFFDLISPILVQSESQNSPMQILRQFAPIHRLEIEFPTGNLKVDRVGALNGERSLGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCTTTCTATTAGCTTCCATTTCTTCTCTACTTTTTCGGTCATCTCCATCGGTCTTCTTCTCCATCTCTCGTCTTCTTCATTCTTCCGTCTTCTCCATATTTCTCCA
CTTGTTCGTTGAGGCCTGGAGAAAACGCTTCAATTTCAACCTTCATTTTGATTTTTATCATTTTGTCGTCAAGTCGTTCTTCGATTTGATTTCCCCTATTCTCGTACAAT
CCGAGTCGCAGAACTCTCCGATGCAAATCCTCCGCCAGTTCGCCCCGATCCACCGCCTCGAGATCGAGTTTCCGACGGGCAATCTCAAGGTCGACAGAGTGGGGGCGTTA
AATGGAGAGCGGAGTTTGGGATTAGCTTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCTTTCTATTAGCTTCCATTTCTTCTCTACTTTTTCGGTCATCTCCATCGGTCTTCTTCTCCATCTCTCGTCTTCTTCATTCTTCCGTCTTCTCCATATTTCTCCA
CTTGTTCGTTGAGGCCTGGAGAAAACGCTTCAATTTCAACCTTCATTTTGATTTTTATCATTTTGTCGTCAAGTCGTTCTTCGATTTGATTTCCCCTATTCTCGTACAAT
CCGAGTCGCAGAACTCTCCGATGCAAATCCTCCGCCAGTTCGCCCCGATCCACCGCCTCGAGATCGAGTTTCCGACGGGCAATCTCAAGGTCGACAGAGTGGGGGCGTTA
AATGGAGAGCGGAGTTTGGGATTAGCTTCGTGA
Protein sequenceShow/hide protein sequence
MPFLLASISSLLFRSSPSVFFSISRLLHSSVFSIFLHLFVEAWRKRFNFNLHFDFYHFVVKSFFDLISPILVQSESQNSPMQILRQFAPIHRLEIEFPTGNLKVDRVGAL
NGERSLGLAS