| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_008439484.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial [Cucumis melo] | 1.1e-56 | 56.62 | Show/hide |
Query: MWSATVSFPSLSNFQGPIILNSRLNCSKPQSLNLRASFFDYPLASRLMPIVIDAILFLWFVFQVLFLLIDYGGIYMSLADGSYNSLRFLAQSMTLIGLHF
MW+ TVS PS+SN +GP+ N+ L S SLNLRASFFDYPLASRLM
Subjt: MWSATVSFPSLSNFQGPIILNSRLNCSKPQSLNLRASFFDYPLASRLMPIVIDAILFLWFVFQVLFLLIDYGGIYMSLADGSYNSLRFLAQSMTLIGLHF
Query: TSLKDSFFMKVTYQTDLPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGSDSFGGYPRTS
+LPYSTNESRLQEEFSNFGEIAEVLLAKDR TKR KGYAFIQYTCQDDAMLALENMDCK FDGR IYVE+AKPGS SFGGYPRTS
Subjt: TSLKDSFFMKVTYQTDLPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGSDSFGGYPRTS
Query: GPPKERPKLELEEVADCWY
GPPKERP +E E++ADCWY
Subjt: GPPKERPKLELEEVADCWY
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| XP_022977992.1 small RNA-binding protein 11, chloroplastic [Cucurbita maxima] | 1.7e-57 | 59.73 | Show/hide |
Query: MWSATVSFPSLSNFQGPIILNSRLNCSKPQSLNLRASFFDYPLASRLMPIVIDAILFLWFVFQVLFLLIDYGGIYMSLADGSYNSLRFLAQSMTLIGLHF
MW+ATVSFPSLSN +GPI LN+RL+ SK QSLNLRASF DYPLASRLM
Subjt: MWSATVSFPSLSNFQGPIILNSRLNCSKPQSLNLRASFFDYPLASRLMPIVIDAILFLWFVFQVLFLLIDYGGIYMSLADGSYNSLRFLAQSMTLIGLHF
Query: TSLKDSFFMKVTYQTDLPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGSDSFGGYPRTS
+LPYSTNE+RLQEEFSNFGEIAEVLLAKDR+TK KGYAFIQYT QDDAMLALENMDCKKFDGR IYVELAKPGS SFGGYP TS
Subjt: TSLKDSFFMKVTYQTDLPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGSDSFGGYPRTS
Query: GPPKER--PKLELEEVADCWY
GPPKER PKL EEVADCWY
Subjt: GPPKER--PKLELEEVADCWY
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| XP_038883014.1 UBP1-associated proteins 1B isoform X1 [Benincasa hispida] | 8.8e-67 | 65.3 | Show/hide |
Query: MWSATVSFPSLSNFQGPIILNSRLNCSKPQSLNLRASFFDYPLASRLMPIVIDAILFLWFVFQVLFLLIDYGGIYMSLADGSYNSLRFLAQSMTLIGLHF
MW+ATVSFPS+SN +GPI+ N+R + SK SLN RASF DYPLASRL +V FL+ FQ++F L I D +++ L L+F
Subjt: MWSATVSFPSLSNFQGPIILNSRLNCSKPQSLNLRASFFDYPLASRLMPIVIDAILFLWFVFQVLFLLIDYGGIYMSLADGSYNSLRFLAQSMTLIGLHF
Query: TSLKDSFFMKVTYQTDLPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGSDSFGGYPRTS
+ V + DLPYST ESRLQEEFSNFGEIAEVLLAKD++TKR KGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGS SFGGYPRTS
Subjt: TSLKDSFFMKVTYQTDLPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGSDSFGGYPRTS
Query: GPPKERPKLELEEVADCWY
GPPKERPK+EL+EVADCWY
Subjt: GPPKERPKLELEEVADCWY
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| XP_038883015.1 glycine-rich RNA-binding protein GRP2A isoform X2 [Benincasa hispida] | 2.4e-64 | 63.47 | Show/hide |
Query: MWSATVSFPSLSNFQGPIILNSRLNCSKPQSLNLRASFFDYPLASRLMPIVIDAILFLWFVFQVLFLLIDYGGIYMSLADGSYNSLRFLAQSMTLIGLHF
MW+ATVSFPS+SN +GPI+ N+R + SK SLN RASF DYPLASRL +V FL+ FQ++F L I D +++
Subjt: MWSATVSFPSLSNFQGPIILNSRLNCSKPQSLNLRASFFDYPLASRLMPIVIDAILFLWFVFQVLFLLIDYGGIYMSLADGSYNSLRFLAQSMTLIGLHF
Query: TSLKDSFFMKVTYQTDLPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGSDSFGGYPRTS
DLPYST ESRLQEEFSNFGEIAEVLLAKD++TKR KGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGS SFGGYPRTS
Subjt: TSLKDSFFMKVTYQTDLPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGSDSFGGYPRTS
Query: GPPKERPKLELEEVADCWY
GPPKERPK+EL+EVADCWY
Subjt: GPPKERPKLELEEVADCWY
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| XP_038883016.1 organelle RRM domain-containing protein 6, chloroplastic isoform X3 [Benincasa hispida] | 2.7e-63 | 61.19 | Show/hide |
Query: MWSATVSFPSLSNFQGPIILNSRLNCSKPQSLNLRASFFDYPLASRLMPIVIDAILFLWFVFQVLFLLIDYGGIYMSLADGSYNSLRFLAQSMTLIGLHF
MW+ATVSFPS+SN +GPI+ N+R + SK SLN RASF DYPLASRL+ + S+ G +
Subjt: MWSATVSFPSLSNFQGPIILNSRLNCSKPQSLNLRASFFDYPLASRLMPIVIDAILFLWFVFQVLFLLIDYGGIYMSLADGSYNSLRFLAQSMTLIGLHF
Query: TSLKDSFFMKVTYQTDLPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGSDSFGGYPRTS
S++ V + DLPYST ESRLQEEFSNFGEIAEVLLAKD++TKR KGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGS SFGGYPRTS
Subjt: TSLKDSFFMKVTYQTDLPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGSDSFGGYPRTS
Query: GPPKERPKLELEEVADCWY
GPPKERPK+EL+EVADCWY
Subjt: GPPKERPKLELEEVADCWY
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KL21 RRM domain-containing protein | 4.9e-55 | 56.05 | Show/hide |
Query: MWSATVSFPSLSNFQGPIILNSRLNCSKPQSLNLRASFFDYPLASRLMPIVIDAILFLWFVFQVLFLLIDYGGIYMSLADGSYNSLRFLAQSMTLIGLHF
MW+ TVSFPS+SN +GPI N+RL S SLNLRASFFDYPLASRLM
Subjt: MWSATVSFPSLSNFQGPIILNSRLNCSKPQSLNLRASFFDYPLASRLMPIVIDAILFLWFVFQVLFLLIDYGGIYMSLADGSYNSLRFLAQSMTLIGLHF
Query: TSLKDSFFMKVTYQTDLPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGSDSFGGYPRTS
+LPYSTNESRLQEEFSNFGEIAEVLLAKDR TKR KGYAFIQYTCQDDAMLALE MDCK FDGRMIYVE+A PGS SFGGYPR S
Subjt: TSLKDSFFMKVTYQTDLPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGSDSFGGYPRTS
Query: GPPKERP----KLELEEVADCWY
GPPKERP ++ E+VADCWY
Subjt: GPPKERP----KLELEEVADCWY
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| A0A1S3AYG0 glycine-rich RNA-binding protein 4, mitochondrial | 5.2e-57 | 56.62 | Show/hide |
Query: MWSATVSFPSLSNFQGPIILNSRLNCSKPQSLNLRASFFDYPLASRLMPIVIDAILFLWFVFQVLFLLIDYGGIYMSLADGSYNSLRFLAQSMTLIGLHF
MW+ TVS PS+SN +GP+ N+ L S SLNLRASFFDYPLASRLM
Subjt: MWSATVSFPSLSNFQGPIILNSRLNCSKPQSLNLRASFFDYPLASRLMPIVIDAILFLWFVFQVLFLLIDYGGIYMSLADGSYNSLRFLAQSMTLIGLHF
Query: TSLKDSFFMKVTYQTDLPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGSDSFGGYPRTS
+LPYSTNESRLQEEFSNFGEIAEVLLAKDR TKR KGYAFIQYTCQDDAMLALENMDCK FDGR IYVE+AKPGS SFGGYPRTS
Subjt: TSLKDSFFMKVTYQTDLPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGSDSFGGYPRTS
Query: GPPKERPKLELEEVADCWY
GPPKERP +E E++ADCWY
Subjt: GPPKERPKLELEEVADCWY
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| A0A6J1CXC0 glycine-rich RNA-binding protein 4, mitochondrial | 7.6e-56 | 56.16 | Show/hide |
Query: MWSATVSFPSLSNFQGPIILNSRLNCSKPQSLNLRASFFDYPLASRLMPIVIDAILFLWFVFQVLFLLIDYGGIYMSLADGSYNSLRFLAQSMTLIGLHF
MW++TVSFP L N + PI+L++ + + QSLNLRASFFDYPLASR+M
Subjt: MWSATVSFPSLSNFQGPIILNSRLNCSKPQSLNLRASFFDYPLASRLMPIVIDAILFLWFVFQVLFLLIDYGGIYMSLADGSYNSLRFLAQSMTLIGLHF
Query: TSLKDSFFMKVTYQTDLPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGSDSFGGYPRTS
+LPYST+E RLQEEFS+FGE+AEVLLAKDRVTKR +GYAFIQYTCQDDAMLALENMD KKFDGR IYVE+A+PGSDSFGGYPRTS
Subjt: TSLKDSFFMKVTYQTDLPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGSDSFGGYPRTS
Query: GPPKERPKLELEEVADCWY
GPPKERPKLELEEVADCWY
Subjt: GPPKERPKLELEEVADCWY
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| A0A6J1EGU7 small RNA-binding protein 11, chloroplastic | 2.6e-56 | 58.82 | Show/hide |
Query: MWSATVSFPSLSNFQGPIILNSRLNCSKPQSLNLRASFFDYPLASRLMPIVIDAILFLWFVFQVLFLLIDYGGIYMSLADGSYNSLRFLAQSMTLIGLHF
MW+ATVSFPSLSN +GPI L++RL+ SK QSLNLRASF DYPLASRLM
Subjt: MWSATVSFPSLSNFQGPIILNSRLNCSKPQSLNLRASFFDYPLASRLMPIVIDAILFLWFVFQVLFLLIDYGGIYMSLADGSYNSLRFLAQSMTLIGLHF
Query: TSLKDSFFMKVTYQTDLPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGSDSFGGYPRTS
+LPYSTNE+RLQEEFSNFGEIAEVLLAKDR+TK KGYAFIQYT QDDAMLALENMDCKKFDGR IYVELAKPGS SF GYP TS
Subjt: TSLKDSFFMKVTYQTDLPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGSDSFGGYPRTS
Query: GPPKER--PKLELEEVADCWY
GPPKER PKL EEVADCWY
Subjt: GPPKER--PKLELEEVADCWY
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| A0A6J1IJY1 small RNA-binding protein 11, chloroplastic | 8.1e-58 | 59.73 | Show/hide |
Query: MWSATVSFPSLSNFQGPIILNSRLNCSKPQSLNLRASFFDYPLASRLMPIVIDAILFLWFVFQVLFLLIDYGGIYMSLADGSYNSLRFLAQSMTLIGLHF
MW+ATVSFPSLSN +GPI LN+RL+ SK QSLNLRASF DYPLASRLM
Subjt: MWSATVSFPSLSNFQGPIILNSRLNCSKPQSLNLRASFFDYPLASRLMPIVIDAILFLWFVFQVLFLLIDYGGIYMSLADGSYNSLRFLAQSMTLIGLHF
Query: TSLKDSFFMKVTYQTDLPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGSDSFGGYPRTS
+LPYSTNE+RLQEEFSNFGEIAEVLLAKDR+TK KGYAFIQYT QDDAMLALENMDCKKFDGR IYVELAKPGS SFGGYP TS
Subjt: TSLKDSFFMKVTYQTDLPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGSDSFGGYPRTS
Query: GPPKER--PKLELEEVADCWY
GPPKER PKL EEVADCWY
Subjt: GPPKER--PKLELEEVADCWY
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P60826 Cold-inducible RNA-binding protein | 1.2e-10 | 43.42 | Show/hide |
Query: LPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGSDS
L + TNE L++ FS +G+I+EV++ KDR T+RS+G+ F+ + DDA A+ M+ K DGR I V+ A SD+
Subjt: LPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGSDS
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| Q8L440 Organelle RRM domain-containing protein 1, chloroplastic | 3.2e-11 | 43.59 | Show/hide |
Query: KVTYQTDLPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAK
K + T L + T+E L+ F FGE+ EV + D+++KRSKGYAF++YT ++ A AL+ M+ K +G MI V++AK
Subjt: KVTYQTDLPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAK
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| Q9DED4 Cold-inducible RNA-binding protein B | 1.1e-11 | 45.68 | Show/hide |
Query: LPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELA-KPGSDSFGGY
L + TNE L++ FS +G+I+EV++ KDR TKRS+G+ F+ + DDA A+ M+ K DGR I V+ A K D GGY
Subjt: LPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELA-KPGSDSFGGY
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| Q9FX45 Organelle RRM domain-containing protein 6, chloroplastic | 3.8e-12 | 37.11 | Show/hide |
Query: YQTDLPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGSDSFGGYPRTSGP-PKERPK
Y + L + T E L++ F FG + + + D+V R KG+AF++Y +++AM A++ M K DGR+I+VE AK SD PR P P+ +P+
Subjt: YQTDLPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGSDSFGGYPRTSGP-PKERPK
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| Q9LIS2 Glycine-rich RNA-binding protein 4, mitochondrial | 3.2e-11 | 40.96 | Show/hide |
Query: LPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGS----DSFGG
L + T++S L++ F++FGE+ E + DR T RS+G+ F+ ++C+D A A++ MD K+ +GR I V LA S SFGG
Subjt: LPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGS----DSFGG
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G73530.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 2.7e-13 | 37.11 | Show/hide |
Query: YQTDLPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGSDSFGGYPRTSGP-PKERPK
Y + L + T E L++ F FG + + + D+V R KG+AF++Y +++AM A++ M K DGR+I+VE AK SD PR P P+ +P+
Subjt: YQTDLPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGSDSFGGYPRTSGP-PKERPK
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| AT3G20930.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 2.3e-12 | 43.59 | Show/hide |
Query: KVTYQTDLPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAK
K + T L + T+E L+ F FGE+ EV + D+++KRSKGYAF++YT ++ A AL+ M+ K +G MI V++AK
Subjt: KVTYQTDLPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAK
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| AT3G23830.1 glycine-rich RNA-binding protein 4 | 2.3e-12 | 40.96 | Show/hide |
Query: LPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGS----DSFGG
L + T++S L++ F++FGE+ E + DR T RS+G+ F+ ++C+D A A++ MD K+ +GR I V LA S SFGG
Subjt: LPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGS----DSFGG
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| AT3G23830.2 glycine-rich RNA-binding protein 4 | 2.3e-12 | 40.96 | Show/hide |
Query: LPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGS----DSFGG
L + T++S L++ F++FGE+ E + DR T RS+G+ F+ ++C+D A A++ MD K+ +GR I V LA S SFGG
Subjt: LPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGRMIYVELAKPGS----DSFGG
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| AT4G20030.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 3.4e-32 | 52.45 | Show/hide |
Query: FLAQSMTL---IGLHFTSLKDSFF-----MKVTYQTDLPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGR
F+A S +L L F +K S F K+ + +LP+ST+E L+ EFS FGEIAEV L KD KRSKGYAFIQ+T QDDA LA+E MD + ++GR
Subjt: FLAQSMTL---IGLHFTSLKDSFF-----MKVTYQTDLPYSTNESRLQEEFSNFGEIAEVLLAKDRVTKRSKGYAFIQYTCQDDAMLALENMDCKKFDGR
Query: MIYVELAKPGSDSFGGYPRTSGPPKERPKLE---LEEVADCWY
MIY+++AKPG F G PRTSGPP++ + E +EVADCWY
Subjt: MIYVELAKPGSDSFGGYPRTSGPPKERPKLE---LEEVADCWY
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