; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0014157 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014157
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptioncytochrome c6, chloroplastic
Genome locationchr1:55754041..55758067
RNA-Seq ExpressionLag0014157
SyntenyLag0014157
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0005506 - iron ion binding (molecular function)
GO:0009055 - electron transfer activity (molecular function)
GO:0020037 - heme binding (molecular function)
InterPro domainsIPR009056 - Cytochrome c-like domain
IPR023655 - Cytochrome c6
IPR036909 - Cytochrome c-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594380.1 Cytochrome c6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]5.9e-7185.09Show/hide
Query:  MHLLSVISDFSPSPHCFPVKGERRTAVCQMHRQVKILKTLAPPLIAVLIALSPVNKTP-GCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFT
        M  LSV S FS SPHCFP++ +RRTAVCQM RQVKILKTLAPPLIAVLIAL P+NKTP GC ALAQ+AEIERGGALFS ACIGCHD GGNIIQPGATLF+
Subjt:  MHLLSVISDFSPSPHCFPVKGERRTAVCQMHRQVKILKTLAPPLIAVLIALSPVNKTP-GCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFT

Query:  SDLERNGADSEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKSNTD
        SDLERN ADSEEEIY ITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVK   D
Subjt:  SDLERNGADSEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKSNTD

XP_022926876.1 cytochrome c6, chloroplastic [Cucurbita moschata]1.1e-7483.53Show/hide
Query:  MHLLSVISDFSPSPHCFPVKGERRTAVCQMHRQVKILKTLAPPLIAVLIALSPVNKTPGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTS
        M  LSV SDFS SPHCFP+K +RRTAVCQM RQVKILKTLAPPLIAVLIAL P+NKTPGC ALAQ+AEIERGGALFS ACIGCHD GGNIIQPGATLF+S
Subjt:  MHLLSVISDFSPSPHCFPVKGERRTAVCQMHRQVKILKTLAPPLIAVLIALSPVNKTPGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTS

Query:  DLERNGADSEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKSNTDSSQQCVYPSP
        DLERNGADSEEEIY ITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVK   D      +P+P
Subjt:  DLERNGADSEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKSNTDSSQQCVYPSP

XP_023003546.1 cytochrome c6, chloroplastic [Cucurbita maxima]1.6e-7382.35Show/hide
Query:  MHLLSVISDFSPSPHCFPVKGERRTAVCQMHRQVKILKTLAPPLIAVLIALSPVNKTPGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTS
        M LLSVISDFS SPHCF +K +RRT VC+M RQVK LK LAPPLIAVLIAL P+NKTPGC ALAQ+AEIERGGALFS ACIGCHDGGGNIIQPGATLF+S
Subjt:  MHLLSVISDFSPSPHCFPVKGERRTAVCQMHRQVKILKTLAPPLIAVLIALSPVNKTPGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTS

Query:  DLERNGADSEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKSNTDSSQQCVYPSP
        DLERNGADSEEEIY ITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVK   D      +P+P
Subjt:  DLERNGADSEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKSNTDSSQQCVYPSP

XP_023517564.1 cytochrome c6, chloroplastic [Cucurbita pepo subsp. pepo]5.7e-7482.94Show/hide
Query:  MHLLSVISDFSPSPHCFPVKGERRTAVCQMHRQVKILKTLAPPLIAVLIALSPVNKTPGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTS
        M  LSV SDFS SPHCFP+K +RRTAVCQM RQV ILKTLAPPLIAVLIAL P+NKTPGC ALAQ+AEIERGGALFS ACIGCHD GGNIIQPGATLF+S
Subjt:  MHLLSVISDFSPSPHCFPVKGERRTAVCQMHRQVKILKTLAPPLIAVLIALSPVNKTPGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTS

Query:  DLERNGADSEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKSNTDSSQQCVYPSP
        DLERNGADSEEEIY ITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVK   D      +P+P
Subjt:  DLERNGADSEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKSNTDSSQQCVYPSP

XP_038877732.1 cytochrome c6, chloroplastic [Benincasa hispida]4.3e-7480.59Show/hide
Query:  MHLLSVISDFSPSPHCFPVKGERRTAVCQMHRQVKILKTLAPPLIAVLIALSPVNKTPGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTS
        MHLLS  S+F P+PHCFP+K +RRT VCQ+  QVKIL +LAPPLIAV +ALSP+N+TPGCLALAQTAEIERGGALF+QACIGCHDGGGNIIQPGATLF+S
Subjt:  MHLLSVISDFSPSPHCFPVKGERRTAVCQMHRQVKILKTLAPPLIAVLIALSPVNKTPGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTS

Query:  DLERNGADSEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKSNTDSSQQCVYPSP
        DLERNGAD+EEEIY ITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVK   D      +P+P
Subjt:  DLERNGADSEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKSNTDSSQQCVYPSP

TrEMBL top hitse value%identityAlignment
A0A0A0KPD1 Cytochrome c domain-containing protein2.0e-6177.63Show/hide
Query:  VKGERRTAVCQMHRQVKILKTLAPPLIAVLIALSPVNKTPGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADSEEEIYHITY
        + G+RRT VCQ+  QVKILK L PPLIA+L+ LSP+NKT GCL LA+T EIERGGALF+Q+CIGCHDGGGNIIQPGATLF+SDLERNGAD+EEEIY ITY
Subjt:  VKGERRTAVCQMHRQVKILKTLAPPLIAVLIALSPVNKTPGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADSEEEIYHITY

Query:  YGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKSNTDSSQQCVYPSP
         GKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVK   D      +P+P
Subjt:  YGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKSNTDSSQQCVYPSP

A0A1S3AYD3 cytochrome c6, chloroplastic7.0e-7077.46Show/hide
Query:  MHLLSVISDF---SPSPHCFPVKGERRTAVCQMHRQVKILKTLAPPLIAVLIALSPVNKTPGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATL
        M LLSV SDF     SPH FP+ G RRT VCQ+   VKIL+TLAPPLIA+L+ LSP+NKTPGCL LA+T EIERGGALF+QACIGCHDGGGNIIQPGATL
Subjt:  MHLLSVISDF---SPSPHCFPVKGERRTAVCQMHRQVKILKTLAPPLIAVLIALSPVNKTPGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATL

Query:  FTSDLERNGADSEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKSNTDSSQQCVYPSP
        F+SDLERNGAD+EEEIY ITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVK   D      +P+P
Subjt:  FTSDLERNGADSEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKSNTDSSQQCVYPSP

A0A6J1CXZ2 cytochrome c6, chloroplastic2.4e-7083.23Show/hide
Query:  MHLLSVISDFSPSPHCFPVKGERRTAVCQMH-RQVKILKTLAPPLIAVLIALSPVNKTPGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFT
        MHLLS ISDFS + HCF +KGER TAVCQ   +Q+KI K+ APPLIAVLIALSP+ KTPGC  LAQT EIERGGALFSQ+CIGCHDGGGNIIQPGATLF+
Subjt:  MHLLSVISDFSPSPHCFPVKGERRTAVCQMH-RQVKILKTLAPPLIAVLIALSPVNKTPGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFT

Query:  SDLERNGADSEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKSNTD
        SDLERNGAD EEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQE+EIRLLAKFVK   D
Subjt:  SDLERNGADSEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKSNTD

A0A6J1EG38 cytochrome c6, chloroplastic5.5e-7583.53Show/hide
Query:  MHLLSVISDFSPSPHCFPVKGERRTAVCQMHRQVKILKTLAPPLIAVLIALSPVNKTPGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTS
        M  LSV SDFS SPHCFP+K +RRTAVCQM RQVKILKTLAPPLIAVLIAL P+NKTPGC ALAQ+AEIERGGALFS ACIGCHD GGNIIQPGATLF+S
Subjt:  MHLLSVISDFSPSPHCFPVKGERRTAVCQMHRQVKILKTLAPPLIAVLIALSPVNKTPGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTS

Query:  DLERNGADSEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKSNTDSSQQCVYPSP
        DLERNGADSEEEIY ITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVK   D      +P+P
Subjt:  DLERNGADSEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKSNTDSSQQCVYPSP

A0A6J1KPJ4 cytochrome c6, chloroplastic8.0e-7482.35Show/hide
Query:  MHLLSVISDFSPSPHCFPVKGERRTAVCQMHRQVKILKTLAPPLIAVLIALSPVNKTPGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTS
        M LLSVISDFS SPHCF +K +RRT VC+M RQVK LK LAPPLIAVLIAL P+NKTPGC ALAQ+AEIERGGALFS ACIGCHDGGGNIIQPGATLF+S
Subjt:  MHLLSVISDFSPSPHCFPVKGERRTAVCQMHRQVKILKTLAPPLIAVLIALSPVNKTPGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTS

Query:  DLERNGADSEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKSNTDSSQQCVYPSP
        DLERNGADSEEEIY ITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVK   D      +P+P
Subjt:  DLERNGADSEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKSNTDSSQQCVYPSP

SwissProt top hitse value%identityAlignment
P00115 Cytochrome c69.6e-0833.61Show/hide
Query:  LKTLAPPLIAVLIALSPVNKTPGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADSEEEIYHITYYGKGRMPGFGENCKPRGQ
        +KTL   L   L+ L+    TP     A  A+I  G  +FS  C  CH GGGN++    TL    LE+ G +S + I +    GK  MP           
Subjt:  LKTLAPPLIAVLIALSPVNKTPGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADSEEEIYHITYYGKGRMPGFGENCKPRGQ

Query:  CTFGPRLQEEEIRLLAKFV
          FG RL E +I  +A +V
Subjt:  CTFGPRLQEEEIRLLAKFV

P07497 Cytochrome c61.5e-0830.77Show/hide
Query:  KILKTLAPPLIAVLIALSPVNKTPGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADSEEEIYHITYYGKGRMPGFGENCKPR
        +IL T    L+ +L  ++P          AQ A++  GG +FS  C  CH GG N++ P  TL  +DL++ G  S E I      GKG MP FG      
Subjt:  KILKTLAPPLIAVLIALSPVNKTPGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADSEEEIYHITYYGKGRMPGFGENCKPR

Query:  GQCTFGPRLQEEEIRLLAKFVKSNTDSSQQ
               +L  ++I  +A +V   ++   Q
Subjt:  GQCTFGPRLQEEEIRLLAKFVKSNTDSSQQ

P0A3X9 Cytochrome c61.2e-0735.45Show/hide
Query:  AVLIALSPVNKTPGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADSEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQE
        A+ IAL  V+ TP  LA    A++  G  +FS  C  CH GGGN++    TL    LE+ G  SE+ I +   +GK  MP             F  RL +
Subjt:  AVLIALSPVNKTPGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADSEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQE

Query:  EEIRLLAKFV
        E+I+ +A +V
Subjt:  EEIRLLAKFV

P25935 Cytochrome c61.5e-0830.77Show/hide
Query:  KILKTLAPPLIAVLIALSPVNKTPGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADSEEEIYHITYYGKGRMPGFGENCKPR
        +IL T    L+ +L  ++P          AQ A++  GG +FS  C  CH GG N++ P  TL  +DL++ G  S E I      GKG MP FG      
Subjt:  KILKTLAPPLIAVLIALSPVNKTPGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADSEEEIYHITYYGKGRMPGFGENCKPR

Query:  GQCTFGPRLQEEEIRLLAKFVKSNTDSSQQ
               +L  ++I  +A +V   ++   Q
Subjt:  GQCTFGPRLQEEEIRLLAKFVKSNTDSSQQ

Q93VA3 Cytochrome c6, chloroplastic8.0e-4771.2Show/hide
Query:  ILKTLAPPLIAVLIALSPVNKTPGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADSEEEIYHITYYGKGRMPGFGENCKPRG
        +LK LAPPL AVL+A+SP+   P   +L QT +I+RG  LF++ACIGCHD GGNIIQPGATLFT DLERNG D+EEEIY +TY+GKGRMPGFGE C PRG
Subjt:  ILKTLAPPLIAVLIALSPVNKTPGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADSEEEIYHITYYGKGRMPGFGENCKPRG

Query:  QCTFGPRLQEEEIRLLAKFVKSNTD
        QCTFGPRLQ+EEI+LLA+FVK   D
Subjt:  QCTFGPRLQEEEIRLLAKFVKSNTD

Arabidopsis top hitse value%identityAlignment
AT5G45040.1 Cytochrome c5.7e-4871.2Show/hide
Query:  ILKTLAPPLIAVLIALSPVNKTPGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADSEEEIYHITYYGKGRMPGFGENCKPRG
        +LK LAPPL AVL+A+SP+   P   +L QT +I+RG  LF++ACIGCHD GGNIIQPGATLFT DLERNG D+EEEIY +TY+GKGRMPGFGE C PRG
Subjt:  ILKTLAPPLIAVLIALSPVNKTPGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADSEEEIYHITYYGKGRMPGFGENCKPRG

Query:  QCTFGPRLQEEEIRLLAKFVKSNTD
        QCTFGPRLQ+EEI+LLA+FVK   D
Subjt:  QCTFGPRLQEEEIRLLAKFVKSNTD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCTTCTCTCCGTAATTTCAGATTTTAGCCCTAGTCCCCATTGCTTTCCAGTAAAGGGAGAGCGACGAACAGCAGTTTGTCAAATGCATAGACAAGTTAAGATTCT
CAAGACCTTGGCCCCCCCTCTGATTGCTGTGCTTATAGCATTATCTCCTGTCAACAAAACCCCAGGATGTCTTGCGCTTGCCCAAACGGCAGAAATAGAAAGAGGAGGTG
CTTTGTTTAGTCAAGCTTGCATTGGCTGCCATGATGGAGGGGGAAACATAATTCAGCCCGGTGCGACACTCTTTACAAGTGATCTTGAAAGAAATGGAGCTGATTCCGAA
GAGGAGATCTACCATATTACATATTATGGGAAAGGAAGAATGCCTGGTTTTGGTGAGAACTGCAAGCCAAGGGGTCAGTGCACATTTGGTCCCCGTTTGCAGGAGGAAGA
GATTAGGCTTTTGGCGAAGTTTGTAAAGTCCAACACCGACTCATCACAACAATGTGTTTACCCTTCCCCAGATCATGCTGGCAGCTTCAACCTCTCAAACCAACACATGT
TACAAGACCAGCACAAACACAGAGAGGGAGAGCCAAACAAGTTAAGAAAGCTTGAGGGCTGCGTCAAAGATTTGAAGGAGAAGGAAAAAGAACAAGCCTGTACGAGCTCT
CGTGACTGTCTGTGTGTACAGAGTCGTCTATCCTTTGAGTTGGCACAGCGGTTGAAGAGTAGTTTATATAATGCAGCTTTTCTGCTGTTGCTTACAGCTATTTTCCGCTG
A
mRNA sequenceShow/hide mRNA sequence
ATGCATCTTCTCTCCGTAATTTCAGATTTTAGCCCTAGTCCCCATTGCTTTCCAGTAAAGGGAGAGCGACGAACAGCAGTTTGTCAAATGCATAGACAAGTTAAGATTCT
CAAGACCTTGGCCCCCCCTCTGATTGCTGTGCTTATAGCATTATCTCCTGTCAACAAAACCCCAGGATGTCTTGCGCTTGCCCAAACGGCAGAAATAGAAAGAGGAGGTG
CTTTGTTTAGTCAAGCTTGCATTGGCTGCCATGATGGAGGGGGAAACATAATTCAGCCCGGTGCGACACTCTTTACAAGTGATCTTGAAAGAAATGGAGCTGATTCCGAA
GAGGAGATCTACCATATTACATATTATGGGAAAGGAAGAATGCCTGGTTTTGGTGAGAACTGCAAGCCAAGGGGTCAGTGCACATTTGGTCCCCGTTTGCAGGAGGAAGA
GATTAGGCTTTTGGCGAAGTTTGTAAAGTCCAACACCGACTCATCACAACAATGTGTTTACCCTTCCCCAGATCATGCTGGCAGCTTCAACCTCTCAAACCAACACATGT
TACAAGACCAGCACAAACACAGAGAGGGAGAGCCAAACAAGTTAAGAAAGCTTGAGGGCTGCGTCAAAGATTTGAAGGAGAAGGAAAAAGAACAAGCCTGTACGAGCTCT
CGTGACTGTCTGTGTGTACAGAGTCGTCTATCCTTTGAGTTGGCACAGCGGTTGAAGAGTAGTTTATATAATGCAGCTTTTCTGCTGTTGCTTACAGCTATTTTCCGCTG
A
Protein sequenceShow/hide protein sequence
MHLLSVISDFSPSPHCFPVKGERRTAVCQMHRQVKILKTLAPPLIAVLIALSPVNKTPGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADSE
EEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKSNTDSSQQCVYPSPDHAGSFNLSNQHMLQDQHKHREGEPNKLRKLEGCVKDLKEKEKEQACTSS
RDCLCVQSRLSFELAQRLKSSLYNAAFLLLLTAIFR