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Lag0014168 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014168
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionWD_REPEATS_REGION domain-containing protein
Genome locationchr1:55864855..55865375
RNA-Seq ExpressionLag0014168
SyntenyLag0014168
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR011047 - Quinoprotein alcohol dehydrogenase-like superfamily
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022925587.1 uncharacterized protein LOC111432975 [Cucurbita moschata]4.3e-5390Show/hide
Query:  VRLYDHRLIQRGAVQTYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGRFLKRRDGYLGCEDHSSGAWLGS
        VRLYDHRLIQRGAVQTYD HANSHTRI+LGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGRF + ++GYLGC DHS GAWLGS
Subjt:  VRLYDHRLIQRGAVQTYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGRFLKRRDGYLGCEDHSSGAWLGS

Query:  QRGLHYVSWP
        Q GLHYVS+P
Subjt:  QRGLHYVSWP

XP_022978597.1 uncharacterized protein LOC111478534 [Cucurbita maxima]5.0e-5490.91Show/hide
Query:  VRLYDHRLIQRGAVQTYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGRFLKRRDGYLGCEDHSSGAWLGS
        VRLYDHRLIQRGAVQTYDGHANSHTRI+LGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGR  + ++GYLGC DHSSGAWLGS
Subjt:  VRLYDHRLIQRGAVQTYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGRFLKRRDGYLGCEDHSSGAWLGS

Query:  QRGLHYVSWP
        Q GLHYVS+P
Subjt:  QRGLHYVSWP

XP_023544797.1 uncharacterized protein LOC111804281 [Cucurbita pepo subsp. pepo]7.8e-5591.82Show/hide
Query:  VRLYDHRLIQRGAVQTYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGRFLKRRDGYLGCEDHSSGAWLGS
        VRLYDHRLIQRGAVQTYDGHANSHTRI+LGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGRF + ++GYLGC DHSSGAWLGS
Subjt:  VRLYDHRLIQRGAVQTYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGRFLKRRDGYLGCEDHSSGAWLGS

Query:  QRGLHYVSWP
        Q GLHYVS+P
Subjt:  QRGLHYVSWP

XP_031743496.1 uncharacterized protein LOC101220880 isoform X2 [Cucumis sativus]1.2e-5286.73Show/hide
Query:  VRLYDHRLIQRGAVQTYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRA-GRFLKRRDGYLGCEDHSSGAWLG
        V+LYDHRLIQRGAVQTYDGH NSHTR++LGVDPTETFV SGGEDC FRLWNIKSGKLIFEDKF DAVPSTICWRRA GRF +  DGYLGCEDHSSGAWLG
Subjt:  VRLYDHRLIQRGAVQTYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRA-GRFLKRRDGYLGCEDHSSGAWLG

Query:  SQRGLHYVSWPGT
        SQ G+HYVSWP T
Subjt:  SQRGLHYVSWPGT

XP_038877526.1 uncharacterized protein LOC120069787 [Benincasa hispida]3.8e-5490.18Show/hide
Query:  VRLYDHRLIQRGAVQTYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGRFLKRRDGYLGCEDHSSGAWLGS
        VRLYDHRLIQRGAVQTYDGHANSHTRI+LGVDPTETFVASGGED NFRLWNIKSGKLIFEDKFVDAVPSTICWRR  RF + +DGYLGCEDHSSGAWLGS
Subjt:  VRLYDHRLIQRGAVQTYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGRFLKRRDGYLGCEDHSSGAWLGS

Query:  QRGLHYVSWPGT
          GLHYVSWP T
Subjt:  QRGLHYVSWPGT

TrEMBL top hitse value%identityAlignment
A0A0A0KMD9 WD_REPEATS_REGION domain-containing protein6.0e-5386.73Show/hide
Query:  VRLYDHRLIQRGAVQTYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRA-GRFLKRRDGYLGCEDHSSGAWLG
        V+LYDHRLIQRGAVQTYDGH NSHTR++LGVDPTETFV SGGEDC FRLWNIKSGKLIFEDKF DAVPSTICWRRA GRF +  DGYLGCEDHSSGAWLG
Subjt:  VRLYDHRLIQRGAVQTYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRA-GRFLKRRDGYLGCEDHSSGAWLG

Query:  SQRGLHYVSWPGT
        SQ G+HYVSWP T
Subjt:  SQRGLHYVSWPGT

A0A6J1CYF0 uncharacterized protein LOC111015736 isoform X31.0e-5287.5Show/hide
Query:  VRLYDHRLIQRGAVQTYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGRFLKRRDGYLGCEDHSSGAWLGS
        VRLYDHRLIQRGAVQTYDGHANSHTRI+LGVDP+ETFV SGGEDC FRLWNIKSGKLIFEDKFVDAVPSTICWRRA RFL+ +DGY G E+H SGAWLGS
Subjt:  VRLYDHRLIQRGAVQTYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGRFLKRRDGYLGCEDHSSGAWLGS

Query:  QRGLHYVSWPGT
        Q GLHYVSWP T
Subjt:  QRGLHYVSWPGT

A0A6J1CYV5 uncharacterized protein LOC111015736 isoform X21.0e-5287.5Show/hide
Query:  VRLYDHRLIQRGAVQTYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGRFLKRRDGYLGCEDHSSGAWLGS
        VRLYDHRLIQRGAVQTYDGHANSHTRI+LGVDP+ETFV SGGEDC FRLWNIKSGKLIFEDKFVDAVPSTICWRRA RFL+ +DGY G E+H SGAWLGS
Subjt:  VRLYDHRLIQRGAVQTYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGRFLKRRDGYLGCEDHSSGAWLGS

Query:  QRGLHYVSWPGT
        Q GLHYVSWP T
Subjt:  QRGLHYVSWPGT

A0A6J1EC37 uncharacterized protein LOC1114329752.1e-5390Show/hide
Query:  VRLYDHRLIQRGAVQTYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGRFLKRRDGYLGCEDHSSGAWLGS
        VRLYDHRLIQRGAVQTYD HANSHTRI+LGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGRF + ++GYLGC DHS GAWLGS
Subjt:  VRLYDHRLIQRGAVQTYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGRFLKRRDGYLGCEDHSSGAWLGS

Query:  QRGLHYVSWP
        Q GLHYVS+P
Subjt:  QRGLHYVSWP

A0A6J1ILI1 uncharacterized protein LOC1114785342.4e-5490.91Show/hide
Query:  VRLYDHRLIQRGAVQTYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGRFLKRRDGYLGCEDHSSGAWLGS
        VRLYDHRLIQRGAVQTYDGHANSHTRI+LGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGR  + ++GYLGC DHSSGAWLGS
Subjt:  VRLYDHRLIQRGAVQTYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGRFLKRRDGYLGCEDHSSGAWLGS

Query:  QRGLHYVSWP
        Q GLHYVS+P
Subjt:  QRGLHYVSWP

SwissProt top hitse value%identityAlignment
A0A1P8AW69 Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.15.0e-0437.1Show/hide
Query:  VRLYDHRLIQRGAVQTYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDK
        +R++D R  ++G +QTY GH    + IE    P   +V SGG D   ++W++ +GKL+ E K
Subjt:  VRLYDHRLIQRGAVQTYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDK

A6RUL1 Eukaryotic translation initiation factor 3 subunit I1.0e-0436.84Show/hide
Query:  TYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGRFL---KRRDGYLG
        TY GH  +   ++  VDPT T +ASG  D   RLW++K+GK +    F  AV        A + L   ++R G+LG
Subjt:  TYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGRFL---KRRDGYLG

A7EF03 Eukaryotic translation initiation factor 3 subunit I1.0e-0436.84Show/hide
Query:  TYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGRFL---KRRDGYLG
        TY GH  +   ++  VDPT T +ASG  D   RLW++K+GK +    F  AV        A + L   ++R G+LG
Subjt:  TYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGRFL---KRRDGYLG

Q2GTM8 Eukaryotic translation initiation factor 3 subunit I2.9e-0446.15Show/hide
Query:  TYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAV
        TY GH  +   I+  VDPT T +ASG  D   RLW+IK+GK +    F  AV
Subjt:  TYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAV

Q7RXH4 Eukaryotic translation initiation factor 3 subunit I3.4e-0538.16Show/hide
Query:  TYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGRFL---KRRDGYLG
        TY GH  +   I+  VDPT T +ASG  D   RLW IK+G+L+    F  AV          + L   ++R G+LG
Subjt:  TYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGRFL---KRRDGYLG

Arabidopsis top hitse value%identityAlignment
AT1G11160.1 Transducin/WD40 repeat-like superfamily protein3.5e-0537.1Show/hide
Query:  VRLYDHRLIQRGAVQTYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDK
        +R++D R  ++G +QTY GH    + IE    P   +V SGG D   ++W++ +GKL+ E K
Subjt:  VRLYDHRLIQRGAVQTYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDK

AT1G61210.1 Transducin/WD40 repeat-like superfamily protein6.0e-0534.92Show/hide
Query:  VRLYDHRLIQRGAVQTYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKF
        ++++D R  ++G +QTY GH+   + I     P   +V SGG D   ++W++ +GKL+ E KF
Subjt:  VRLYDHRLIQRGAVQTYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKF

AT1G61210.2 Transducin/WD40 repeat-like superfamily protein6.0e-0534.92Show/hide
Query:  VRLYDHRLIQRGAVQTYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKF
        ++++D R  ++G +QTY GH+   + I     P   +V SGG D   ++W++ +GKL+ E KF
Subjt:  VRLYDHRLIQRGAVQTYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKF

AT5G17370.1 Transducin/WD40 repeat-like superfamily protein3.3e-2749.52Show/hide
Query:  VRLYDHRLIQRG-AVQTYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGRFLKRRDGYLGCEDHSSGAWLG
        ++LYD R+++RG  VQTY+GH NSHT IE G+DP+E F+ SGG+DC  R+W+IKSG+L+ E+KF ++VPS +CW    R   R+D          GAWLG
Subjt:  VRLYDHRLIQRG-AVQTYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGRFLKRRDGYLGCEDHSSGAWLG

Query:  SQRGL
        S+  +
Subjt:  SQRGL

AT5G23430.1 Transducin/WD40 repeat-like superfamily protein8.7e-0433.87Show/hide
Query:  VRLYDHRLIQRGAVQTYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDK
        ++++D R  ++G + TY GH        L   P   +V SGGED   ++W++ +GKL+ E K
Subjt:  VRLYDHRLIQRGAVQTYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCTACAGGTAAGACTTTATGATCATCGCCTTATCCAGAGAGGCGCTGTACAAACCTATGATGGGCATGCAAATTCACATACTCGTATAGAGCTTGGAGTTGATCC
CACTGAGACATTTGTCGCGTCTGGTGGAGAAGACTGCAACTTTCGTCTATGGAATATCAAGTCTGGTAAATTGATCTTTGAGGATAAGTTTGTTGATGCTGTTCCCTCAA
CCATATGCTGGCGAAGGGCTGGAAGATTTCTGAAAAGGCGGGATGGATACTTAGGTTGTGAAGATCATAGTTCGGGAGCATGGCTTGGGTCACAAAGAGGACTTCATTAT
GTGAGCTGGCCAGGGACATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTCTACAGGTAAGACTTTATGATCATCGCCTTATCCAGAGAGGCGCTGTACAAACCTATGATGGGCATGCAAATTCACATACTCGTATAGAGCTTGGAGTTGATCC
CACTGAGACATTTGTCGCGTCTGGTGGAGAAGACTGCAACTTTCGTCTATGGAATATCAAGTCTGGTAAATTGATCTTTGAGGATAAGTTTGTTGATGCTGTTCCCTCAA
CCATATGCTGGCGAAGGGCTGGAAGATTTCTGAAAAGGCGGGATGGATACTTAGGTTGTGAAGATCATAGTTCGGGAGCATGGCTTGGGTCACAAAGAGGACTTCATTAT
GTGAGCTGGCCAGGGACATGA
Protein sequenceShow/hide protein sequence
MFLQVRLYDHRLIQRGAVQTYDGHANSHTRIELGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGRFLKRRDGYLGCEDHSSGAWLGSQRGLHY
VSWPGT