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Lag0014382 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014382
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionLINE-1 reverse transcriptase-like
Genome locationchr12:172263..172977
RNA-Seq ExpressionLag0014382
SyntenyLag0014382
Gene Ontology termsGO:0034645 - cellular macromolecule biosynthetic process (biological process)
GO:0044271 - cellular nitrogen compound biosynthetic process (biological process)
GO:0090304 - nucleic acid metabolic process (biological process)
GO:0009527 - plastid outer membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0016757 - transferase activity, transferring glycosyl groups (molecular function)
GO:0016772 - transferase activity, transferring phosphorus-containing groups (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFZ06121.1 hypothetical protein Acr_18g0002910 [Actinidia rufa]3.3e-1954.44Show/hide
Query:  KLPAKVLAERSKKVMPSIISCSQSAFFEGRQILDPILIANEVVDEYRIKKKKGWILKLNLEKAFDCVDWDFLDEVFKLKAFNRKWINWIQ
        KL AKVLA R K+V+PS+IS SQSA   GRQILD +LIANE+++ ++  KK+G I K++  KA+DCV+W FL ++FK+    +KW +WIQ
Subjt:  KLPAKVLAERSKKVMPSIISCSQSAFFEGRQILDPILIANEVVDEYRIKKKKGWILKLNLEKAFDCVDWDFLDEVFKLKAFNRKWINWIQ

RVW49203.1 putative ribonuclease H protein [Vitis vinifera]1.0e-2048.6Show/hide
Query:  IEAEILGFFSSLYQKLPAKVLAERSKKVMPSIISCSQSAFFEGRQILDPILIANEVVDEYRIKKKKGWILKLNLEKAFDCVDWDFLDEVFKLKAFNRKWI
        ++ E+LGFF   Y++  AKVLA R KKV+  ++S SQ+AF EGRQILD  L+ANEV+D    +K+ G + KL+LEKA+D ++WDFL  V +   F  KWI
Subjt:  IEAEILGFFSSLYQKLPAKVLAERSKKVMPSIISCSQSAFFEGRQILDPILIANEVVDEYRIKKKKGWILKLNLEKAFDCVDWDFLDEVFKLKAFNRKWI

Query:  NWIQMED
          ++  D
Subjt:  NWIQMED

TYK06397.1 hypothetical protein E5676_scaffold163G00940 [Cucumis melo var. makuwa]3.5e-2468.6Show/hide
Query:  AKVLAERSKKVMPSIISCSQSAFFEGRQILDPILIANEVVDEYRIKKKKGWILKLNLEKAFDCVDWDFLDEVFKLKAFNRKWINWI
        AKVLA+R K VM SI S  Q+ F EGRQILDPI IANE V++YR KKKKGWILKL+LEKAFD VDW FL++V   K F++KWI+WI
Subjt:  AKVLAERSKKVMPSIISCSQSAFFEGRQILDPILIANEVVDEYRIKKKKGWILKLNLEKAFDCVDWDFLDEVFKLKAFNRKWINWI

XP_038903533.1 uncharacterized protein LOC120090100 [Benincasa hispida]3.1e-2572.62Show/hide
Query:  VLAERSKKVMPSIISCSQSAFFEGRQILDPILIANEVVDEYRIKKKKGWILKLNLEKAFDCVDWDFLDEVFKLKAFNRKWINWI
        VLAER K VMPSII+ SQSAF EGRQILDPILIANE V++YR+KKKKGWILKL++EKAF+ VDWDFL++V + K F++K I WI
Subjt:  VLAERSKKVMPSIISCSQSAFFEGRQILDPILIANEVVDEYRIKKKKGWILKLNLEKAFDCVDWDFLDEVFKLKAFNRKWINWI

XP_038905468.1 probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X1 [Benincasa hispida]3.1e-2564.89Show/hide
Query:  SSLYQKLPAKVLAERSKKVMPSIISCSQSAFFEGRQILDPILIANEVVDEYRIKKKKGWILKLNLEKAFDCVDWDFLDEVFKLKAFNRKWINWI
        S++  K+ AKVLAER KKVMPS+IS +QSAF EGRQILDP+LIANE V+ YR KKKK W+LKL+LEKAF  VDW FL++  K + F+ KW +WI
Subjt:  SSLYQKLPAKVLAERSKKVMPSIISCSQSAFFEGRQILDPILIANEVVDEYRIKKKKGWILKLNLEKAFDCVDWDFLDEVFKLKAFNRKWINWI

TrEMBL top hitse value%identityAlignment
A0A2K3MNH2 Cysteine-rich receptor-like protein kinase1.6e-1957.3Show/hide
Query:  KLPAKVLAERSKKVMPSIISCSQSAFFEGRQILDPILIANEVVDEYRIKKKKGWILKLNLEKAFDCVDWDFLDEVFKLKAFNRKWINWI
        K+ +KVLA R KKV+ S++S +QSAF  GRQILD ILIANE+VDE + KKK+ ++ K++ EKAFD VDW+FLD V +   F+ KW +WI
Subjt:  KLPAKVLAERSKKVMPSIISCSQSAFFEGRQILDPILIANEVVDEYRIKKKKGWILKLNLEKAFDCVDWDFLDEVFKLKAFNRKWINWI

A0A438EN81 Putative ribonuclease H protein5.0e-2148.6Show/hide
Query:  IEAEILGFFSSLYQKLPAKVLAERSKKVMPSIISCSQSAFFEGRQILDPILIANEVVDEYRIKKKKGWILKLNLEKAFDCVDWDFLDEVFKLKAFNRKWI
        ++ E+LGFF   Y++  AKVLA R KKV+  ++S SQ+AF EGRQILD  L+ANEV+D    +K+ G + KL+LEKA+D ++WDFL  V +   F  KWI
Subjt:  IEAEILGFFSSLYQKLPAKVLAERSKKVMPSIISCSQSAFFEGRQILDPILIANEVVDEYRIKKKKGWILKLNLEKAFDCVDWDFLDEVFKLKAFNRKWI

Query:  NWIQMED
          ++  D
Subjt:  NWIQMED

A0A5D3C3J5 Reverse transcriptase domain-containing protein1.7e-2468.6Show/hide
Query:  AKVLAERSKKVMPSIISCSQSAFFEGRQILDPILIANEVVDEYRIKKKKGWILKLNLEKAFDCVDWDFLDEVFKLKAFNRKWINWI
        AKVLA+R K VM SI S  Q+ F EGRQILDPI IANE V++YR KKKKGWILKL+LEKAFD VDW FL++V   K F++KWI+WI
Subjt:  AKVLAERSKKVMPSIISCSQSAFFEGRQILDPILIANEVVDEYRIKKKKGWILKLNLEKAFDCVDWDFLDEVFKLKAFNRKWINWI

A0A7J0G5R0 RRM domain-containing protein1.6e-1954.44Show/hide
Query:  KLPAKVLAERSKKVMPSIISCSQSAFFEGRQILDPILIANEVVDEYRIKKKKGWILKLNLEKAFDCVDWDFLDEVFKLKAFNRKWINWIQ
        KL AKVLA R K+V+PS+IS SQSA   GRQILD +LIANE+++ ++  KK+G I K++  KA+DCV+W FL ++FK+    +KW +WIQ
Subjt:  KLPAKVLAERSKKVMPSIISCSQSAFFEGRQILDPILIANEVVDEYRIKKKKGWILKLNLEKAFDCVDWDFLDEVFKLKAFNRKWINWIQ

A0A803PZS1 Uncharacterized protein1.5e-2054.55Show/hide
Query:  LGFFSSLYQKLPAKVLAERSKKVMPSIISCSQSAFFEGRQILDPILIANEVVDEYRIKKKKGWILKLNLEKAFDCVDWDFLDEVFKLKAFNRKWINWIQ
        +   +S+Y K+ AK LA R + V+   IS +Q AF EGRQILD +LIANE V+EYR + KKG++ K++LEKA+DCVDWDFLD V K K F   W  WI+
Subjt:  LGFFSSLYQKLPAKVLAERSKKVMPSIISCSQSAFFEGRQILDPILIANEVVDEYRIKKKKGWILKLNLEKAFDCVDWDFLDEVFKLKAFNRKWINWIQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G20520.1 RNA binding;RNA-directed DNA polymerases8.8e-1039.02Show/hide
Query:  LAERSKKVMPSIISCSQSAFFEGRQILDPILIANEVVDEYRIKK-KKGW-ILKLNLEKAFDCVDWDFLDEVFKLKAFNRKWI
        + ER K +M ++I  +Q++F  GR   D I+   E V   R KK  KGW +LKL+LEKA+D + WD+L++      F   W+
Subjt:  LAERSKKVMPSIISCSQSAFFEGRQILDPILIANEVVDEYRIKK-KKGW-ILKLNLEKAFDCVDWDFLDEVFKLKAFNRKWI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTACTGCTCCTCTCATATGGTGAAATTGAAGCTGAAATTCTTGGCTTTTTCTCTTCTTTATATCAGAAGCTTCCGGCTAAGGTGCTTGCTGAAAGGTCAAAGAAAGT
AATGCCCTCGATAATTTCATGCTCCCAAAGTGCATTTTTTGAAGGAAGACAGATTTTAGACCCAATTCTCATTGCAAATGAAGTGGTGGACGAATATAGGATCAAGAAGA
AAAAGGGTTGGATTTTGAAGCTCAATCTTGAAAAGGCTTTTGATTGTGTTGATTGGGATTTTCTAGATGAAGTTTTCAAGCTTAAGGCTTTCAACAGGAAGTGGATCAAT
TGGATTCAAATGGAAGACCTCGTGGGAGAATTTTGGCTTCTCGAGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTACTGCTCCTCTCATATGGTGAAATTGAAGCTGAAATTCTTGGCTTTTTCTCTTCTTTATATCAGAAGCTTCCGGCTAAGGTGCTTGCTGAAAGGTCAAAGAAAGT
AATGCCCTCGATAATTTCATGCTCCCAAAGTGCATTTTTTGAAGGAAGACAGATTTTAGACCCAATTCTCATTGCAAATGAAGTGGTGGACGAATATAGGATCAAGAAGA
AAAAGGGTTGGATTTTGAAGCTCAATCTTGAAAAGGCTTTTGATTGTGTTGATTGGGATTTTCTAGATGAAGTTTTCAAGCTTAAGGCTTTCAACAGGAAGTGGATCAAT
TGGATTCAAATGGAAGACCTCGTGGGAGAATTTTGGCTTCTCGAGGATTGA
Protein sequenceShow/hide protein sequence
MVLLLSYGEIEAEILGFFSSLYQKLPAKVLAERSKKVMPSIISCSQSAFFEGRQILDPILIANEVVDEYRIKKKKGWILKLNLEKAFDCVDWDFLDEVFKLKAFNRKWIN
WIQMEDLVGEFWLLED