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Lag0014388 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014388
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr12:252277..252597
RNA-Seq ExpressionLag0014388
SyntenyLag0014388
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0033554 - cellular response to stress (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041036.1 putative plant SNARE 11 [Cucumis melo var. makuwa]1.0e-1648.89Show/hide
Query:  INIDRLEMDDWAKLLGCQCEDLPMNYLGFPLGGNFRNKSFWNPLIERFDRKLDVWKRFPISKGMRVTLVQATLNRLPLYLFSLIKAPFIG
        I++D  ++D +   LGC  + LP NYLGF +GG    K  WN L ERF  K+D W+   +SKG R+TL Q+ LN LP YLFSL++ P IG
Subjt:  INIDRLEMDDWAKLLGCQCEDLPMNYLGFPLGGNFRNKSFWNPLIERFDRKLDVWKRFPISKGMRVTLVQATLNRLPLYLFSLIKAPFIG

RVW54197.1 hypothetical protein CK203_090523 [Vitis vinifera]7.7e-1747.31Show/hide
Query:  KSLMIGINIDRLEMDDWAKLLGCQCEDLPMNYLGFPLGGNFRNKSFWNPLIERFDRKLDVWKRFPISKGMRVTLVQATLNRLPLYLFSLIKAP
        KS + GIN+D   M   A+ LGC+    P+ YLG PLGGN R   FW+P+IER  R+LD W++  +S G R+TL+Q+ L  +P Y  SL K P
Subjt:  KSLMIGINIDRLEMDDWAKLLGCQCEDLPMNYLGFPLGGNFRNKSFWNPLIERFDRKLDVWKRFPISKGMRVTLVQATLNRLPLYLFSLIKAP

XP_010258726.1 PREDICTED: uncharacterized protein LOC104598390 [Nelumbo nucifera]5.3e-1847.25Show/hide
Query:  KSLMIGINIDRLEMDDWAKLLGCQCEDLPMNYLGFPLGGNFRNKSFWNPLIERFDRKLDVWKRFPISKGMRVTLVQATLNRLPLYLFSLIK
        KS ++G+N++  E+ + AK+LGC+    P+NYLG PLG N + +SFWN ++E F++KL  WKR  +S G R+TL++ATL  LP+Y  S+ K
Subjt:  KSLMIGINIDRLEMDDWAKLLGCQCEDLPMNYLGFPLGGNFRNKSFWNPLIERFDRKLDVWKRFPISKGMRVTLVQATLNRLPLYLFSLIK

XP_023743189.1 uncharacterized protein LOC111891376 [Lactuca sativa]3.4e-1745.16Show/hide
Query:  KSLMIGINIDRLEMDDWAKLLGCQCEDLPMNYLGFPLGGNFRNKSFWNPLIERFDRKLDVWKRFPISKGMRVTLVQATLNRLPLYLFSLIKAP
        KS + GI +D  E  +WA LLGC   DLP +YLG P+G N     +W P+I++F  KL +WK   +S G R+TL+++ L+ LP Y  SL +AP
Subjt:  KSLMIGINIDRLEMDDWAKLLGCQCEDLPMNYLGFPLGGNFRNKSFWNPLIERFDRKLDVWKRFPISKGMRVTLVQATLNRLPLYLFSLIKAP

XP_030966469.1 uncharacterized protein LOC115987136 [Quercus lobata]1.0e-1648.39Show/hide
Query:  LMIGI--NIDRLEMDDWAKLLGCQCEDLPMNYLGFPLGGNFRNKSFWNPLIERFDRKLDVWKRFPISKGMRVTLVQATLNRLPLYLFSLIKAP
        +++G+  NID L       +LGC+   LPM YLG PLG NF++K+ WNP++E+ +RKL  WKR  +SKG RVTL+++TL+ LP Y  SL   P
Subjt:  LMIGI--NIDRLEMDDWAKLLGCQCEDLPMNYLGFPLGGNFRNKSFWNPLIERFDRKLDVWKRFPISKGMRVTLVQATLNRLPLYLFSLIKAP

TrEMBL top hitse value%identityAlignment
A0A1U8AAN8 uncharacterized protein LOC1045983902.6e-1847.25Show/hide
Query:  KSLMIGINIDRLEMDDWAKLLGCQCEDLPMNYLGFPLGGNFRNKSFWNPLIERFDRKLDVWKRFPISKGMRVTLVQATLNRLPLYLFSLIK
        KS ++G+N++  E+ + AK+LGC+    P+NYLG PLG N + +SFWN ++E F++KL  WKR  +S G R+TL++ATL  LP+Y  S+ K
Subjt:  KSLMIGINIDRLEMDDWAKLLGCQCEDLPMNYLGFPLGGNFRNKSFWNPLIERFDRKLDVWKRFPISKGMRVTLVQATLNRLPLYLFSLIK

A0A2N9F8U3 Reverse transcriptase domain-containing protein1.3e-1751.25Show/hide
Query:  MDDWAKLLGCQCEDLPMNYLGFPLGGNFRNKSFWNPLIERFDRKLDVWKRFPISKGMRVTLVQATLNRLPLYLFSLIKAP
        M + A +LGC C  LP+NYLG PLG  F+  + WNP+IER +R+L  WKR  +SKG +VTL+++TL+ LP Y  SL   P
Subjt:  MDDWAKLLGCQCEDLPMNYLGFPLGGNFRNKSFWNPLIERFDRKLDVWKRFPISKGMRVTLVQATLNRLPLYLFSLIKAP

A0A2N9FZ78 Reverse transcriptase domain-containing protein1.3e-1748.15Show/hide
Query:  EMDDWAKLLGCQCEDLPMNYLGFPLGGNFRNKSFWNPLIERFDRKLDVWKRFPISKGMRVTLVQATLNRLPLYLFSLIKAP
        +++D A ++GC+   LPM YLG PLG NF++KS W+P++E+ +RKL  W+R  +SKG R+TL+++TL+ LP Y  SL   P
Subjt:  EMDDWAKLLGCQCEDLPMNYLGFPLGGNFRNKSFWNPLIERFDRKLDVWKRFPISKGMRVTLVQATLNRLPLYLFSLIKAP

A0A2N9HFZ6 Reverse transcriptase domain-containing protein1.7e-1747.56Show/hide
Query:  LEMDDWAKLLGCQCEDLPMNYLGFPLGGNFRNKSFWNPLIERFDRKLDVWKRFPISKGMRVTLVQATLNRLPLYLFSLIKAP
        L+++D A ++GC+   LPM YLG PLG NF++KS W+P++E+ +R+L  W+R  +SKG R+TL+++TL+ LP Y  SL   P
Subjt:  LEMDDWAKLLGCQCEDLPMNYLGFPLGGNFRNKSFWNPLIERFDRKLDVWKRFPISKGMRVTLVQATLNRLPLYLFSLIKAP

A0A2N9HUI8 Uncharacterized protein1.7e-1747.37Show/hide
Query:  MAKSLMIGINIDRLEMDDWAKLLGCQCEDLPMNYLGFPLGGNFRNKSFWNPLIERFDRKLDVWKRFPISKGMRVTLVQATLNRLPLYLFSLIKAP
        + KS M+ +  +   +DD A +LGC+   LPM YLG PLG  F+ KS WNP+IER +++L  WKR  +SKG +VTL+++TL+ LP Y  SL   P
Subjt:  MAKSLMIGINIDRLEMDDWAKLLGCQCEDLPMNYLGFPLGGNFRNKSFWNPLIERFDRKLDVWKRFPISKGMRVTLVQATLNRLPLYLFSLIKAP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAATCTTTGATGATTGGGATTAACATAGACAGATTAGAGATGGATGATTGGGCTAAGCTCCTTGGGTGTCAATGTGAAGACCTCCCTATGAATTACCTTGGTTT
TCCTTTGGGTGGGAATTTCCGAAACAAATCCTTCTGGAACCCTTTGATTGAGAGGTTCGATAGGAAGCTAGACGTGTGGAAAAGATTTCCTATTTCAAAAGGAATGAGAG
TTACCCTGGTTCAAGCCACTCTTAATCGCCTCCCCCTTTACTTATTTTCGCTCATTAAAGCCCCCTTCATCGGCCATAAAGACCATGGAGAAGATCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAATCTTTGATGATTGGGATTAACATAGACAGATTAGAGATGGATGATTGGGCTAAGCTCCTTGGGTGTCAATGTGAAGACCTCCCTATGAATTACCTTGGTTT
TCCTTTGGGTGGGAATTTCCGAAACAAATCCTTCTGGAACCCTTTGATTGAGAGGTTCGATAGGAAGCTAGACGTGTGGAAAAGATTTCCTATTTCAAAAGGAATGAGAG
TTACCCTGGTTCAAGCCACTCTTAATCGCCTCCCCCTTTACTTATTTTCGCTCATTAAAGCCCCCTTCATCGGCCATAAAGACCATGGAGAAGATCAGTAG
Protein sequenceShow/hide protein sequence
MAKSLMIGINIDRLEMDDWAKLLGCQCEDLPMNYLGFPLGGNFRNKSFWNPLIERFDRKLDVWKRFPISKGMRVTLVQATLNRLPLYLFSLIKAPFIGHKDHGEDQ