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Lag0014430 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014430
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionclassical arabinogalactan protein 1-like
Genome locationchr12:692809..693147
RNA-Seq ExpressionLag0014430
SyntenyLag0014430
Gene Ontology termsNA
InterPro domainsIPR044959 - Classical arabinogalactan protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3974006.1 hypothetical protein CMV_002619 [Castanea mollissima]1.1e-0550.91Show/hide
Query:  ASVRITVLALMVLFFITSTVAQSPSPSPKKSPHAASPSPTPHSPKVSHKSAPSPATAKPPTAASPSPAVSPSSISSPPADAPAPAANNAVSSTVTVAGYL
        +S+ I +LA++V+  I  + A SP  SPKKSP A+SP          H SAPSPAT K P   SPSPA +PSSIS PP++APAPA N AVS++  +AG +
Subjt:  ASVRITVLALMVLFFITSTVAQSPSPSPKKSPHAASPSPTPHSPKVSHKSAPSPATAKPPTAASPSPAVSPSSISSPPADAPAPAANNAVSSTVTVAGYL

Query:  FAAVSAAAFL
         A V+ A FL
Subjt:  FAAVSAAAFL

XP_011659718.1 classical arabinogalactan protein 10 [Cucumis sativus]6.6e-1157.76Show/hide
Query:  MASVRITVLALMVLFFITSTVAQSPSPSPKKSPHAASPSPTPH-SPKVSHKSAPSPATAKPPTAASPSPAVSP-SSISSPPADAPAPAA--NNAVSSTVT
        MAS+ IT++AL  LF ITST AQSP+PSPKKS H  S SP+PH SP +SHKS  SP         SPSP+ SP +S S PPA+A APA   N+A+++T  
Subjt:  MASVRITVLALMVLFFITSTVAQSPSPSPKKSPHAASPSPTPH-SPKVSHKSAPSPATAKPPTAASPSPAVSP-SSISSPPADAPAPAA--NNAVSSTVT

Query:  VAGYLFAAVSAAAFLF
        V+  LF AVSAAAFLF
Subjt:  VAGYLFAAVSAAAFLF

XP_021899923.1 classical arabinogalactan protein 1 [Carica papaya]4.2e-0548.28Show/hide
Query:  ASVRITVLALMVLFFITSTVAQSPSPSPKKSPHAASPSPTPHSPKVS-HKSAPSPATA------KPPTAASPSPAVSP---SSISSPPADAPAPAANNAV
        AS  + +L ++  FF+ S +AQSP+P P  SP    P   P   K S  KSAPSPAT        P T+ASPSPA +P   SSIS PP+ AP PA N AV
Subjt:  ASVRITVLALMVLFFITSTVAQSPSPSPKKSPHAASPSPTPHSPKVS-HKSAPSPATA------KPPTAASPSPAVSP---SSISSPPADAPAPAANNAV

Query:  SSTVTVAGYLFAAVSA
        ++T TVAG +  AV A
Subjt:  SSTVTVAGYLFAAVSA

XP_022141985.1 classical arabinogalactan protein 1-like [Momordica charantia]2.0e-1565.74Show/hide
Query:  MASVRITVLALMVLFFITSTVAQSPSPSPKKSPHAASPSPTPHSPKVSHKSAPSPATAK----PPTAASPSPAVSPSSISSPPADAPAPAANNAVSSTVT
        MASVR TVLALM L  ITS  AQ    SPKK  HAASPSP   SP+VS KSAPSPAT K     P ++SPSPA+ PSSISSPPADAPA A N A S++  
Subjt:  MASVRITVLALMVLFFITSTVAQSPSPSPKKSPHAASPSPTPHSPKVSHKSAPSPATAK----PPTAASPSPAVSPSSISSPPADAPAPAANNAVSSTVT

Query:  VAGYLFAA
        VAG LFAA
Subjt:  VAGYLFAA

XP_027339344.1 classical arabinogalactan protein 1-like [Abrus precatorius]4.2e-0549.07Show/hide
Query:  VLALMVLFFITSTVAQSPSPSPKKSPHAASP----SPTPHSPKVSHKSAPSPATAKPPTAASPSPAVSPSSISSPPADAPAPAANNAVSSTVTVAGYLFA
        V  L+     +ST+AQSP+ SP KSP A SP    SP+  SP  S  S PS     P  + + +P +SPSSIS+PP++AP PAAN AVS+TVTVAG    
Subjt:  VLALMVLFFITSTVAQSPSPSPKKSPHAASP----SPTPHSPKVSHKSAPSPATAKPPTAASPSPAVSPSSISSPPADAPAPAANNAVSSTVTVAGYLFA

Query:  AVSAAAFL
         + AAA L
Subjt:  AVSAAAFL

TrEMBL top hitse value%identityAlignment
A0A0A0K7F2 Uncharacterized protein3.2e-1157.76Show/hide
Query:  MASVRITVLALMVLFFITSTVAQSPSPSPKKSPHAASPSPTPH-SPKVSHKSAPSPATAKPPTAASPSPAVSP-SSISSPPADAPAPAA--NNAVSSTVT
        MAS+ IT++AL  LF ITST AQSP+PSPKKS H  S SP+PH SP +SHKS  SP         SPSP+ SP +S S PPA+A APA   N+A+++T  
Subjt:  MASVRITVLALMVLFFITSTVAQSPSPSPKKSPHAASPSPTPH-SPKVSHKSAPSPATAKPPTAASPSPAVSP-SSISSPPADAPAPAA--NNAVSSTVT

Query:  VAGYLFAAVSAAAFLF
        V+  LF AVSAAAFLF
Subjt:  VAGYLFAAVSAAAFLF

A0A0A0KZB8 Uncharacterized protein1.0e-0446.43Show/hide
Query:  VLALMVLFFITSTVAQSPSPSPKKSP-HAASPSPTPHSPKVSHKSAPSPATAKPP-------TAASPSPAVSPSSISSPPADAPAPAANNAVSSTVTVAG
        V  + V FFI S  AQSP+ SP  SP  + S +P+ +SPK S   AP+P++ K P        + SPSPA SP+SISSPPADAPAP+ N A S T +V G
Subjt:  VLALMVLFFITSTVAQSPSPSPKKSP-HAASPSPTPHSPKVSHKSAPSPATAKPP-------TAASPSPAVSPSSISSPPADAPAPAANNAVSSTVTVAG

Query:  YLFAAVSAAAFL
         +  A+ A   +
Subjt:  YLFAAVSAAAFL

A0A5A7V5Q9 Classical arabinogalactan protein 1-like2.6e-0545Show/hide
Query:  SVRITVLALMVLFFITSTVAQSPSPSPKKSPHAASPSPTPHSPKVSHKSAPSPATAKPP-----------TAASPSPAVSPSSISSPPADAPAPAANNAV
        ++R  V  ++V F I S  AQSP+ SP K+P   S SP+  SPK S   AP+P++ K P            ++SPSPA SPSSISSPPADAPAP+ N A 
Subjt:  SVRITVLALMVLFFITSTVAQSPSPSPKKSPHAASPSPTPHSPKVSHKSAPSPATAKPP-----------TAASPSPAVSPSSISSPPADAPAPAANNAV

Query:  SSTVTVAGYLFAAVSAAAFL
        S T +V G    A+ A   +
Subjt:  SSTVTVAGYLFAAVSAAAFL

A0A6J1CJM5 classical arabinogalactan protein 1-like9.7e-1665.74Show/hide
Query:  MASVRITVLALMVLFFITSTVAQSPSPSPKKSPHAASPSPTPHSPKVSHKSAPSPATAK----PPTAASPSPAVSPSSISSPPADAPAPAANNAVSSTVT
        MASVR TVLALM L  ITS  AQ    SPKK  HAASPSP   SP+VS KSAPSPAT K     P ++SPSPA+ PSSISSPPADAPA A N A S++  
Subjt:  MASVRITVLALMVLFFITSTVAQSPSPSPKKSPHAASPSPTPHSPKVSHKSAPSPATAK----PPTAASPSPAVSPSSISSPPADAPAPAANNAVSSTVT

Query:  VAGYLFAA
        VAG LFAA
Subjt:  VAGYLFAA

A0A7N2MWF4 Uncharacterized protein2.0e-0550Show/hide
Query:  ASVRITVLALMVLFFITSTVAQSPSPSPKKSPHAASPSPTPHSPKVSHKSAPSPATAKPPTAASPSPAVSPSSISSPPADAPAPAANNAVSSTVTVAGYL
        +S+ I +LA++V+  I  + A SP  SPKKSP A SP          H SAPSPAT K P   SPSP  +PSSIS PP++APAPA N AVS++  +AG +
Subjt:  ASVRITVLALMVLFFITSTVAQSPSPSPKKSPHAASPSPTPHSPKVSHKSAPSPATAKPPTAASPSPAVSPSSISSPPADAPAPAANNAVSSTVTVAGYL

Query:  FAAVSAAAFL
         A V+ A FL
Subjt:  FAAVSAAAFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCGTACGCATCACAGTTCTGGCGCTAATGGTTCTCTTCTTCATCACCTCCACGGTGGCTCAATCTCCATCGCCGTCGCCAAAGAAATCTCCGCACGCAGCCTC
TCCCTCGCCGACGCCCCATTCCCCGAAGGTTTCTCACAAATCGGCGCCGTCGCCGGCCACCGCTAAGCCTCCTACCGCCGCTTCACCGTCACCGGCCGTTTCGCCATCCT
CCATCTCCTCCCCTCCCGCCGACGCTCCTGCTCCTGCCGCTAACAATGCTGTTTCCTCTACTGTCACCGTCGCTGGTTATCTTTTCGCCGCCGTCTCCGCCGCTGCTTTC
CTCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCGTACGCATCACAGTTCTGGCGCTAATGGTTCTCTTCTTCATCACCTCCACGGTGGCTCAATCTCCATCGCCGTCGCCAAAGAAATCTCCGCACGCAGCCTC
TCCCTCGCCGACGCCCCATTCCCCGAAGGTTTCTCACAAATCGGCGCCGTCGCCGGCCACCGCTAAGCCTCCTACCGCCGCTTCACCGTCACCGGCCGTTTCGCCATCCT
CCATCTCCTCCCCTCCCGCCGACGCTCCTGCTCCTGCCGCTAACAATGCTGTTTCCTCTACTGTCACCGTCGCTGGTTATCTTTTCGCCGCCGTCTCCGCCGCTGCTTTC
CTCTTCTAG
Protein sequenceShow/hide protein sequence
MASVRITVLALMVLFFITSTVAQSPSPSPKKSPHAASPSPTPHSPKVSHKSAPSPATAKPPTAASPSPAVSPSSISSPPADAPAPAANNAVSSTVTVAGYLFAAVSAAAF
LF