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Lag0014449 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014449
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionMADS-box protein JOINTLESS-like
Genome locationchr12:893254..894341
RNA-Seq ExpressionLag0014449
SyntenyLag0014449
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002100 - Transcription factor, MADS-box
IPR036879 - Transcription factor, MADS-box superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022971944.1 MADS-box protein JOINTLESS-like isoform X2 [Cucurbita maxima]2.1e-21100Show/hide
Query:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS
        MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS
Subjt:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS

XP_023511719.1 MADS-box protein JOINTLESS-like [Cucurbita pepo subsp. pepo]2.1e-21100Show/hide
Query:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS
        MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS
Subjt:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS

XP_031744925.1 MADS-box protein SVP isoform X2 [Cucumis sativus]2.1e-21100Show/hide
Query:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS
        MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS
Subjt:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS

XP_038886864.1 MADS-box protein SVP-like isoform X3 [Benincasa hispida]2.1e-21100Show/hide
Query:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS
        MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS
Subjt:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS

XP_038886865.1 MADS-box protein SVP-like isoform X4 [Benincasa hispida]2.1e-21100Show/hide
Query:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS
        MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS
Subjt:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS

TrEMBL top hitse value%identityAlignment
A0A6J1GJY0 MADS-box protein JOINTLESS-like isoform X11.0e-21100Show/hide
Query:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS
        MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS
Subjt:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS

A0A6J1GL18 MADS-box protein JOINTLESS-like isoform X21.0e-21100Show/hide
Query:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS
        MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS
Subjt:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS

A0A6J1I4L2 MADS-box protein JOINTLESS-like isoform X31.0e-21100Show/hide
Query:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS
        MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS
Subjt:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS

A0A6J1I8F3 MADS-box protein JOINTLESS-like isoform X11.0e-21100Show/hide
Query:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS
        MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS
Subjt:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS

A0A6J1IA12 MADS-box protein JOINTLESS-like isoform X21.0e-21100Show/hide
Query:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS
        MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS
Subjt:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS

SwissProt top hitse value%identityAlignment
O82794 MADS-box protein AGL241.5e-1765.08Show/hide
Query:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASRRAK
        M R+KI+IKKIDNI ARQV FSKRR+G+FKKA EL++LCDA++ L++FSA+GKLF+++S R +
Subjt:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASRRAK

Q5K4R0 MADS-box transcription factor 474.3e-1773.68Show/hide
Query:  RKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS
        R++I I++IDN+AARQV FSKRR+GLFKKA+EL+ILCDAE+GL+VFSA+GKLF +AS
Subjt:  RKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS

Q6VAM4 MADS-box transcription factor 239.5e-1762.16Show/hide
Query:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASRRAKLKSSMLISNET
        M R KI+IK+IDN  +RQV FSKRR GLFKKA+EL+ILCDAE+GLLVFS++ +L+D+AS  + +KS +   NET
Subjt:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASRRAKLKSSMLISNET

Q9FUY6 MADS-box protein JOINTLESS5.0e-1868.25Show/hide
Query:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASRRAK
        M R+KIQIKKIDN  ARQV FSKRR+GLFKKA+EL++LCDA++ L++FS++GKLFDY+S   K
Subjt:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASRRAK

Q9FVC1 MADS-box protein SVP9.5e-1763.49Show/hide
Query:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASRRAK
        M R+KIQI+KIDN  ARQV FSKRR+GLFKKA+EL++LCDA++ L++FS++GKLF++ S   K
Subjt:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASRRAK

Arabidopsis top hitse value%identityAlignment
AT2G14210.1 AGAMOUS-like 447.4e-1767.8Show/hide
Query:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS
        M R KI I++IDN  +RQV FSKRR GL KKAKEL+ILCDAE+G+++FS++GKL+DYAS
Subjt:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS

AT2G22540.1 K-box region and MADS-box transcription factor family protein6.7e-1863.49Show/hide
Query:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASRRAK
        M R+KIQI+KIDN  ARQV FSKRR+GLFKKA+EL++LCDA++ L++FS++GKLF++ S   K
Subjt:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASRRAK

AT2G22540.2 K-box region and MADS-box transcription factor family protein2.6e-1769.64Show/hide
Query:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFD
        M R+KIQI+KIDN  ARQV FSKRR+GLFKKA+EL++LCDA++ L++FS++GKLFD
Subjt:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFD

AT4G24540.1 AGAMOUS-like 241.0e-1865.08Show/hide
Query:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASRRAK
        M R+KI+IKKIDNI ARQV FSKRR+G+FKKA EL++LCDA++ L++FSA+GKLF+++S R +
Subjt:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASRRAK

AT4G37940.1 AGAMOUS-like 213.3e-1766.67Show/hide
Query:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASRRAK
        M R KI I++ID+  +RQV FSKRRKGL KKAKELAILCDAE+GL++FS++GKL+D+AS   K
Subjt:  MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASRRAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAGGAAGAAAATTCAGATCAAGAAGATCGACAACATAGCTGCAAGGCAAGTGGCATTTTCAAAGAGAAGAAAAGGGCTTTTCAAAAAAGCTAAAGAGCTTGCAAT
TCTCTGTGATGCTGAGATTGGCCTTCTGGTTTTTTCTGCTTCTGGAAAGCTCTTTGACTATGCAAGTAGAAGGGCGAAGCTTAAATCCTCCATGTTGATATCAAATGAAA
CATAA
mRNA sequenceShow/hide mRNA sequence
ATGACGAGGAAGAAAATTCAGATCAAGAAGATCGACAACATAGCTGCAAGGCAAGTGGCATTTTCAAAGAGAAGAAAAGGGCTTTTCAAAAAAGCTAAAGAGCTTGCAAT
TCTCTGTGATGCTGAGATTGGCCTTCTGGTTTTTTCTGCTTCTGGAAAGCTCTTTGACTATGCAAGTAGAAGGGCGAAGCTTAAATCCTCCATGTTGATATCAAATGAAA
CATAA
Protein sequenceShow/hide protein sequence
MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASRRAKLKSSMLISNET