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Lag0014466 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014466
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein FAF-like, chloroplastic
Genome locationchr12:1088804..1091572
RNA-Seq ExpressionLag0014466
SyntenyLag0014466
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605963.1 Protein FAF-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.5e-1277.19Show/hide
Query:  VTTPVSLNVEEEEDELEELIAGDFAEIAEEKDEENDLEAEELEVPMEVPPRLSSSVM
        VTTP +LNV+EEEDE EELIAGDF E+ E +DEENDLEAEELE+PME  P LSSSVM
Subjt:  VTTPVSLNVEEEEDELEELIAGDFAEIAEEKDEENDLEAEELEVPMEVPPRLSSSVM

KAG7035914.1 Protein FAF-like, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-1277.19Show/hide
Query:  VTTPVSLNVEEEEDELEELIAGDFAEIAEEKDEENDLEAEELEVPMEVPPRLSSSVM
        VTTP +LNV+EEEDE EELIAGDF E+ E +DEENDLEAEELE+PME  P LSSSVM
Subjt:  VTTPVSLNVEEEEDELEELIAGDFAEIAEEKDEENDLEAEELEVPMEVPPRLSSSVM

XP_022957627.1 protein FAF-like, chloroplastic [Cucurbita moschata]3.5e-1277.19Show/hide
Query:  VTTPVSLNVEEEEDELEELIAGDFAEIAEEKDEENDLEAEELEVPMEVPPRLSSSVM
        VTTP +LNV+EEEDE EELIAGDF E+ E +DEENDLEAEELE+PME  P LSSSVM
Subjt:  VTTPVSLNVEEEEDELEELIAGDFAEIAEEKDEENDLEAEELEVPMEVPPRLSSSVM

XP_022995090.1 protein FAF-like, chloroplastic [Cucurbita maxima]2.3e-1175.44Show/hide
Query:  VTTPVSLNVEEEEDELEELIAGDFAEIAEEKDEENDLEAEELEVPMEVPPRLSSSVM
        VTTP +LNV+EEEDE EELIAGDF E+ E +DEENDL AEELE+PME  P LSSSVM
Subjt:  VTTPVSLNVEEEEDELEELIAGDFAEIAEEKDEENDLEAEELEVPMEVPPRLSSSVM

XP_023532574.1 protein FAF-like, chloroplastic [Cucurbita pepo subsp. pepo]4.6e-1277.19Show/hide
Query:  VTTPVSLNVEEEEDELEELIAGDFAEIAEEKDEENDLEAEELEVPMEVPPRLSSSVM
        VTTP  LNV+EEEDE EELIAGDF E+ E +DEENDLEAEELE+PME  P LSSSVM
Subjt:  VTTPVSLNVEEEEDELEELIAGDFAEIAEEKDEENDLEAEELEVPMEVPPRLSSSVM

TrEMBL top hitse value%identityAlignment
A0A1S3BMD7 protein FAF-like, chloroplastic5.3e-0661.29Show/hide
Query:  TTPVSLNV-EEEEDELEELIAGDFAEIAEEK-----DEENDLEAEELEVPMEVPPRLSSSVM
        TTP +L V EEEE+ELEELIAG+F E+ E +     ++EN LE EELE+P+E  PRLSSSVM
Subjt:  TTPVSLNV-EEEEDELEELIAGDFAEIAEEK-----DEENDLEAEELEVPMEVPPRLSSSVM

A0A5A7V799 Protein FAF-like5.3e-0661.29Show/hide
Query:  TTPVSLNV-EEEEDELEELIAGDFAEIAEEK-----DEENDLEAEELEVPMEVPPRLSSSVM
        TTP +L V EEEE+ELEELIAG+F E+ E +     ++EN LE EELE+P+E  PRLSSSVM
Subjt:  TTPVSLNV-EEEEDELEELIAGDFAEIAEEK-----DEENDLEAEELEVPMEVPPRLSSSVM

A0A5D3B9V0 Protein FAF-like5.3e-0661.29Show/hide
Query:  TTPVSLNV-EEEEDELEELIAGDFAEIAEEK-----DEENDLEAEELEVPMEVPPRLSSSVM
        TTP +L V EEEE+ELEELIAG+F E+ E +     ++EN LE EELE+P+E  PRLSSSVM
Subjt:  TTPVSLNV-EEEEDELEELIAGDFAEIAEEK-----DEENDLEAEELEVPMEVPPRLSSSVM

A0A6J1GZM9 protein FAF-like, chloroplastic1.7e-1277.19Show/hide
Query:  VTTPVSLNVEEEEDELEELIAGDFAEIAEEKDEENDLEAEELEVPMEVPPRLSSSVM
        VTTP +LNV+EEEDE EELIAGDF E+ E +DEENDLEAEELE+PME  P LSSSVM
Subjt:  VTTPVSLNVEEEEDELEELIAGDFAEIAEEKDEENDLEAEELEVPMEVPPRLSSSVM

A0A6J1K356 protein FAF-like, chloroplastic1.1e-1175.44Show/hide
Query:  VTTPVSLNVEEEEDELEELIAGDFAEIAEEKDEENDLEAEELEVPMEVPPRLSSSVM
        VTTP +LNV+EEEDE EELIAGDF E+ E +DEENDL AEELE+PME  P LSSSVM
Subjt:  VTTPVSLNVEEEEDELEELIAGDFAEIAEEKDEENDLEAEELEVPMEVPPRLSSSVM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGTGAATCGTGCGCGTGAACGAGCTGCTCGCGGTTGGGTTTATGTTCGCGTTGCTGGAGAAGGAGAAAACTGGTCGGAATGGCGTGGGTTCTTTGTAGGGGTGTG
CGTTGTTACCACTCCGGTGAGCTTAAACGTTGAAGAGGAAGAAGACGAGTTAGAAGAACTAATTGCTGGGGACTTTGCAGAAATTGCCGAAGAGAAAGACGAGGAAAACG
ATTTGGAAGCCGAGGAATTGGAAGTTCCGATGGAGGTGCCTCCGAGATTGTCGAGCTCTGTTATGGCCGAAGGAAATGCAGACTCGCAGAGAGATGGAGAACAAGCGGAG
ATGGAGAAGAAGTGGAGGGTGTCGAGGTTGCTTGCCGCGTGCGCTTCGTGCTGCTGCGCTCATGGCTGGAGAATGGCCATCGATAGCGGTTCGTCGGAGCAGAATCGAAA
GAGGGGCTGGTGCACACGAGAGAAAGAGATGGAGGAAGAAGATGGATTGGAGCTAGGGTGTCGAGGTTGCTTGCCGCGTGCGCTTCGTGCTGCTGCGCTCATGGCTGGAG
AATGGCCATCGATAGCGGTTCGTCGGAGCAGAATCGAAAGAGGGGCTGGGTGTCGAGGTTGCTTGCCGCGTGCGCTTCGTGCTGCTGCGCTCATGGCTGGAGAATGGCCA
TCGATAGCGGTTCGTCGGAGCAGAATCGAAAGAGGGGCTGGTGCACACGAGAGAAAGAGATGGAGGAAGAAGATGGATTGGAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGTGAATCGTGCGCGTGAACGAGCTGCTCGCGGTTGGGTTTATGTTCGCGTTGCTGGAGAAGGAGAAAACTGGTCGGAATGGCGTGGGTTCTTTGTAGGGGTGTG
CGTTGTTACCACTCCGGTGAGCTTAAACGTTGAAGAGGAAGAAGACGAGTTAGAAGAACTAATTGCTGGGGACTTTGCAGAAATTGCCGAAGAGAAAGACGAGGAAAACG
ATTTGGAAGCCGAGGAATTGGAAGTTCCGATGGAGGTGCCTCCGAGATTGTCGAGCTCTGTTATGGCCGAAGGAAATGCAGACTCGCAGAGAGATGGAGAACAAGCGGAG
ATGGAGAAGAAGTGGAGGGTGTCGAGGTTGCTTGCCGCGTGCGCTTCGTGCTGCTGCGCTCATGGCTGGAGAATGGCCATCGATAGCGGTTCGTCGGAGCAGAATCGAAA
GAGGGGCTGGTGCACACGAGAGAAAGAGATGGAGGAAGAAGATGGATTGGAGCTAGGGTGTCGAGGTTGCTTGCCGCGTGCGCTTCGTGCTGCTGCGCTCATGGCTGGAG
AATGGCCATCGATAGCGGTTCGTCGGAGCAGAATCGAAAGAGGGGCTGGGTGTCGAGGTTGCTTGCCGCGTGCGCTTCGTGCTGCTGCGCTCATGGCTGGAGAATGGCCA
TCGATAGCGGTTCGTCGGAGCAGAATCGAAAGAGGGGCTGGTGCACACGAGAGAAAGAGATGGAGGAAGAAGATGGATTGGAGCTAG
Protein sequenceShow/hide protein sequence
MEVNRARERAARGWVYVRVAGEGENWSEWRGFFVGVCVVTTPVSLNVEEEEDELEELIAGDFAEIAEEKDEENDLEAEELEVPMEVPPRLSSSVMAEGNADSQRDGEQAE
MEKKWRVSRLLAACASCCCAHGWRMAIDSGSSEQNRKRGWCTREKEMEEEDGLELGCRGCLPRALRAAALMAGEWPSIAVRRSRIERGAGCRGCLPRALRAAALMAGEWP
SIAVRRSRIERGAGAHERKRWRKKMDWS