; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0014488 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014488
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDUF4283 domain-containing protein
Genome locationchr12:1312312..1313130
RNA-Seq ExpressionLag0014488
SyntenyLag0014488
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039949.1 hypothetical protein E6C27_scaffold122G002290 [Cucumis melo var. makuwa]4.3e-3034.43Show/hide
Query:  VPGYRSKKLKYFRVRKIDWDEVIIITKRDFHDDWGRILDILQRQL---ESGLVINPFQPDKALLKCPSKELVNLLTTNKGWVSFGPVILKVEKWNRMRHC
        +P  +S+  K  +   IDW++ II+++R FHDDW +I+D L+ Q    +S     PF  DKALL    KEL NLL  N GW + GP  +K EKW++  H 
Subjt:  VPGYRSKKLKYFRVRKIDWDEVIIITKRDFHDDWGRILDILQRQL---ESGLVINPFQPDKALLKCPSKELVNLLTTNKGWVSFGPVILKVEKWNRMRHC

Query:  RINVVPCYGGWVRIRNLPLHLWNISIFKAIGDCLGGEVEVI--------------------------------DGDQVFRAQIVTFQDGNLLIDRVAGIH
           V+P YGGW R R +PLH+WN++ F  IG+  GG ++                                  +  Q F  Q +T  +G  L +R   +H
Subjt:  RINVVPCYGGWVRIRNLPLHLWNISIFKAIGDCLGGEVEVI--------------------------------DGDQVFRAQIVTFQDGNLLIDRVAGIH

Query:  GSFSSAASHAFH
        GSF+ +A+  F+
Subjt:  GSFSSAASHAFH

KAA0041398.1 hypothetical protein E6C27_scaffold206G00440 [Cucumis melo var. makuwa]5.1e-3135.85Show/hide
Query:  VPGYRSKKLKYFRVRKIDWDEVIIITKRDFHDDWGRILDILQRQL---ESGLVINPFQPDKALLKCPSKELVNLLTTNKGWVSFGPVILKVEKWNRMRHC
        +P  +S+  K  R   IDW++ II+++R FHDDW +I+D L+ Q    ES     PF  DKALL    K+L  LL  N GW + GP  +K EKW++  H 
Subjt:  VPGYRSKKLKYFRVRKIDWDEVIIITKRDFHDDWGRILDILQRQL---ESGLVINPFQPDKALLKCPSKELVNLLTTNKGWVSFGPVILKVEKWNRMRHC

Query:  RINVVPCYGGWVRIRNLPLHLWNISIFKAIGDCLGGEVEVI--------------------------------DGDQVFRAQIVTFQDGNLLIDRVAGIH
           V+P YGGW R R +PLH+WN++ F  IG+  GG ++                                  +   VF  QIVT  +G  L +R   IH
Subjt:  RINVVPCYGGWVRIRNLPLHLWNISIFKAIGDCLGGEVEVI--------------------------------DGDQVFRAQIVTFQDGNLLIDRVAGIH

Query:  GSFSSAASHAFH
        GSF   A+  F+
Subjt:  GSFSSAASHAFH

KAA0044557.1 hypothetical protein E6C27_scaffold46G003060 [Cucumis melo var. makuwa]2.5e-3034.91Show/hide
Query:  VPGYRSKKLKYFRVRKIDWDEVIIITKRDFHDDWGRILDILQRQL---ESGLVINPFQPDKALLKCPSKELVNLLTTNKGWVSFGPVILKVEKWNRMRHC
        +P  +S+  K  R   IDW++ II+++R FHDDW +I+D L+ Q    +S     PF  DKALL    K+L  LL  N GW + GP  +K EKW++  H 
Subjt:  VPGYRSKKLKYFRVRKIDWDEVIIITKRDFHDDWGRILDILQRQL---ESGLVINPFQPDKALLKCPSKELVNLLTTNKGWVSFGPVILKVEKWNRMRHC

Query:  RINVVPCYGGWVRIRNLPLHLWNISIFKAIGDCLGGEVEVI--------------------------------DGDQVFRAQIVTFQDGNLLIDRVAGIH
           V+P YGGW R R +PLH+WN++ F  IG+  GG ++                                  +   VF  Q VT  +G  L +R   IH
Subjt:  RINVVPCYGGWVRIRNLPLHLWNISIFKAIGDCLGGEVEVI--------------------------------DGDQVFRAQIVTFQDGNLLIDRVAGIH

Query:  GSFSSAASHAFH
        GSF+  A+  F+
Subjt:  GSFSSAASHAFH

TYK05762.1 cleavage and polyadenylation specificity factor subunit 1 [Cucumis melo var. makuwa]1.4e-2843.44Show/hide
Query:  IDWDEVIIITKRDFHDDWGRILDILQRQLESGLVINPFQPDKALLKCPSKELVNLLTTNKGWVSFGPVILKVEKWNRMRHCRINVVPCYGGWVRIRNLPL
        +DW++++++T+R FHDDW +I++ L+ QL+  +   PF  DKAL+    KE  NL+  NKGW + G   +K E+WN+  H    VVP YGGW+++R +PL
Subjt:  IDWDEVIIITKRDFHDDWGRILDILQRQLESGLVINPFQPDKALLKCPSKELVNLLTTNKGWVSFGPVILKVEKWNRMRHCRINVVPCYGGWVRIRNLPL

Query:  HLWNISIFKAIGDCLGGEVEVI
        H WN+  F  IGD  GG ++V+
Subjt:  HLWNISIFKAIGDCLGGEVEVI

XP_022149859.1 uncharacterized protein LOC111018186 [Momordica charantia]1.7e-5546.19Show/hide
Query:  VRKIDWDEVIIITKRDFHDDWGRILDILQRQLESGLVINPFQPDKALLKCPSKELVNLLTTNKGWVSFGPVILKVEKWNRMRHCRINVVPCYGGWVRIRN
        VR+++W+E I+IT+RDFHDDW RIL  ++ Q ES  +INPFQ DKAL+KCPSK+L  LL TNKGWV+FGPV +K+E WN + H R  + P YG WV+IRN
Subjt:  VRKIDWDEVIIITKRDFHDDWGRILDILQRQLESGLVINPFQPDKALLKCPSKELVNLLTTNKGWVSFGPVILKVEKWNRMRHCRINVVPCYGGWVRIRN

Query:  LPLHLWNISIFKAIGDCLGG-------------------------------EVEVIDGDQVFRAQIVTFQDGNLLIDRVAGIHGSFSSAASHAFHRGPMD
        +PLHLW+++ FKAIG+ LGG                               E+  +DG   F+A++V+F+D   L  +  GIHG FSS A+ +FH+G  +
Subjt:  LPLHLWNISIFKAIGDCLGG-------------------------------EVEVIDGDQVFRAQIVTFQDGNLLIDRVAGIHGSFSSAASHAFHRGPMD

Query:  PEFSTADKWRIEDGAFCPQVNAQ
           ++ D+WR+E+G   P VN Q
Subjt:  PEFSTADKWRIEDGAFCPQVNAQ

TrEMBL top hitse value%identityAlignment
A0A5A7TEP0 DUF4283 domain-containing protein2.5e-3135.85Show/hide
Query:  VPGYRSKKLKYFRVRKIDWDEVIIITKRDFHDDWGRILDILQRQL---ESGLVINPFQPDKALLKCPSKELVNLLTTNKGWVSFGPVILKVEKWNRMRHC
        +P  +S+  K  R   IDW++ II+++R FHDDW +I+D L+ Q    ES     PF  DKALL    K+L  LL  N GW + GP  +K EKW++  H 
Subjt:  VPGYRSKKLKYFRVRKIDWDEVIIITKRDFHDDWGRILDILQRQL---ESGLVINPFQPDKALLKCPSKELVNLLTTNKGWVSFGPVILKVEKWNRMRHC

Query:  RINVVPCYGGWVRIRNLPLHLWNISIFKAIGDCLGGEVEVI--------------------------------DGDQVFRAQIVTFQDGNLLIDRVAGIH
           V+P YGGW R R +PLH+WN++ F  IG+  GG ++                                  +   VF  QIVT  +G  L +R   IH
Subjt:  RINVVPCYGGWVRIRNLPLHLWNISIFKAIGDCLGGEVEVI--------------------------------DGDQVFRAQIVTFQDGNLLIDRVAGIH

Query:  GSFSSAASHAFH
        GSF   A+  F+
Subjt:  GSFSSAASHAFH

A0A5A7TRS9 DUF4283 domain-containing protein1.2e-3034.91Show/hide
Query:  VPGYRSKKLKYFRVRKIDWDEVIIITKRDFHDDWGRILDILQRQL---ESGLVINPFQPDKALLKCPSKELVNLLTTNKGWVSFGPVILKVEKWNRMRHC
        +P  +S+  K  R   IDW++ II+++R FHDDW +I+D L+ Q    +S     PF  DKALL    K+L  LL  N GW + GP  +K EKW++  H 
Subjt:  VPGYRSKKLKYFRVRKIDWDEVIIITKRDFHDDWGRILDILQRQL---ESGLVINPFQPDKALLKCPSKELVNLLTTNKGWVSFGPVILKVEKWNRMRHC

Query:  RINVVPCYGGWVRIRNLPLHLWNISIFKAIGDCLGGEVEVI--------------------------------DGDQVFRAQIVTFQDGNLLIDRVAGIH
           V+P YGGW R R +PLH+WN++ F  IG+  GG ++                                  +   VF  Q VT  +G  L +R   IH
Subjt:  RINVVPCYGGWVRIRNLPLHLWNISIFKAIGDCLGGEVEVI--------------------------------DGDQVFRAQIVTFQDGNLLIDRVAGIH

Query:  GSFSSAASHAFH
        GSF+  A+  F+
Subjt:  GSFSSAASHAFH

A0A5D3C3G6 Cleavage and polyadenylation specificity factor subunit 16.7e-2943.44Show/hide
Query:  IDWDEVIIITKRDFHDDWGRILDILQRQLESGLVINPFQPDKALLKCPSKELVNLLTTNKGWVSFGPVILKVEKWNRMRHCRINVVPCYGGWVRIRNLPL
        +DW++++++T+R FHDDW +I++ L+ QL+  +   PF  DKAL+    KE  NL+  NKGW + G   +K E+WN+  H    VVP YGGW+++R +PL
Subjt:  IDWDEVIIITKRDFHDDWGRILDILQRQLESGLVINPFQPDKALLKCPSKELVNLLTTNKGWVSFGPVILKVEKWNRMRHCRINVVPCYGGWVRIRNLPL

Query:  HLWNISIFKAIGDCLGGEVEVI
        H WN+  F  IGD  GG ++V+
Subjt:  HLWNISIFKAIGDCLGGEVEVI

A0A5D3DLT1 DUF4283 domain-containing protein2.1e-3034.43Show/hide
Query:  VPGYRSKKLKYFRVRKIDWDEVIIITKRDFHDDWGRILDILQRQL---ESGLVINPFQPDKALLKCPSKELVNLLTTNKGWVSFGPVILKVEKWNRMRHC
        +P  +S+  K  +   IDW++ II+++R FHDDW +I+D L+ Q    +S     PF  DKALL    KEL NLL  N GW + GP  +K EKW++  H 
Subjt:  VPGYRSKKLKYFRVRKIDWDEVIIITKRDFHDDWGRILDILQRQL---ESGLVINPFQPDKALLKCPSKELVNLLTTNKGWVSFGPVILKVEKWNRMRHC

Query:  RINVVPCYGGWVRIRNLPLHLWNISIFKAIGDCLGGEVEVI--------------------------------DGDQVFRAQIVTFQDGNLLIDRVAGIH
           V+P YGGW R R +PLH+WN++ F  IG+  GG ++                                  +  Q F  Q +T  +G  L +R   +H
Subjt:  RINVVPCYGGWVRIRNLPLHLWNISIFKAIGDCLGGEVEVI--------------------------------DGDQVFRAQIVTFQDGNLLIDRVAGIH

Query:  GSFSSAASHAFH
        GSF+ +A+  F+
Subjt:  GSFSSAASHAFH

A0A6J1D6X4 uncharacterized protein LOC1110181868.4e-5646.19Show/hide
Query:  VRKIDWDEVIIITKRDFHDDWGRILDILQRQLESGLVINPFQPDKALLKCPSKELVNLLTTNKGWVSFGPVILKVEKWNRMRHCRINVVPCYGGWVRIRN
        VR+++W+E I+IT+RDFHDDW RIL  ++ Q ES  +INPFQ DKAL+KCPSK+L  LL TNKGWV+FGPV +K+E WN + H R  + P YG WV+IRN
Subjt:  VRKIDWDEVIIITKRDFHDDWGRILDILQRQLESGLVINPFQPDKALLKCPSKELVNLLTTNKGWVSFGPVILKVEKWNRMRHCRINVVPCYGGWVRIRN

Query:  LPLHLWNISIFKAIGDCLGG-------------------------------EVEVIDGDQVFRAQIVTFQDGNLLIDRVAGIHGSFSSAASHAFHRGPMD
        +PLHLW+++ FKAIG+ LGG                               E+  +DG   F+A++V+F+D   L  +  GIHG FSS A+ +FH+G  +
Subjt:  LPLHLWNISIFKAIGDCLGG-------------------------------EVEVIDGDQVFRAQIVTFQDGNLLIDRVAGIHGSFSSAASHAFHRGPMD

Query:  PEFSTADKWRIEDGAFCPQVNAQ
           ++ D+WR+E+G   P VN Q
Subjt:  PEFSTADKWRIEDGAFCPQVNAQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGTAGTAGGAAGGGCCAGGCATCAGTCTGTGCCAGGCTACAGGAGTAAGAAACTCAAATACTTTAGAGTTAGAAAGATTGACTGGGATGAAGTGATTATCATTAC
TAAAAGAGACTTTCATGATGACTGGGGAAGGATCCTCGACATTCTTCAGAGGCAACTAGAGAGTGGTCTTGTGATAAACCCCTTCCAACCGGATAAAGCCCTGCTTAAAT
GCCCATCCAAGGAGCTGGTGAATTTATTAACAACAAACAAAGGATGGGTCAGCTTTGGACCTGTGATTTTAAAAGTCGAAAAATGGAATAGAATGAGGCATTGTAGAATT
AATGTGGTGCCATGTTATGGTGGTTGGGTGAGAATCAGAAACCTCCCGTTGCATTTATGGAACATCAGTATATTTAAAGCTATTGGAGATTGCTTGGGGGGGGAAGTCGA
AGTTATTGACGGAGACCAAGTCTTCAGAGCGCAAATCGTTACATTTCAAGATGGTAACCTGCTCATCGATCGTGTGGCCGGAATTCATGGAAGTTTCTCGTCGGCGGCAT
CACATGCTTTCCACAGAGGGCCGATGGATCCCGAGTTTAGCACAGCAGACAAATGGAGAATCGAAGATGGAGCCTTTTGTCCGCAGGTTAATGCCCAGAGGGTGTTTGCA
TAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGTAGTAGGAAGGGCCAGGCATCAGTCTGTGCCAGGCTACAGGAGTAAGAAACTCAAATACTTTAGAGTTAGAAAGATTGACTGGGATGAAGTGATTATCATTAC
TAAAAGAGACTTTCATGATGACTGGGGAAGGATCCTCGACATTCTTCAGAGGCAACTAGAGAGTGGTCTTGTGATAAACCCCTTCCAACCGGATAAAGCCCTGCTTAAAT
GCCCATCCAAGGAGCTGGTGAATTTATTAACAACAAACAAAGGATGGGTCAGCTTTGGACCTGTGATTTTAAAAGTCGAAAAATGGAATAGAATGAGGCATTGTAGAATT
AATGTGGTGCCATGTTATGGTGGTTGGGTGAGAATCAGAAACCTCCCGTTGCATTTATGGAACATCAGTATATTTAAAGCTATTGGAGATTGCTTGGGGGGGGAAGTCGA
AGTTATTGACGGAGACCAAGTCTTCAGAGCGCAAATCGTTACATTTCAAGATGGTAACCTGCTCATCGATCGTGTGGCCGGAATTCATGGAAGTTTCTCGTCGGCGGCAT
CACATGCTTTCCACAGAGGGCCGATGGATCCCGAGTTTAGCACAGCAGACAAATGGAGAATCGAAGATGGAGCCTTTTGTCCGCAGGTTAATGCCCAGAGGGTGTTTGCA
TAA
Protein sequenceShow/hide protein sequence
MSVVGRARHQSVPGYRSKKLKYFRVRKIDWDEVIIITKRDFHDDWGRILDILQRQLESGLVINPFQPDKALLKCPSKELVNLLTTNKGWVSFGPVILKVEKWNRMRHCRI
NVVPCYGGWVRIRNLPLHLWNISIFKAIGDCLGGEVEVIDGDQVFRAQIVTFQDGNLLIDRVAGIHGSFSSAASHAFHRGPMDPEFSTADKWRIEDGAFCPQVNAQRVFA