; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0014512 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014512
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr12:1554378..1555001
RNA-Seq ExpressionLag0014512
SyntenyLag0014512
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5546643.1 hypothetical protein RHGRI_018725 [Rhododendron griersonianum]4.2e-1930.77Show/hide
Query:  VWKSLWETKASPRAKICAWKAINDIIPTKANIRKKWISLNPLCSFCGSYVENSSHIFWECKVPKEVWKIIIPASLDLFSNCRLH-WTPMDYW----HWLT
        +WK +W  K  PR K   W+AI + + TK N+  +  + NPLC +CG+ VE+  HIF+ C+   EVW      +  +F   R+     +  W    H   
Subjt:  VWKSLWETKASPRAKICAWKAINDIIPTKANIRKKWISLNPLCSFCGSYVENSSHIFWECKVPKEVWKIIIPASLDLFSNCRLH-WTPMDYW----HWLT

Query:  EKSSKEELDLAIILIWAIWNARNRASSNNTRIEADHILAAVNLAWNEIENPNQKKGIEKAR--NQASHATWEKPPPNRWKLNADASWYASSREAA
          S  E+L +   L WAIW  RN    +NT  +   ++        E       K    AR   + +  TW++PP +RWK N D ++  S + AA
Subjt:  EKSSKEELDLAIILIWAIWNARNRASSNNTRIEADHILAAVNLAWNEIENPNQKKGIEKAR--NQASHATWEKPPPNRWKLNADASWYASSREAA

XP_021766279.1 uncharacterized protein LOC110730762 [Chenopodium quinoa]1.8e-1729.35Show/hide
Query:  PSNLAKVWKSLWETKASPRAKICAWKAINDIIPTKANIRKKWISLNPLCSFCGSYVENSSHIFWECKVPKEVWKIIIPASLDLFSNCRLHWTPMDYWHWL
        PS +   W  +      PR KI AW+A  + IPT   I  +  + +  C  CG   E + H   EC + +E+W     + +   S   L    +D+W W 
Subjt:  PSNLAKVWKSLWETKASPRAKICAWKAINDIIPTKANIRKKWISLNPLCSFCGSYVENSSHIFWECKVPKEVWKIIIPASLDLFSNCRLHWTPMDYWHWL

Query:  TEKSSKEELDLAIILIWAIWNARNRASSNNTRIEADHILAAVNLAWNEIENPNQKKGIEKARNQASHATWEKPPPNRWKLNADA
         ++  + E++  I L WAIWNARN+A     ++E   +L+       E+     KKG  +A  +   A W+ P     K+N DA
Subjt:  TEKSSKEELDLAIILIWAIWNARNRASSNNTRIEADHILAAVNLAWNEIENPNQKKGIEKARNQASHATWEKPPPNRWKLNADA

XP_023871998.1 uncharacterized protein LOC111984613 [Quercus suber]3.9e-1726.73Show/hide
Query:  GRFSLNEASQSNPSNLAKVWKSLWETKASPRAKICAWKAINDIIPTKANIRKKWISLNPLCSFCGSYVENSSHIFWECKVPKEVW---KIIIPASLDLFS
        G  + +E   S+ + + K+W+S+W  K   + +  AWKA   I+PTK N++++ +  + LC  CG   EN SH+FW C+   EVW   K++ P  ++   
Subjt:  GRFSLNEASQSNPSNLAKVWKSLWETKASPRAKICAWKAINDIIPTKANIRKKWISLNPLCSFCGSYVENSSHIFWECKVPKEVW---KIIIPASLDLFS

Query:  NCRLHWTPMD-YWHWLTEKSSKEE-LDLAIILIWAIWNARNRASSNNTRIEADHILAAVNLAWNEIENPNQKKGIEKARNQASHATWEKPPPNRWKLNAD
             W  +D  W  + ++ +  + L+  + + W IW  RN      TR +     A V+ A   +E       +  +        W  P   ++KLN D
Subjt:  NCRLHWTPMD-YWHWLTEKSSKEE-LDLAIILIWAIWNARNRASSNNTRIEADHILAAVNLAWNEIENPNQKKGIEKARNQASHATWEKPPPNRWKLNAD

Query:  AS
         +
Subjt:  AS

XP_030964645.1 uncharacterized protein LOC115985893 [Quercus lobata]3.0e-1726.37Show/hide
Query:  SNPSNLAKVWKSLWETKASPRAKICAWKAINDIIPTKANIRKKWISLNPLCSFCGSYVENSSHIFWECKVPKEVWKIIIPASLDLFSNC----RLHWTPM
        SN + + K W  +W  +   + +   W+A  +I+PTKAN+ ++ I+ + +C  CG++ E +SH+ W C   KEVWK +   +  +   C     L W   
Subjt:  SNPSNLAKVWKSLWETKASPRAKICAWKAINDIIPTKANIRKKWISLNPLCSFCGSYVENSSHIFWECKVPKEVWKIIIPASLDLFSNC----RLHWTPM

Query:  DYWHWLTEKSSKEELDLAIILIWAIWNARNRASSNNTRIEADHILAAVNLAWNE--IENPNQKKGIEKARNQASHATWEKPPPNRWKLNADASWYASSRE
        +   W     ++E++ L ++  W IW  RN       R       AAV   W +  +E+        +   +++  TW+ P P  +K N D + ++  +E
Subjt:  DYWHWLTEKSSKEELDLAIILIWAIWNARNRASSNNTRIEADHILAAVNLAWNE--IENPNQKKGIEKARNQASHATWEKPPPNRWKLNADASWYASSRE

Query:  A
        A
Subjt:  A

XP_042974662.1 uncharacterized protein LOC122306298 [Carya illinoinensis]1.1e-1932.99Show/hide
Query:  SNPSNLAKVWKSLWETKASPRAKICAWKAINDIIPTKANIRKKWISLNPLCSFCGSYVENSSHIFWECKVPKEVWKIIIPASLDLFSNCRLHWTPMDYWH
        SN   L K+WK++W  K   + +I AWKA+ +I+PTK+N++KK +     C FC +  E++ H    C   KEVW +  P+ + +    + H   +D   
Subjt:  SNPSNLAKVWKSLWETKASPRAKICAWKAINDIIPTKANIRKKWISLNPLCSFCGSYVENSSHIFWECKVPKEVWKIIIPASLDLFSNCRLHWTPMDYWH

Query:  WLTEKSSKEELDLAIILIWAIWNARNRASSNNTRIEADHILA---AVNLAWNEIENPNQKKGIEKARNQASHATWEKPPPNRWKLNADASWYAS
         L      + LDL  I+ W+ W  RN     N  +  D IL    A+  ++ E++N    K I   RNQ     WE PPP  +KLN D  + +S
Subjt:  WLTEKSSKEELDLAIILIWAIWNARNRASSNNTRIEADHILA---AVNLAWNEIENPNQKKGIEKARNQASHATWEKPPPNRWKLNADASWYAS

TrEMBL top hitse value%identityAlignment
A0A2N9F647 Uncharacterized protein1.5e-1729.27Show/hide
Query:  SLNEASQSNPSNLAKVWKSLWETKASPRAKICAWKAINDIIPTKANIRKKWISLNPLCSFCGSYVENSSHIFWECKVPKEVWKIIIPASLDLFSNCRLHW
        S  EA  S+   L+  WK+LW T+ +P+ K+ AW+A  +I+PTK  + +K ++    CS+C    E + H+ W C+  ++VWK    +S+ L      + 
Subjt:  SLNEASQSNPSNLAKVWKSLWETKASPRAKICAWKAINDIIPTKANIRKKWISLNPLCSFCGSYVENSSHIFWECKVPKEVWKIIIPASLDLFSNCRLHW

Query:  TPMDYWHWLTEKSSKEELDLAIILIWAIWNARNRAS-SNNTRIEADHILAAVNLAWNEIENPNQKKGIEKARNQASHATWEKPPPNR--WKLNADASWYA
        + +D      +      +++ I   W++W ARN     +     AD  L A   A N +E  N +     AR       W   PPNR  +KLN    W  
Subjt:  TPMDYWHWLTEKSSKEELDLAIILIWAIWNARNRAS-SNNTRIEADHILAAVNLAWNEIENPNQKKGIEKARNQASHATWEKPPPNR--WKLNADASWYA

Query:  SSREA
        + R A
Subjt:  SSREA

A0A2N9FYH3 CCHC-type domain-containing protein1.9e-1729.27Show/hide
Query:  SLNEASQSNPSNLAKVWKSLWETKASPRAKICAWKAINDIIPTKANIRKKWISLNPLCSFCGSYVENSSHIFWECKVPKEVWKIIIPASLDLFSNCRLHW
        S  EA  S+   L+  WK+LW T+ +P+ K+ AW+A  +I+PTK  + +K ++    CS+C    E   H+ W C+  ++VWK    +S+ L      + 
Subjt:  SLNEASQSNPSNLAKVWKSLWETKASPRAKICAWKAINDIIPTKANIRKKWISLNPLCSFCGSYVENSSHIFWECKVPKEVWKIIIPASLDLFSNCRLHW

Query:  TPMDYWHWLTEKSSKEELDLAIILIWAIWNARNRAS-SNNTRIEADHILAAVNLAWNEIENPNQKKGIEKARNQASHATWEKPPPNR--WKLNADASWYA
        + +D      +      +++ I   W++W ARN     +     AD  L A   A N +E  N +     AR       W   PPNR  +KLN    W  
Subjt:  TPMDYWHWLTEKSSKEELDLAIILIWAIWNARNRAS-SNNTRIEADHILAAVNLAWNEIENPNQKKGIEKARNQASHATWEKPPPNR--WKLNADASWYA

Query:  SSREA
        + R A
Subjt:  SSREA

A0A2N9HIY9 Uncharacterized protein3.8e-1828.57Show/hide
Query:  SLNEASQSNPSNLAKVWKSLWETKASPRAKICAWKAINDIIPTKANIRKKWISLNPLCSFCGSYVENSSHIFWECKVPKEVWKIIIPASLDLFSNCRLHW
        S  EA  S+   L+  WK+LW T+ +P+ K+ AW+A  +I+PTK  + +K ++    CS+C    E   H+ W C+  ++VWK    +S+ L      + 
Subjt:  SLNEASQSNPSNLAKVWKSLWETKASPRAKICAWKAINDIIPTKANIRKKWISLNPLCSFCGSYVENSSHIFWECKVPKEVWKIIIPASLDLFSNCRLHW

Query:  TPMDYWHWLTEKSSKEELDLAIILIWAIWNARNRAS-SNNTRIEADHILAAVNLAWNEIENPNQKKGIEKARNQASHATWEKPPPNRWKLNADASWYASS
        + +D    L +      +++ I   W++W ARN     +     AD  L A   A N +E  N +     AR       W  P    +KLN    W  + 
Subjt:  TPMDYWHWLTEKSSKEELDLAIILIWAIWNARNRAS-SNNTRIEADHILAAVNLAWNEIENPNQKKGIEKARNQASHATWEKPPPNRWKLNADASWYASS

Query:  REA
        R A
Subjt:  REA

A0A2N9J5D9 CCHC-type domain-containing protein3.8e-1828.57Show/hide
Query:  SLNEASQSNPSNLAKVWKSLWETKASPRAKICAWKAINDIIPTKANIRKKWISLNPLCSFCGSYVENSSHIFWECKVPKEVWKIIIPASLDLFSNCRLHW
        S  EA  S+   L+  WK+LW T+ +P+ K+ AW+A  +I+PTK  + +K ++    CS+C    E   H+ W C+  ++VWK    +S+ L      + 
Subjt:  SLNEASQSNPSNLAKVWKSLWETKASPRAKICAWKAINDIIPTKANIRKKWISLNPLCSFCGSYVENSSHIFWECKVPKEVWKIIIPASLDLFSNCRLHW

Query:  TPMDYWHWLTEKSSKEELDLAIILIWAIWNARNRAS-SNNTRIEADHILAAVNLAWNEIENPNQKKGIEKARNQASHATWEKPPPNRWKLNADASWYASS
        + +D    L +      +++ I   W++W ARN     +     AD  L A   A N +E  N +     AR       W  P    +KLN    W  + 
Subjt:  TPMDYWHWLTEKSSKEELDLAIILIWAIWNARNRAS-SNNTRIEADHILAAVNLAWNEIENPNQKKGIEKARNQASHATWEKPPPNRWKLNADASWYASS

Query:  REA
        R A
Subjt:  REA

M5Y023 zf-RVT domain-containing protein (Fragment)8.6e-1827.86Show/hide
Query:  SLNEASQSNPSNLAKVWKSLWETKASPRAKICAWKAINDIIPTKANIRKKWISLNPLCSFCGSYVENSSHIFWECKVPKEVWKIIIPASLDLFSNCRLHW
        S   AS SN   +A+ W  LW+     R K   W+ I+ I+PTKAN+ +K +SL+  C  C   VE+S HI  +C      W+    +S    +      
Subjt:  SLNEASQSNPSNLAKVWKSLWETKASPRAKICAWKAINDIIPTKANIRKKWISLNPLCSFCGSYVENSSHIFWECKVPKEVWKIIIPASLDLFSNCRLHW

Query:  TPMDYWHWLTEKSSKEELDLAIILIWAIWNARNRASSNNTRIEADHILAAVNLAWNEIENPNQKKGIEKARNQASHATWEKPPPNRWKLNADASWYASSR
        +P D+     E+ S ++    +++ WAIW ARN    NN +   + +    +L   +    +   G +  + Q     W+ P  N  K+N D +W   + 
Subjt:  TPMDYWHWLTEKSSKEELDLAIILIWAIWNARNRASSNNTRIEADHILAAVNLAWNEIENPNQKKGIEKARNQASHATWEKPPPNRWKLNADASWYASSR

Query:  E
        E
Subjt:  E

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G10000.1 Ribonuclease H-like superfamily protein8.2e-0523.94Show/hide
Query:  PRAKICAWKAINDIIPTKANIRKKWISLNPLCSFCGSYVENSSHIFWECKVPKEVWKII------IPASLDLFSNCRLHWTPMDYWHWLTEKSSKEELDL
        P+ K+  WKA    +P  A + ++ IS    C+ CG+  E S+H+ + C    +VW +       IP    +     L    +     +          L
Subjt:  PRAKICAWKAINDIIPTKANIRKKWISLNPLCSFCGSYVENSSHIFWECKVPKEVWKII------IPASLDLFSNCRLHWTPMDYWHWLTEKSSKEELDL

Query:  AIILIWAIWNARNRASSNNTRIEA-DHILAAVN--LAWNEIE
           + W IW ARN+    N+     + +  AV   LAW   +
Subjt:  AIILIWAIWNARNRASSNNTRIEA-DHILAAVN--LAWNEIE

AT2G02520.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.1e-0623.81Show/hide
Query:  WKSLWETKASPRAKICAWKAINDIIPTKANIRKKWISLNPLCSFCGSYVENSSHIFWECKVPKEVWKIIIPASLDLFSNCRLHWTP----MDYWHWLTEK
        +K++W     P+    AW  +   + TK  +        PLC FC ++ E   H+F++C+  +EVW         ++   R+H  P     D   WL   
Subjt:  WKSLWETKASPRAKICAWKAINDIIPTKANIRKKWISLNPLCSFCGSYVENSSHIFWECKVPKEVWKIIIPASLDLFSNCRLHWTP----MDYWHWLTEK

Query:  SSKEELDLAIIL-----IWAIWNARN
           + +   + L     ++ IW  RN
Subjt:  SSKEELDLAIIL-----IWAIWNARN

AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein5.1e-0733.8Show/hide
Query:  LWETKASPRAKICAWKAINDIIPTKANIRKKWISLNPLCSFCGSYVENSSHIFWECKVPKE--VWKIIIPA
        +W  K SP+ K+  WKA+N+ +P  A +  + IS+ P C+ C  + E  +HI + C   +   + K II A
Subjt:  LWETKASPRAKICAWKAINDIIPTKANIRKKWISLNPLCSFCGSYVENSSHIFWECKVPKE--VWKIIIPA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAGATTCTCCCTCAATGAAGCTTCCCAATCGAATCCCTCTAATCTTGCAAAGGTTTGGAAATCCTTATGGGAAACGAAAGCTAGTCCAAGAGCCAAAATTTGTGC
TTGGAAAGCCATCAACGATATAATCCCAACAAAGGCCAACATAAGGAAAAAATGGATATCTCTTAACCCTCTCTGTTCTTTTTGTGGTTCCTATGTGGAAAATTCCAGTC
ACATCTTTTGGGAATGCAAAGTTCCCAAAGAGGTTTGGAAAATTATTATCCCAGCCTCACTTGATTTGTTCTCAAATTGCAGGCTTCATTGGACTCCCATGGACTATTGG
CATTGGTTAACAGAAAAATCAAGCAAAGAGGAATTAGACTTGGCGATTATCCTAATTTGGGCTATTTGGAATGCAAGGAATAGAGCATCATCAAACAACACAAGAATTGA
GGCAGATCATATCCTTGCAGCAGTCAATTTAGCGTGGAATGAGATAGAAAATCCTAACCAGAAAAAGGGGATCGAAAAGGCGAGGAACCAGGCGAGTCATGCCACTTGGG
AAAAACCTCCCCCGAACAGATGGAAGCTGAATGCGGATGCTTCCTGGTACGCGAGCTCGAGAGAGGCGGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTAGATTCTCCCTCAATGAAGCTTCCCAATCGAATCCCTCTAATCTTGCAAAGGTTTGGAAATCCTTATGGGAAACGAAAGCTAGTCCAAGAGCCAAAATTTGTGC
TTGGAAAGCCATCAACGATATAATCCCAACAAAGGCCAACATAAGGAAAAAATGGATATCTCTTAACCCTCTCTGTTCTTTTTGTGGTTCCTATGTGGAAAATTCCAGTC
ACATCTTTTGGGAATGCAAAGTTCCCAAAGAGGTTTGGAAAATTATTATCCCAGCCTCACTTGATTTGTTCTCAAATTGCAGGCTTCATTGGACTCCCATGGACTATTGG
CATTGGTTAACAGAAAAATCAAGCAAAGAGGAATTAGACTTGGCGATTATCCTAATTTGGGCTATTTGGAATGCAAGGAATAGAGCATCATCAAACAACACAAGAATTGA
GGCAGATCATATCCTTGCAGCAGTCAATTTAGCGTGGAATGAGATAGAAAATCCTAACCAGAAAAAGGGGATCGAAAAGGCGAGGAACCAGGCGAGTCATGCCACTTGGG
AAAAACCTCCCCCGAACAGATGGAAGCTGAATGCGGATGCTTCCTGGTACGCGAGCTCGAGAGAGGCGGCTTAG
Protein sequenceShow/hide protein sequence
MGRFSLNEASQSNPSNLAKVWKSLWETKASPRAKICAWKAINDIIPTKANIRKKWISLNPLCSFCGSYVENSSHIFWECKVPKEVWKIIIPASLDLFSNCRLHWTPMDYW
HWLTEKSSKEELDLAIILIWAIWNARNRASSNNTRIEADHILAAVNLAWNEIENPNQKKGIEKARNQASHATWEKPPPNRWKLNADASWYASSREAA