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Lag0014522 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014522
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein SHORT HYPOCOTYL IN WHITE LIGHT 1
Genome locationchr12:1690893..1691632
RNA-Seq ExpressionLag0014522
SyntenyLag0014522
Gene Ontology termsGO:0009787 - regulation of abscisic acid-activated signaling pathway (biological process)
GO:0010100 - negative regulation of photomorphogenesis (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039324 - Protein SHORT HYPOCOTYL IN WHITE LIGHT 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022508.1 Protein SHORT HYPOCOTYL IN WHITE LIGHT 1, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-4866.85Show/hide
Query:  FAEQRQKHLAKAGKFSSSSTADYVLSRRSFAVVLLLHTPISTAISNFSSFASLPSLPNFSHTPPGFKKNLQSLSGPSDFSFHLLTFFFRAFLFSIYSIIF
        F +Q+ K  A       SSTAD+VL+ RSF  V L H+  S AI+N S   SLP L NFSH PPGF+KNLQ LSGP DFS  L  F F  F+ ++   +F
Subjt:  FAEQRQKHLAKAGKFSSSSTADYVLSRRSFAVVLLLHTPISTAISNFSSFASLPSLPNFSHTPPGFKKNLQSLSGPSDFSFHLLTFFFRAFLFSIYSIIF

Query:  QGVDNLVDDRRNWNRSIGSDFDVIGGEDEEEDEEEEEEDEEEDRSLDLLVRFVENVFRKVSRRARKAVRSVLPQSIPTKLV
        QGVD+LVDDRRNWNRSI SDFD+IGGED+E+D  E+EE+EEEDRSLDLLVRFVENVFRKVS+RARKAVRSVLPQSIPTKLV
Subjt:  QGVDNLVDDRRNWNRSIGSDFDVIGGEDEEEDEEEEEEDEEEDRSLDLLVRFVENVFRKVSRRARKAVRSVLPQSIPTKLV

XP_022148690.1 protein SHORT HYPOCOTYL IN WHITE LIGHT 1 [Momordica charantia]2.8e-2966.92Show/hide
Query:  SLPSLPNFSHTPPGFKKNLQSLSGPSDFSFHLLTFFFRAFLFSIYSIIFQGVDNLVDDRRNWNRSIGSDFDVIGGEDEEEDEEEEEEDEEEDRSLDLLVR
        SL S+P +   P         LS P   S  LL    R   FS      QGVDNLVDDRRNWNR I SDFD++GGED+EED EE+EEDEEEDRSLDLLVR
Subjt:  SLPSLPNFSHTPPGFKKNLQSLSGPSDFSFHLLTFFFRAFLFSIYSIIFQGVDNLVDDRRNWNRSIGSDFDVIGGEDEEEDEEEEEEDEEEDRSLDLLVR

Query:  FVENVFRKVSRRARKAVRSVLPQSIPTKLV
        FVENVFRKVS+RARKAVRSVLPQSIPTKLV
Subjt:  FVENVFRKVSRRARKAVRSVLPQSIPTKLV

XP_022972529.1 protein SHORT HYPOCOTYL IN WHITE LIGHT 1-like [Cucurbita maxima]2.6e-2766.41Show/hide
Query:  SLPSLPNFSHTPPGFKKNLQSLSGPSDFSFHLLTFFFRAFLFSIYSIIFQGVDNLVDDRRNWNRSIGSDFDVIGGEDEE-EDEEEEEEDEEEDRSLDLLV
        SL ++P +   PP        LS P   S  LL    RA  FS      QGVDN VDDRRNWN SIGSDFD+IGGE+EE E+E+EE+ED+EEDRSLDLLV
Subjt:  SLPSLPNFSHTPPGFKKNLQSLSGPSDFSFHLLTFFFRAFLFSIYSIIFQGVDNLVDDRRNWNRSIGSDFDVIGGEDEE-EDEEEEEEDEEEDRSLDLLV

Query:  RFVENVFRKVSRRARKAVRSVLPQSIPTKLV
        +FVENVFRKVSRRARKAVRSVLPQSIPTKLV
Subjt:  RFVENVFRKVSRRARKAVRSVLPQSIPTKLV

XP_023530484.1 LOW QUALITY PROTEIN: protein SHORT HYPOCOTYL IN WHITE LIGHT 1-like [Cucurbita pepo subsp. pepo]2.6e-2764.89Show/hide
Query:  SLPSLPNFSHTPPGFKKNLQSLSGPS-DFSFHLLTFFFRAFLFSIYSIIFQGVDNLVDDRRNWNRSIGSDFDVIGGEDEEEDEEEEEEDEEEDRSLDLLV
        S PSL +  H+ P    +  S+   S   S  LL    R   FS      QGVD+LVDDRRNWNRSI SDFD+IGGED+E+D  E+EE+EEEDRSLDLLV
Subjt:  SLPSLPNFSHTPPGFKKNLQSLSGPS-DFSFHLLTFFFRAFLFSIYSIIFQGVDNLVDDRRNWNRSIGSDFDVIGGEDEEEDEEEEEEDEEEDRSLDLLV

Query:  RFVENVFRKVSRRARKAVRSVLPQSIPTKLV
        RFVENVFRKVS+RARKAVRSVLPQSIPTKLV
Subjt:  RFVENVFRKVSRRARKAVRSVLPQSIPTKLV

XP_038877542.1 protein SHORT HYPOCOTYL IN WHITE LIGHT 1 [Benincasa hispida]4.3e-3067.15Show/hide
Query:  NFSSFASLPSLPNFSHTPPGFKKNLQS-LSGPSDFSFHLLTFFFRAFLFSIYSIIFQGVDNLVDDRRNWNRSIGSDFDVIGGEDEEEDEEEEEEDEEEDR
        + S+  S PSL +   + P F  +  S LS P   S  LL    R   FS      QGVDNLVDDRRNWNRSIGSDFD+IGGE EEED+++E+EDEEEDR
Subjt:  NFSSFASLPSLPNFSHTPPGFKKNLQS-LSGPSDFSFHLLTFFFRAFLFSIYSIIFQGVDNLVDDRRNWNRSIGSDFDVIGGEDEEEDEEEEEEDEEEDR

Query:  SLDLLVRFVENVFRKVSRRARKAVRSVLPQSIPTKLV
        SLDLLVRFVENVFRKVSRRARKAVRSVLPQSIPTKLV
Subjt:  SLDLLVRFVENVFRKVSRRARKAVRSVLPQSIPTKLV

TrEMBL top hitse value%identityAlignment
A0A1S3C0Q8 uncharacterized protein LOC1034953232.1e-2765.65Show/hide
Query:  SLPSLPNFSHTPPGFKKNLQS-LSGPSDFSFHLLTFFFRAFLFSIYSIIFQGVDNLVDDRRNWNRSIGSDFDVIGGEDEEEDEEEEEEDEEEDRSLDLLV
        S PSL +   + P F  +  S LS P   S+ LL    R   FS      QGVDN VD+RRNWNR   SDFD+IGGE+EEE+EEEE++DEEEDRSLDLLV
Subjt:  SLPSLPNFSHTPPGFKKNLQS-LSGPSDFSFHLLTFFFRAFLFSIYSIIFQGVDNLVDDRRNWNRSIGSDFDVIGGEDEEEDEEEEEEDEEEDRSLDLLV

Query:  RFVENVFRKVSRRARKAVRSVLPQSIPTKLV
        RFVENVFRK SRRARKAVRSVLPQSIPTKLV
Subjt:  RFVENVFRKVSRRARKAVRSVLPQSIPTKLV

A0A5A7SL74 ATP phosphoribosyltransferase regulatory subunit2.1e-2765.65Show/hide
Query:  SLPSLPNFSHTPPGFKKNLQS-LSGPSDFSFHLLTFFFRAFLFSIYSIIFQGVDNLVDDRRNWNRSIGSDFDVIGGEDEEEDEEEEEEDEEEDRSLDLLV
        S PSL +   + P F  +  S LS P   S+ LL    R   FS      QGVDN VD+RRNWNR   SDFD+IGGE+EEE+EEEE++DEEEDRSLDLLV
Subjt:  SLPSLPNFSHTPPGFKKNLQS-LSGPSDFSFHLLTFFFRAFLFSIYSIIFQGVDNLVDDRRNWNRSIGSDFDVIGGEDEEEDEEEEEEDEEEDRSLDLLV

Query:  RFVENVFRKVSRRARKAVRSVLPQSIPTKLV
        RFVENVFRK SRRARKAVRSVLPQSIPTKLV
Subjt:  RFVENVFRKVSRRARKAVRSVLPQSIPTKLV

A0A5D3C665 ATP phosphoribosyltransferase regulatory subunit2.1e-2765.65Show/hide
Query:  SLPSLPNFSHTPPGFKKNLQS-LSGPSDFSFHLLTFFFRAFLFSIYSIIFQGVDNLVDDRRNWNRSIGSDFDVIGGEDEEEDEEEEEEDEEEDRSLDLLV
        S PSL +   + P F  +  S LS P   S+ LL    R   FS      QGVDN VD+RRNWNR   SDFD+IGGE+EEE+EEEE++DEEEDRSLDLLV
Subjt:  SLPSLPNFSHTPPGFKKNLQS-LSGPSDFSFHLLTFFFRAFLFSIYSIIFQGVDNLVDDRRNWNRSIGSDFDVIGGEDEEEDEEEEEEDEEEDRSLDLLV

Query:  RFVENVFRKVSRRARKAVRSVLPQSIPTKLV
        RFVENVFRK SRRARKAVRSVLPQSIPTKLV
Subjt:  RFVENVFRKVSRRARKAVRSVLPQSIPTKLV

A0A6J1D3L5 protein SHORT HYPOCOTYL IN WHITE LIGHT 11.3e-2966.92Show/hide
Query:  SLPSLPNFSHTPPGFKKNLQSLSGPSDFSFHLLTFFFRAFLFSIYSIIFQGVDNLVDDRRNWNRSIGSDFDVIGGEDEEEDEEEEEEDEEEDRSLDLLVR
        SL S+P +   P         LS P   S  LL    R   FS      QGVDNLVDDRRNWNR I SDFD++GGED+EED EE+EEDEEEDRSLDLLVR
Subjt:  SLPSLPNFSHTPPGFKKNLQSLSGPSDFSFHLLTFFFRAFLFSIYSIIFQGVDNLVDDRRNWNRSIGSDFDVIGGEDEEEDEEEEEEDEEEDRSLDLLVR

Query:  FVENVFRKVSRRARKAVRSVLPQSIPTKLV
        FVENVFRKVS+RARKAVRSVLPQSIPTKLV
Subjt:  FVENVFRKVSRRARKAVRSVLPQSIPTKLV

A0A6J1I8W5 protein SHORT HYPOCOTYL IN WHITE LIGHT 1-like1.3e-2766.41Show/hide
Query:  SLPSLPNFSHTPPGFKKNLQSLSGPSDFSFHLLTFFFRAFLFSIYSIIFQGVDNLVDDRRNWNRSIGSDFDVIGGEDEE-EDEEEEEEDEEEDRSLDLLV
        SL ++P +   PP        LS P   S  LL    RA  FS      QGVDN VDDRRNWN SIGSDFD+IGGE+EE E+E+EE+ED+EEDRSLDLLV
Subjt:  SLPSLPNFSHTPPGFKKNLQSLSGPSDFSFHLLTFFFRAFLFSIYSIIFQGVDNLVDDRRNWNRSIGSDFDVIGGEDEE-EDEEEEEEDEEEDRSLDLLV

Query:  RFVENVFRKVSRRARKAVRSVLPQSIPTKLV
        +FVENVFRKVSRRARKAVRSVLPQSIPTKLV
Subjt:  RFVENVFRKVSRRARKAVRSVLPQSIPTKLV

SwissProt top hitse value%identityAlignment
F4I3V6 Protein SHORT HYPOCOTYL IN WHITE LIGHT 12.5e-0440.62Show/hide
Query:  GSDFDVIGGEDEEEDEEEEEEDEEEDRSLDLLVRFVENVFRKVSRRARKAVRSVLPQSIPTKLV
        G ++DV+  +D   D+++EE++ E   S+DLL+RF+ ++F+KVS+R +KA R +LP ++  +LV
Subjt:  GSDFDVIGGEDEEEDEEEEEEDEEEDRSLDLLVRFVENVFRKVSRRARKAVRSVLPQSIPTKLV

Arabidopsis top hitse value%identityAlignment
AT1G69935.1 short hypocotyl in white light11.7e-0540.62Show/hide
Query:  GSDFDVIGGEDEEEDEEEEEEDEEEDRSLDLLVRFVENVFRKVSRRARKAVRSVLPQSIPTKLV
        G ++DV+  +D   D+++EE++ E   S+DLL+RF+ ++F+KVS+R +KA R +LP ++  +LV
Subjt:  GSDFDVIGGEDEEEDEEEEEEDEEEDRSLDLLVRFVENVFRKVSRRARKAVRSVLPQSIPTKLV

AT4G33780.1 FUNCTIONS IN: molecular_function unknown1.2e-1764.2Show/hide
Query:  GVDNLVDDRRNWNRSIGSDFDVIGGEDEEEDEEEEEED-EEEDRSLDLLVRFVENVFRKVSRRARKAVRSVLPQSIPTKLV
        G D+  DD R+WNR I  ++    G DE+ D EE+++D EEEDRSLDLL+RFVENVFRK+S+RARKAVRS+LP SI TKLV
Subjt:  GVDNLVDDRRNWNRSIGSDFDVIGGEDEEEDEEEEEED-EEEDRSLDLLVRFVENVFRKVSRRARKAVRSVLPQSIPTKLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAAAATCCTCAGCAACTGTCAACCATCGTTTTTGCTGAACAGAGACAAAAGCACCTGGCAAAGGCTGGAAAATTCTCTTCTTCTTCAACAGCTGACTATGTCCT
TTCCCGCCGCTCTTTCGCCGTCGTCCTTCTTCTCCATACCCCAATCTCAACCGCCATTTCCAACTTCTCGAGCTTCGCTTCTCTCCCATCCCTTCCAAATTTCTCACACA
CTCCTCCGGGCTTCAAGAAGAACCTCCAATCTCTCTCAGGTCCTTCCGATTTCTCTTTCCATCTATTGACCTTTTTTTTTCGTGCGTTTTTGTTCTCAATTTACTCGATT
ATCTTCCAGGGAGTTGATAATTTGGTGGACGATCGGCGCAATTGGAACCGCTCGATTGGTTCCGACTTCGACGTAATCGGTGGAGAGGACGAGGAGGAGGACGAGGAGGA
GGAGGAGGAGGATGAGGAAGAGGATAGAAGTTTGGATCTATTGGTTCGGTTTGTTGAGAATGTTTTCAGGAAGGTCTCGAGGCGAGCCCGAAAGGCTGTGAGATCAGTTC
TTCCCCAATCCATCCCTACTAAATTGGTAGACGTTTATTTAGCTCGTGGGATTTTCTGTCAATGGGGTGCTAATGCTGACGTTTTTGTGGGTTTTGAAGGCATTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAAAATCCTCAGCAACTGTCAACCATCGTTTTTGCTGAACAGAGACAAAAGCACCTGGCAAAGGCTGGAAAATTCTCTTCTTCTTCAACAGCTGACTATGTCCT
TTCCCGCCGCTCTTTCGCCGTCGTCCTTCTTCTCCATACCCCAATCTCAACCGCCATTTCCAACTTCTCGAGCTTCGCTTCTCTCCCATCCCTTCCAAATTTCTCACACA
CTCCTCCGGGCTTCAAGAAGAACCTCCAATCTCTCTCAGGTCCTTCCGATTTCTCTTTCCATCTATTGACCTTTTTTTTTCGTGCGTTTTTGTTCTCAATTTACTCGATT
ATCTTCCAGGGAGTTGATAATTTGGTGGACGATCGGCGCAATTGGAACCGCTCGATTGGTTCCGACTTCGACGTAATCGGTGGAGAGGACGAGGAGGAGGACGAGGAGGA
GGAGGAGGAGGATGAGGAAGAGGATAGAAGTTTGGATCTATTGGTTCGGTTTGTTGAGAATGTTTTCAGGAAGGTCTCGAGGCGAGCCCGAAAGGCTGTGAGATCAGTTC
TTCCCCAATCCATCCCTACTAAATTGGTAGACGTTTATTTAGCTCGTGGGATTTTCTGTCAATGGGGTGCTAATGCTGACGTTTTTGTGGGTTTTGAAGGCATTTCTTGA
Protein sequenceShow/hide protein sequence
MAKNPQQLSTIVFAEQRQKHLAKAGKFSSSSTADYVLSRRSFAVVLLLHTPISTAISNFSSFASLPSLPNFSHTPPGFKKNLQSLSGPSDFSFHLLTFFFRAFLFSIYSI
IFQGVDNLVDDRRNWNRSIGSDFDVIGGEDEEEDEEEEEEDEEEDRSLDLLVRFVENVFRKVSRRARKAVRSVLPQSIPTKLVDVYLARGIFCQWGANADVFVGFEGIS