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Lag0014524 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014524
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description16S rRNA (uracil(1498)-N(3))-methyltransferase
Genome locationchr12:1699046..1700396
RNA-Seq ExpressionLag0014524
SyntenyLag0014524
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR029026 - tRNA (guanine-N1-)-methyltransferase, N-terminal
IPR029028 - Alpha/beta knot methyltransferases


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031377.1 ribosomal RNA small subunit methyltransferase E [Cucumis melo var. makuwa]3.9e-07100Show/hide
Query:  MMKEAGAIAVGLGPYRLRVETATVAILSTLMLW
        MMKEAGAIAVGLGPYRLRVETATVAILSTLMLW
Subjt:  MMKEAGAIAVGLGPYRLRVETATVAILSTLMLW
TYK06829.1 ribosomal RNA small subunit methyltransferase E [Cucumis melo var. makuwa]3.9e-07100Show/hide
Query:  MMKEAGAIAVGLGPYRLRVETATVAILSTLMLW
        MMKEAGAIAVGLGPYRLRVETATVAILSTLMLW
Subjt:  MMKEAGAIAVGLGPYRLRVETATVAILSTLMLW
XP_004136932.2 uncharacterized protein LOC101213733 isoform X1 [Cucumis sativus]3.9e-07100Show/hide
Query:  MMKEAGAIAVGLGPYRLRVETATVAILSTLMLW
        MMKEAGAIAVGLGPYRLRVETATVAILSTLMLW
Subjt:  MMKEAGAIAVGLGPYRLRVETATVAILSTLMLW
XP_008455052.1 PREDICTED: ribosomal RNA small subunit methyltransferase E [Cucumis melo]3.9e-07100Show/hide
Query:  MMKEAGAIAVGLGPYRLRVETATVAILSTLMLW
        MMKEAGAIAVGLGPYRLRVETATVAILSTLMLW
Subjt:  MMKEAGAIAVGLGPYRLRVETATVAILSTLMLW
XP_031744710.1 uncharacterized protein LOC101213733 isoform X2 [Cucumis sativus]3.9e-07100Show/hide
Query:  MMKEAGAIAVGLGPYRLRVETATVAILSTLMLW
        MMKEAGAIAVGLGPYRLRVETATVAILSTLMLW
Subjt:  MMKEAGAIAVGLGPYRLRVETATVAILSTLMLW
TrEMBL top hitse value%identityAlignment
A0A1S3BZZ7 16S rRNA (uracil(1498)-N(3))-methyltransferase1.9e-07100Show/hide
Query:  MMKEAGAIAVGLGPYRLRVETATVAILSTLMLW
        MMKEAGAIAVGLGPYRLRVETATVAILSTLMLW
Subjt:  MMKEAGAIAVGLGPYRLRVETATVAILSTLMLW
A0A5A7SPG3 16S rRNA (uracil(1498)-N(3))-methyltransferase1.9e-07100Show/hide
Query:  MMKEAGAIAVGLGPYRLRVETATVAILSTLMLW
        MMKEAGAIAVGLGPYRLRVETATVAILSTLMLW
Subjt:  MMKEAGAIAVGLGPYRLRVETATVAILSTLMLW
A0A5D3C8Z9 16S rRNA (uracil(1498)-N(3))-methyltransferase1.9e-07100Show/hide
Query:  MMKEAGAIAVGLGPYRLRVETATVAILSTLMLW
        MMKEAGAIAVGLGPYRLRVETATVAILSTLMLW
Subjt:  MMKEAGAIAVGLGPYRLRVETATVAILSTLMLW
A0A6J1GL34 16S rRNA (uracil(1498)-N(3))-methyltransferase7.1e-0796.97Show/hide
Query:  MMKEAGAIAVGLGPYRLRVETATVAILSTLMLW
        MMKEAGAI VGLGPYRLRVETATVAILSTLMLW
Subjt:  MMKEAGAIAVGLGPYRLRVETATVAILSTLMLW
A0A6J1IBI6 16S rRNA (uracil(1498)-N(3))-methyltransferase5.4e-0796.97Show/hide
Query:  MMKEAGAIAVGLGPYRLRVETATVAILSTLMLW
        M+KEAGAIAVGLGPYRLRVETATVAILSTLMLW
Subjt:  MMKEAGAIAVGLGPYRLRVETATVAILSTLMLW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G50000.1 methyltransferases2.4e-0772.73Show/hide
Query:  MMKEAGAIAVGLGPYRLRVETATVAILSTLMLW
        MM EAG  AVGLGP+RLRVETAT+A+L+TL++W
Subjt:  MMKEAGAIAVGLGPYRLRVETATVAILSTLMLW

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAAAGAAGCAGGAGCAATTGCTGTCGGTCTTGGCCCATATCGACTACGTGTTGAAACTGCAACAGTTGCCATCTTATCAACCCTGATGTTATGGTTAACTAAACC
ATTCGCCCAAGCTTGGAGGGAGGTTAGATTTCAAAAATTTTCTACTGGGAATACTAGAATCCATTCAAGAAGTTTCAACATTCTAATGGTTCACCGATCACGAGGTATCC
TCAAAATCAGCACATTTGCAAAGCCTCGAAGTCGGTGTGTTTGCGGCTTGGGGCATGTAGTACAATTTGAGGCATTCTACAAGAAGGGGATTCCATTTAAGGATTGGTCT
CTGATGATGGGGGACTTCTTGAGGAAGATTACAATTATGTATTTTGATGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGAAAGAAGCAGGAGCAATTGCTGTCGGTCTTGGCCCATATCGACTACGTGTTGAAACTGCAACAGTTGCCATCTTATCAACCCTGATGTTATGGTTAACTAAACC
ATTCGCCCAAGCTTGGAGGGAGGTTAGATTTCAAAAATTTTCTACTGGGAATACTAGAATCCATTCAAGAAGTTTCAACATTCTAATGGTTCACCGATCACGAGGTATCC
TCAAAATCAGCACATTTGCAAAGCCTCGAAGTCGGTGTGTTTGCGGCTTGGGGCATGTAGTACAATTTGAGGCATTCTACAAGAAGGGGATTCCATTTAAGGATTGGTCT
CTGATGATGGGGGACTTCTTGAGGAAGATTACAATTATGTATTTTGATGGTTGA
Protein sequenceShow/hide protein sequence
MMKEAGAIAVGLGPYRLRVETATVAILSTLMLWLTKPFAQAWREVRFQKFSTGNTRIHSRSFNILMVHRSRGILKISTFAKPRSRCVCGLGHVVQFEAFYKKGIPFKDWS
LMMGDFLRKITIMYFDG