CuGenDBv2

Gene ID	Lag0014526
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	INVOLVED IN: photosynthesis; LOCATED IN: photosystem I, chloroplast, thylakoid membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages;
Genome location	chr12:1707613..1709613
RNA-Seq Expression	Lag0014526
Synteny	Lag0014526
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0009507 - chloroplast (cellular component) GO:0009522 - photosystem I (cellular component)
InterPro domains	IPR008796 - Photosystem I reaction centre subunit N, chloroplastic

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008455049.1 PREDICTED: uncharacterized protein LOC103495319 [Cucumis melo]

8.0e-43

79.41

Show/hide

Query:  MSSIGQSILMALAVTLNKFASSNVQSVQKNKLNTPSTATAATAGASQIGRRGLLLSAIAAAAATAPEDAVDSRTQLLKRYLKKSEENKEKNDKERLESYY
        MSSIGQSILMALAVTLNKFASSNVQSVQ+NK    +TAT     +S IGRR LLLS +A A+  A   AVDSRT+LLKRYLKKSEENKEKNDKERLESYY
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQKNKLNTPSTATAATAGASQIGRRGLLLSAIAAAAATAPEDAVDSRTQLLKRYLKKSEENKEKNDKERLESYY

Query:  KRNYKDYFEFVEGSLKNKSELSESEKGIIEWLKRNK
        KRNYKDYFEFVEGS+KNK+ELSE+EKGI+EWLKRNK
Subjt:  KRNYKDYFEFVEGSLKNKSELSESEKGIIEWLKRNK

XP_022927848.1 uncharacterized protein LOC111434615 [Cucurbita moschata]

1.0e-42

77.86

Show/hide

Query:  MSSIGQSILMALAVTLNKFASSNVQSVQKNKLNTPSTAT----AATAGASQIGRRGLLLSAIAAAAATAPEDAVDSRTQLLKRYLKKSEENKEKNDKERL
        MSSIGQ+ILMALA+TLN+FASSNVQSVQ+NK  TP T T    A+T+ +S I RRGLLLSA  AA       AVDSRT+LLKRYLKKSEENKEKNDKERL
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQKNKLNTPSTAT----AATAGASQIGRRGLLLSAIAAAAATAPEDAVDSRTQLLKRYLKKSEENKEKNDKERL

Query:  ESYYKRNYKDYFEFVEGSLKNKSELSESEKGIIEWLKRNK
        ES+YKRNYKDYFEFVEGSLKNK ELSE+EKGIIEWLKRNK
Subjt:  ESYYKRNYKDYFEFVEGSLKNKSELSESEKGIIEWLKRNK

XP_022989008.1 uncharacterized protein LOC111486201 [Cucurbita maxima]

6.1e-43

80.15

Show/hide

Query:  MSSIGQSILMALAVTLNKFASSNVQSVQKNKLNTPSTATAATAGASQIGRRGLLLSAIAAAAATAPEDAVDSRTQLLKRYLKKSEENKEKNDKERLESYY
        MSSIGQ+ILMALA+TLN+FASSNVQSVQ+NK  TP T TA T+ +S I RRGLLLSA  AA       AVDSRT+LLKRYLKKSEENKEKNDKERLES+Y
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQKNKLNTPSTATAATAGASQIGRRGLLLSAIAAAAATAPEDAVDSRTQLLKRYLKKSEENKEKNDKERLESYY

Query:  KRNYKDYFEFVEGSLKNKSELSESEKGIIEWLKRNK
        KRNYKDYFEFVEGSLKNK ELSE+EKGIIEWLKRNK
Subjt:  KRNYKDYFEFVEGSLKNKSELSESEKGIIEWLKRNK

XP_023531124.1 uncharacterized protein LOC111793462 [Cucurbita pepo subsp. pepo]

1.4e-42

77.86

Show/hide

Query:  MSSIGQSILMALAVTLNKFASSNVQSVQKNKLNTPSTATAATA----GASQIGRRGLLLSAIAAAAATAPEDAVDSRTQLLKRYLKKSEENKEKNDKERL
        MSSIGQ+ILMALA+TLN+FASSNVQSVQ+NK  TP T TA T+     +S I RRGLLLSA  AA       AVDSRT+LLKRYLKKSEENKEKNDKERL
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQKNKLNTPSTATAATA----GASQIGRRGLLLSAIAAAAATAPEDAVDSRTQLLKRYLKKSEENKEKNDKERL

Query:  ESYYKRNYKDYFEFVEGSLKNKSELSESEKGIIEWLKRNK
        ES+YKRNYKDYFEFVEGSLKNK ELSE+EKGIIEWLKRNK
Subjt:  ESYYKRNYKDYFEFVEGSLKNKSELSESEKGIIEWLKRNK

XP_038887440.1 uncharacterized protein LOC120077574 [Benincasa hispida]

8.8e-50

87.5

Show/hide

Query:  MSSIGQSILMALAVTLNKFASSNVQSVQKNKLNTPSTATAATAGASQIGRRGLLLSAIAAAAATAPEDAVDSRTQLLKRYLKKSEENKEKNDKERLESYY
        MSSIGQSILMALAVTLNKFASSNVQSVQ+N+ N P TATA T   S IGRRGLLLSA+AAAAAT PE+AVDSRT+LLKRYLKKSEENKEKNDKERLESYY
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQKNKLNTPSTATAATAGASQIGRRGLLLSAIAAAAATAPEDAVDSRTQLLKRYLKKSEENKEKNDKERLESYY

Query:  KRNYKDYFEFVEGSLKNKSELSESEKGIIEWLKRNK
        KRNYKDYFEFVEGS+KNK+ELSE+EKGIIEWLKRNK
Subjt:  KRNYKDYFEFVEGSLKNKSELSESEKGIIEWLKRNK

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C176 uncharacterized protein LOC103495319

3.9e-43

79.41

Show/hide

Query:  MSSIGQSILMALAVTLNKFASSNVQSVQKNKLNTPSTATAATAGASQIGRRGLLLSAIAAAAATAPEDAVDSRTQLLKRYLKKSEENKEKNDKERLESYY
        MSSIGQSILMALAVTLNKFASSNVQSVQ+NK    +TAT     +S IGRR LLLS +A A+  A   AVDSRT+LLKRYLKKSEENKEKNDKERLESYY
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQKNKLNTPSTATAATAGASQIGRRGLLLSAIAAAAATAPEDAVDSRTQLLKRYLKKSEENKEKNDKERLESYY

Query:  KRNYKDYFEFVEGSLKNKSELSESEKGIIEWLKRNK
        KRNYKDYFEFVEGS+KNK+ELSE+EKGI+EWLKRNK
Subjt:  KRNYKDYFEFVEGSLKNKSELSESEKGIIEWLKRNK

A0A2H5P8W1 Uncharacterized protein

1.1e-34

66.67

Show/hide

Query:  MSSIGQSILMALAVTLNKFASSNVQSVQKNKLNTPSTATA---ATAGASQIGRRGLLLSAIAAAAATAPEDAVDSRTQLLKRYLKKSEENKEKNDKERLE
        MSSIGQSILMAL VT+NK+AS NVQ+V + +  TP T  A   A A    IGRRGLLLS++ AA     +   DS+TQLL++YLKKSEENK KNDKER++
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQKNKLNTPSTATA---ATAGASQIGRRGLLLSAIAAAAATAPEDAVDSRTQLLKRYLKKSEENKEKNDKERLE

Query:  SYYKRNYKDYFEFVEGSLKNKS--ELSESEKGIIEWLKRNK
        SYYKRNYKDYF+F+EGSLK KS  ELSESEKGI+EWLK NK
Subjt:  SYYKRNYKDYFEFVEGSLKNKS--ELSESEKGIIEWLKRNK

A0A6J1D574 uncharacterized protein LOC111017388 isoform X1

2.3e-40

75.74

Show/hide

Query:  MSSIGQSILMALAVTLNKFASSNVQSVQKNKLNTPSTATAATAGASQIGRRGLLLSAIAAAAATAPEDAVDSRTQLLKRYLKKSEENKEKNDKERLESYY
        MSSIGQSILMALAVT+NKFASSNVQSV +N+        +A A AS IGRRGLL SA+AAA A      VDSRT+LLKRYLKKSE+NKEKNDKERL+SYY
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQKNKLNTPSTATAATAGASQIGRRGLLLSAIAAAAATAPEDAVDSRTQLLKRYLKKSEENKEKNDKERLESYY

Query:  KRNYKDYFEFVEGSLKNKSELSESEKGIIEWLKRNK
        KRNYKDYFEFVEGS++NKSELSE+EK IIEWL+RNK
Subjt:  KRNYKDYFEFVEGSLKNKSELSESEKGIIEWLKRNK

A0A6J1EM63 uncharacterized protein LOC111434615

5.0e-43

77.86

Show/hide

Query:  MSSIGQSILMALAVTLNKFASSNVQSVQKNKLNTPSTAT----AATAGASQIGRRGLLLSAIAAAAATAPEDAVDSRTQLLKRYLKKSEENKEKNDKERL
        MSSIGQ+ILMALA+TLN+FASSNVQSVQ+NK  TP T T    A+T+ +S I RRGLLLSA  AA       AVDSRT+LLKRYLKKSEENKEKNDKERL
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQKNKLNTPSTAT----AATAGASQIGRRGLLLSAIAAAAATAPEDAVDSRTQLLKRYLKKSEENKEKNDKERL

Query:  ESYYKRNYKDYFEFVEGSLKNKSELSESEKGIIEWLKRNK
        ES+YKRNYKDYFEFVEGSLKNK ELSE+EKGIIEWLKRNK
Subjt:  ESYYKRNYKDYFEFVEGSLKNKSELSESEKGIIEWLKRNK

A0A6J1JNZ7 uncharacterized protein LOC111486201

3.0e-43

80.15

Show/hide

Query:  MSSIGQSILMALAVTLNKFASSNVQSVQKNKLNTPSTATAATAGASQIGRRGLLLSAIAAAAATAPEDAVDSRTQLLKRYLKKSEENKEKNDKERLESYY
        MSSIGQ+ILMALA+TLN+FASSNVQSVQ+NK  TP T TA T+ +S I RRGLLLSA  AA       AVDSRT+LLKRYLKKSEENKEKNDKERLES+Y
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQKNKLNTPSTATAATAGASQIGRRGLLLSAIAAAAATAPEDAVDSRTQLLKRYLKKSEENKEKNDKERLESYY

Query:  KRNYKDYFEFVEGSLKNKSELSESEKGIIEWLKRNK
        KRNYKDYFEFVEGSLKNK ELSE+EKGIIEWLKRNK
Subjt:  KRNYKDYFEFVEGSLKNKSELSESEKGIIEWLKRNK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G49975.1 INVOLVED IN: photosynthesis; LOCATED IN: photosystem I, chloroplast, thylakoid membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit N (InterPro:IPR008796); Has 34 Blast hits to 34 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

5.2e-32

61.59

Show/hide

Query:  MSSIGQSILMALAVTLNKFASSNVQSVQKNKLNTPSTATAATAGASQIGRRGLLLSAIAAAAATAPEDAVDSRTQLLKRYLKKSEENKEKNDKERLESYY
        MSSI QSILMAL VT+NK+ASSNVQ+V++N     S     TA  + +GRR +L S+ +  AA     A+ S  QLL++YLKK+EENK KNDKERL+S+Y
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQKNKLNTPSTATAATAGASQIGRRGLLLSAIAAAAATAPEDAVDSRTQLLKRYLKKSEENKEKNDKERLESYY

Query:  KRNYKDYFEFVEGSLKNK--SELSESEKGIIEWLKRNK
        KRNYKDYFEFVEGS+K K  +ELSESEK I+EWLK NK
Subjt:  KRNYKDYFEFVEGSLKNK--SELSESEKGIIEWLKRNK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAGCTCCATCGGCCAAAGCATTCTGATGGCTCTCGCCGTCACTCTCAACAAATTCGCTTCCTCTAACGTTCAATCTGTTCAGAAAAACAAACTCAACACACCATCTAC
CGCCACCGCTGCCACCGCCGGCGCTTCTCAAATTGGAAGAAGAGGCCTCCTCTTGTCTGCCATCGCCGCCGCCGCCGCCACCGCTCCCGAAGACGCCGTCGACTCCAGAA
CCCAACTGCTAAAAAGATACCTAAAGAAGTCCGAAGAAAACAAAGAAAAGAATGACAAGGAGAGATTGGAGAGTTACTACAAGCGAAATTACAAAGATTATTTTGAATTT
GTTGAAGGATCTTTGAAGAATAAGAGTGAACTTTCAGAGTCTGAGAAAGGTATTATTGAGTGGCTTAAGCGAAACAAATGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSSIGQSILMALAVTLNKFASSNVQSVQKNKLNTPSTATAATAGASQIGRRGLLLSAIAAAAATAPEDAVDSRTQLLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEF
VEGSLKNKSELSESEKGIIEWLKRNK

Lag0014526 (gene) of Sponge gourd (AG-4) v1 genome