; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0014532 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014532
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr12:1833832..1837016
RNA-Seq ExpressionLag0014532
SyntenyLag0014532
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN68165.1 hypothetical protein VITISV_008538 [Vitis vinifera]1.0e-2733.66Show/hide
Query:  RGLFEREISSWLALVEKIKDVELLDD-QDTISWKLEKSGTFSAKSFFLSMTTVSPKLSQPITSLIWKHKSPKKVKVLLWSLAYRSLNTDEMLQRKFKDWA
        R L + EI    +L++ +  + L     D  SW L  SG F+ KSFFL+++ +S   S   T L+W  + P K+K  +W +A++ +NT++MLQ +    A
Subjt:  RGLFEREISSWLALVEKIKDVELLDD-QDTISWKLEKSGTFSAKSFFLSMTTVSPKLSQPITSLIWKHKSPKKVKVLLWSLAYRSLNTDEMLQRKFKDWA

Query:  ISPLACRLCIKAAESLDHLFLHCEFAGAAWNFVASLLGISFCLPKKIEDWLLEGLNAWNLNRKAKILATCVFRATIWILWRERNARTFEDKCGSFASFCD
        +SP  C LC++  E++DHLFLHC      W+ +  L  I +  P+ + D +    N +  +++  +L      A +W++WRERNAR FEDK  +  +  D
Subjt:  ISPLACRLCIKAAESLDHLFLHCEFAGAAWNFVASLLGISFCLPKKIEDWLLEGLNAWNLNRKAKILATCVFRATIWILWRERNARTFEDKCGSFASFCD

Query:  NV
         +
Subjt:  NV

ONI36148.1 hypothetical protein PRUPE_1G572100 [Prunus persica]3.5e-2837.82Show/hide
Query:  RGLFEREISSWLALVEKIKDVEL-LDDQDTISWKLEKSGTFSAKSFFLSMTTVSPKLSQPITSLIWKHKSPKKVKVLLWSLAYRSLNTDEMLQRKFKDWA
        R L ERE +  + L+E ++ + L    +D   W LE SG+F+ KSF   +       + P  SL+WK KSP KVKV +W +A   +NT +++QRK     
Subjt:  RGLFEREISSWLALVEKIKDVEL-LDDQDTISWKLEKSGTFSAKSFFLSMTTVSPKLSQPITSLIWKHKSPKKVKVLLWSLAYRSLNTDEMLQRKFKDWA

Query:  ISPLACRLCIKAAESLDHLFLHCEFAGAAWNFVASLLGISFCLPKKIEDWLLEGLNAWNLNRKAKILATCVFRATIWILWRERNARTFEDKCG
        +SP  C LC    ES+DHLFLHC F+ + W  +   +G  + +PK   D+L      W L +    L  C+  +  WI+W ERN R FED  G
Subjt:  ISPLACRLCIKAAESLDHLFLHCEFAGAAWNFVASLLGISFCLPKKIEDWLLEGLNAWNLNRKAKILATCVFRATIWILWRERNARTFEDKCG

RVW15141.1 putative ribonuclease H protein [Vitis vinifera]7.8e-2835.15Show/hide
Query:  RGLFEREISSWLALVEKIKDVELLDD-QDTISWKLEKSGTFSAKSFFLSMTTVSPKLSQPITSLIWKHKSPKKVKVLLWSLAYRSLNTDEMLQRKFKDWA
        R L + EI    +L++ +  + L     D  SW L  SG F+ KSFFL+++ +S   S   T L+W  + P K+K  +W +A++ +NT++MLQ +    A
Subjt:  RGLFEREISSWLALVEKIKDVELLDD-QDTISWKLEKSGTFSAKSFFLSMTTVSPKLSQPITSLIWKHKSPKKVKVLLWSLAYRSLNTDEMLQRKFKDWA

Query:  ISPLACRLCIKAAESLDHLFLHCEFAGAAWNFVASLLGISFCLPKKIEDWLLEGLNAWNLNRKAKILATCVFRATIWILWRERNARTFEDKCGSFASFCD
        +SP  C LC++  E+ DHLFLHC      W+ +  L  I +  P+ I D L    N +  +++  IL      A +W++WRERNAR FEDK  +  +  D
Subjt:  ISPLACRLCIKAAESLDHLFLHCEFAGAAWNFVASLLGISFCLPKKIEDWLLEGLNAWNLNRKAKILATCVFRATIWILWRERNARTFEDKCGSFASFCD

Query:  NV
         +
Subjt:  NV

RVW74148.1 putative ribonuclease H protein [Vitis vinifera]1.7e-2733.66Show/hide
Query:  RGLFEREISSWLALVEKIKDVELLDD-QDTISWKLEKSGTFSAKSFFLSMTTVSPKLSQPITSLIWKHKSPKKVKVLLWSLAYRSLNTDEMLQRKFKDWA
        R L + EI    +L++ +  + L     D  SW L  SG F+ KSFFL+++ +S   S   T L+W  + P K+K  +W +A++ +NT++MLQ +    A
Subjt:  RGLFEREISSWLALVEKIKDVELLDD-QDTISWKLEKSGTFSAKSFFLSMTTVSPKLSQPITSLIWKHKSPKKVKVLLWSLAYRSLNTDEMLQRKFKDWA

Query:  ISPLACRLCIKAAESLDHLFLHCEFAGAAWNFVASLLGISFCLPKKIEDWLLEGLNAWNLNRKAKILATCVFRATIWILWRERNARTFEDKCGSFASFCD
        +SP  C LC++  E++DHLFLHC      W+ +  L  I +  P+ + D +    N +  +++  +L      A +W++WRERNAR FEDK  +  +  D
Subjt:  ISPLACRLCIKAAESLDHLFLHCEFAGAAWNFVASLLGISFCLPKKIEDWLLEGLNAWNLNRKAKILATCVFRATIWILWRERNARTFEDKCGSFASFCD

Query:  NV
         +
Subjt:  NV

TYK31299.1 protein FAM91A1 [Cucumis melo var. makuwa]1.9e-2950.36Show/hide
Query:  QDTISWKLEKSGTFSAKSFFLSMTTVSPKLSQPITSLIWKHKSPKKVKVLLWSLAYRSLNTDEMLQRKFKDWAISPLACRLCIKAAESLDHLFLHCEFAG
        +D + WKLE SG FS K  F  MT  + K +    +LIWK K  KKVK  LWSLAYRSLN    LQRKF + ++SP  C LC+K AE+ DHLFLHC+FA 
Subjt:  QDTISWKLEKSGTFSAKSFFLSMTTVSPKLSQPITSLIWKHKSPKKVKVLLWSLAYRSLNTDEMLQRKFKDWAISPLACRLCIKAAESLDHLFLHCEFAG

Query:  AAWNFVASLLGISFCLPKKIEDWLLEGLNAWNLNRKA
          WN +  L  +  CLPKKI+D + +GL   +   KA
Subjt:  AAWNFVASLLGISFCLPKKIEDWLLEGLNAWNLNRKA

TrEMBL top hitse value%identityAlignment
A0A251RJG1 zf-RVT domain-containing protein1.7e-2837.82Show/hide
Query:  RGLFEREISSWLALVEKIKDVEL-LDDQDTISWKLEKSGTFSAKSFFLSMTTVSPKLSQPITSLIWKHKSPKKVKVLLWSLAYRSLNTDEMLQRKFKDWA
        R L ERE +  + L+E ++ + L    +D   W LE SG+F+ KSF   +       + P  SL+WK KSP KVKV +W +A   +NT +++QRK     
Subjt:  RGLFEREISSWLALVEKIKDVEL-LDDQDTISWKLEKSGTFSAKSFFLSMTTVSPKLSQPITSLIWKHKSPKKVKVLLWSLAYRSLNTDEMLQRKFKDWA

Query:  ISPLACRLCIKAAESLDHLFLHCEFAGAAWNFVASLLGISFCLPKKIEDWLLEGLNAWNLNRKAKILATCVFRATIWILWRERNARTFEDKCG
        +SP  C LC    ES+DHLFLHC F+ + W  +   +G  + +PK   D+L      W L +    L  C+  +  WI+W ERN R FED  G
Subjt:  ISPLACRLCIKAAESLDHLFLHCEFAGAAWNFVASLLGISFCLPKKIEDWLLEGLNAWNLNRKAKILATCVFRATIWILWRERNARTFEDKCG

A0A438BVX7 Putative ribonuclease H protein3.8e-2835.15Show/hide
Query:  RGLFEREISSWLALVEKIKDVELLDD-QDTISWKLEKSGTFSAKSFFLSMTTVSPKLSQPITSLIWKHKSPKKVKVLLWSLAYRSLNTDEMLQRKFKDWA
        R L + EI    +L++ +  + L     D  SW L  SG F+ KSFFL+++ +S   S   T L+W  + P K+K  +W +A++ +NT++MLQ +    A
Subjt:  RGLFEREISSWLALVEKIKDVELLDD-QDTISWKLEKSGTFSAKSFFLSMTTVSPKLSQPITSLIWKHKSPKKVKVLLWSLAYRSLNTDEMLQRKFKDWA

Query:  ISPLACRLCIKAAESLDHLFLHCEFAGAAWNFVASLLGISFCLPKKIEDWLLEGLNAWNLNRKAKILATCVFRATIWILWRERNARTFEDKCGSFASFCD
        +SP  C LC++  E+ DHLFLHC      W+ +  L  I +  P+ I D L    N +  +++  IL      A +W++WRERNAR FEDK  +  +  D
Subjt:  ISPLACRLCIKAAESLDHLFLHCEFAGAAWNFVASLLGISFCLPKKIEDWLLEGLNAWNLNRKAKILATCVFRATIWILWRERNARTFEDKCGSFASFCD

Query:  NV
         +
Subjt:  NV

A0A5D3E632 Protein FAM91A19.0e-3050.36Show/hide
Query:  QDTISWKLEKSGTFSAKSFFLSMTTVSPKLSQPITSLIWKHKSPKKVKVLLWSLAYRSLNTDEMLQRKFKDWAISPLACRLCIKAAESLDHLFLHCEFAG
        +D + WKLE SG FS K  F  MT  + K +    +LIWK K  KKVK  LWSLAYRSLN    LQRKF + ++SP  C LC+K AE+ DHLFLHC+FA 
Subjt:  QDTISWKLEKSGTFSAKSFFLSMTTVSPKLSQPITSLIWKHKSPKKVKVLLWSLAYRSLNTDEMLQRKFKDWAISPLACRLCIKAAESLDHLFLHCEFAG

Query:  AAWNFVASLLGISFCLPKKIEDWLLEGLNAWNLNRKA
          WN +  L  +  CLPKKI+D + +GL   +   KA
Subjt:  AAWNFVASLLGISFCLPKKIEDWLLEGLNAWNLNRKA

A5BPI6 Uncharacterized protein4.9e-2833.66Show/hide
Query:  RGLFEREISSWLALVEKIKDVELLDD-QDTISWKLEKSGTFSAKSFFLSMTTVSPKLSQPITSLIWKHKSPKKVKVLLWSLAYRSLNTDEMLQRKFKDWA
        R L + EI    +L++ +  + L     D  SW L  SG F+ KSFFL+++ +S   S   T L+W  + P K+K  +W +A++ +NT++MLQ +    A
Subjt:  RGLFEREISSWLALVEKIKDVELLDD-QDTISWKLEKSGTFSAKSFFLSMTTVSPKLSQPITSLIWKHKSPKKVKVLLWSLAYRSLNTDEMLQRKFKDWA

Query:  ISPLACRLCIKAAESLDHLFLHCEFAGAAWNFVASLLGISFCLPKKIEDWLLEGLNAWNLNRKAKILATCVFRATIWILWRERNARTFEDKCGSFASFCD
        +SP  C LC++  E++DHLFLHC      W+ +  L  I +  P+ + D +    N +  +++  +L      A +W++WRERNAR FEDK  +  +  D
Subjt:  ISPLACRLCIKAAESLDHLFLHCEFAGAAWNFVASLLGISFCLPKKIEDWLLEGLNAWNLNRKAKILATCVFRATIWILWRERNARTFEDKCGSFASFCD

Query:  NV
         +
Subjt:  NV

M5XJT6 zf-RVT domain-containing protein (Fragment)1.7e-2837.82Show/hide
Query:  RGLFEREISSWLALVEKIKDVEL-LDDQDTISWKLEKSGTFSAKSFFLSMTTVSPKLSQPITSLIWKHKSPKKVKVLLWSLAYRSLNTDEMLQRKFKDWA
        R L ERE +  + L+E ++ + L    +D   W LE SG+F+ KSF   +       + P  SL+WK KSP KVKV +W +A   +NT +++QRK     
Subjt:  RGLFEREISSWLALVEKIKDVEL-LDDQDTISWKLEKSGTFSAKSFFLSMTTVSPKLSQPITSLIWKHKSPKKVKVLLWSLAYRSLNTDEMLQRKFKDWA

Query:  ISPLACRLCIKAAESLDHLFLHCEFAGAAWNFVASLLGISFCLPKKIEDWLLEGLNAWNLNRKAKILATCVFRATIWILWRERNARTFEDKCG
        +SP  C LC    ES+DHLFLHC F+ + W  +   +G  + +PK   D+L      W L +    L  C+  +  WI+W ERN R FED  G
Subjt:  ISPLACRLCIKAAESLDHLFLHCEFAGAAWNFVASLLGISFCLPKKIEDWLLEGLNAWNLNRKAKILATCVFRATIWILWRERNARTFEDKCG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G60720.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.8e-0428.12Show/hide
Query:  QRKFKDWA-ISPLACRLCIKAAESLDHLFLHCEFAGAAWNFVASLL---GISFCLPKKIEDWLLEGLNAWNLNRKAKILATCVFRATIWILWRERN
        +++   W  I    C LC    ES DHL   CEFA   W    S L      FC   ++  W+    ++        +L      A I+ +WR+RN
Subjt:  QRKFKDWA-ISPLACRLCIKAAESLDHLFLHCEFAGAAWNFVASLL---GISFCLPKKIEDWLLEGLNAWNLNRKAKILATCVFRATIWILWRERN

AT2G02520.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.5e-0529.37Show/hide
Query:  IW-KHKSPKKVKVLLWSLAYRSLNTDEMLQRKFKDWAISPLACRLCIKAAESLDHLFLHCEFAGAAWNFVASLLGISFCLPKKIED---WLLEGLNAWNL
        IW K K PK   +   ++ +R    D M+   F    I P  C  C    E+  HLF  CEFA   W +  S + +    P   ED   WL       N+
Subjt:  IW-KHKSPKKVKVLLWSLAYRSLNTDEMLQRKFKDWAISPLACRLCIKAAESLDHLFLHCEFAGAAWNFVASLLGISFCLPKKIED---WLLEGLNAWNL

Query:  NRKAKILATCVFRATIWILWRERNAR
            ++       A+++ +W+ERNAR
Subjt:  NRKAKILATCVFRATIWILWRERNAR

AT3G25270.1 Ribonuclease H-like superfamily protein1.4e-0627.03Show/hide
Query:  VSPKLSQP-----ITSLIWKHKSPKKVKVLLWSLAYRSLNTDEMLQRKFKDWAISPLACRLCIKAAESLDHLFLHCEFAGAAWNFVA----SLLGISFCL
        + P++  P     I + IWK K+  K+K  LW L   +L T + L+R+      +   C  C +  E+  HLF  C +A   W         L      +
Subjt:  VSPKLSQP-----ITSLIWKHKSPKKVKVLLWSLAYRSLNTDEMLQRKFKDWAISPLACRLCIKAAESLDHLFLHCEFAGAAWNFVA----SLLGISFCL

Query:  PKKIEDWLLEGLNAWNLNRKAKILATCVFRATIWILWRERNARTFEDK
          K+E  LL  L++   NR+ ++    ++   +W LW+ RN   F+ K
Subjt:  PKKIEDWLLEGLNAWNLNRKAKILATCVFRATIWILWRERNARTFEDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTATGCACAAAAACACCAGCCCGCGGGAGAGACAGAACTACTCGAGTTGGAAGAACTTACCGGAACATGAGGCTACTTGGATGCTGCTATCTGATTTGCACCAACA
ATACCCAAACTTCCACCTTGAGGAGGCGGTGATAAGAGGCCTCTTTGAAAGAGAGATTAGTAGCTGGTTGGCCTTGGTGGAGAAAATCAAAGATGTTGAGCTGTTAGATG
ATCAAGACACCATCAGCTGGAAGTTGGAAAAATCTGGAACCTTTTCTGCAAAATCATTCTTCCTGTCTATGACTACGGTCTCTCCTAAATTAAGCCAGCCCATTACTAGT
CTTATTTGGAAGCATAAAAGCCCAAAGAAGGTGAAAGTGCTTCTTTGGTCCCTTGCATACAGAAGTTTAAATACTGATGAGATGTTGCAAAGAAAGTTTAAAGACTGGGC
GATCTCTCCTTTGGCTTGTAGGCTTTGTATTAAGGCAGCAGAATCTTTAGATCATTTGTTCCTCCATTGTGAGTTTGCAGGGGCTGCCTGGAATTTTGTGGCCAGTTTGC
TCGGCATTTCATTCTGTTTGCCAAAGAAGATTGAGGACTGGTTGTTAGAAGGGCTAAATGCTTGGAATCTAAATAGGAAGGCTAAGATCTTGGCTACTTGTGTGTTTCGG
GCCACTATTTGGATTTTGTGGAGGGAGAGAAATGCTAGAACTTTTGAGGATAAGTGTGGCAGCTTTGCTTCTTTTTGTGATAATGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTATGCACAAAAACACCAGCCCGCGGGAGAGACAGAACTACTCGAGTTGGAAGAACTTACCGGAACATGAGGCTACTTGGATGCTGCTATCTGATTTGCACCAACA
ATACCCAAACTTCCACCTTGAGGAGGCGGTGATAAGAGGCCTCTTTGAAAGAGAGATTAGTAGCTGGTTGGCCTTGGTGGAGAAAATCAAAGATGTTGAGCTGTTAGATG
ATCAAGACACCATCAGCTGGAAGTTGGAAAAATCTGGAACCTTTTCTGCAAAATCATTCTTCCTGTCTATGACTACGGTCTCTCCTAAATTAAGCCAGCCCATTACTAGT
CTTATTTGGAAGCATAAAAGCCCAAAGAAGGTGAAAGTGCTTCTTTGGTCCCTTGCATACAGAAGTTTAAATACTGATGAGATGTTGCAAAGAAAGTTTAAAGACTGGGC
GATCTCTCCTTTGGCTTGTAGGCTTTGTATTAAGGCAGCAGAATCTTTAGATCATTTGTTCCTCCATTGTGAGTTTGCAGGGGCTGCCTGGAATTTTGTGGCCAGTTTGC
TCGGCATTTCATTCTGTTTGCCAAAGAAGATTGAGGACTGGTTGTTAGAAGGGCTAAATGCTTGGAATCTAAATAGGAAGGCTAAGATCTTGGCTACTTGTGTGTTTCGG
GCCACTATTTGGATTTTGTGGAGGGAGAGAAATGCTAGAACTTTTGAGGATAAGTGTGGCAGCTTTGCTTCTTTTTGTGATAATGTATAA
Protein sequenceShow/hide protein sequence
MSMHKNTSPRERQNYSSWKNLPEHEATWMLLSDLHQQYPNFHLEEAVIRGLFEREISSWLALVEKIKDVELLDDQDTISWKLEKSGTFSAKSFFLSMTTVSPKLSQPITS
LIWKHKSPKKVKVLLWSLAYRSLNTDEMLQRKFKDWAISPLACRLCIKAAESLDHLFLHCEFAGAAWNFVASLLGISFCLPKKIEDWLLEGLNAWNLNRKAKILATCVFR
ATIWILWRERNARTFEDKCGSFASFCDNV