; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0014565 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014565
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPUM-HD domain-containing protein
Genome locationchr12:2130990..2134024
RNA-Seq ExpressionLag0014565
SyntenyLag0014565
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001313 - Pumilio RNA-binding repeat
IPR011989 - Armadillo-like helical
IPR016024 - Armadillo-type fold
IPR033133 - Pumilio homology domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645845.1 hypothetical protein Csa_017253 [Cucumis sativus]4.8e-7058.97Show/hide
Query:  HQAVVKLMDRLKWPYQQSTIALAISDHAFTLAKSFNGGHVVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYA---IGEVQEAFVSPL
        H+ VV L+  LK+P QQ  I L +  H  TLAK F+ GH V+K CF NF  Q+NELI+LR+AQ+CLEL+R QA CCILQ CIEY+   + ++QE  +SPL
Subjt:  HQAVVKLMDRLKWPYQQSTIALAISDHAFTLAKSFNGGHVVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYA---IGEVQEAFVSPL

Query:  IQDAENLSRHVYGNYVIQFMIQLDGATIGTRIIKELRNKFVGLSLDKYGSNVVERCLSCCESGVNQIIFEIMEND--ETRVRVCTNEYGNYVVQRAISVA
        IQD  +LS+H YGNYVIQFMIQLDG  IG RIIKEL +KFV LS+DKYGSNVVE+CLSCCE   N IIFEI+E +  +  +++CTN+YGN+VVQ  +S+A
Subjt:  IQDAENLSRHVYGNYVIQFMIQLDGATIGTRIIKELRNKFVGLSLDKYGSNVVERCLSCCESGVNQIIFEIMEND--ETRVRVCTNEYGNYVVQRAISVA

Query:  KGETYSLLIRAIKNHRLDLIFHPYGKNVIGATKR
        KG+   LL +AIK+H L L  H YG+NVI + +R
Subjt:  KGETYSLLIRAIKNHRLDLIFHPYGKNVIGATKR

KAF8406236.1 hypothetical protein HHK36_008321 [Tetracentron sinense]5.0e-5135.31Show/hide
Query:  EGGNLSETRMIIEVIKDQLHEIMVDRAGNCFVQSLLEFCHENFIDHLLLSLIRKEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDHAFTLAK
        E GN  E  MI   +KD + E+M+D+ GN FVQ LL+ C+E     +L+S+      F+++CLD  G +AV KL++RL  P Q   + LA+S +  +L K
Subjt:  EGGNLSETRMIIEVIKDQLHEIMVDRAGNCFVQSLLEFCHENFIDHLLLSLIRKEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDHAFTLAK

Query:  SFNGGHVVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYAIGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGTRIIKEL
          NG HV+ ++C   F  + N+ +L  +A +C+E+++D++GCC+L+ C++++ GE++E F++ + ++A  L+   +GNYV+Q++++L    +   ++++L
Subjt:  SFNGGHVVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYAIGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGTRIIKEL

Query:  RNKFVGLSLDKYGSNVVERCLSCC-ESGVNQIIFEIMENDETRVRVCTNEYGNYVVQRAISVAKGETYSLLIRAIKNHRLDLIFHPYGKNVIGATKRIRS
          ++  LS+DKYGSNVVE C+    E    +II E++ N      +  + +GNYV+QRA+  +KG  Y+ L+  I  H   L  HPYG+ V+      + 
Subjt:  RNKFVGLSLDKYGSNVVERCLSCC-ESGVNQIIFEIMENDETRVRVCTNEYGNYVVQRAISVAKGETYSLLIRAIKNHRLDLIFHPYGKNVIGATKRIRS

Query:  PNH
          H
Subjt:  PNH

PIA33038.1 hypothetical protein AQUCO_04200053v1 [Aquilegia coerulea]1.1e-5035.1Show/hide
Query:  IEGGNLSETRMIIEVIKDQLHEIMVDRAGNCFVQSLLEFCHENFIDHLLLSLIRKEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDHAFTLA
        IEGG   +  MI+  IKD + E+MVD+ GN  VQ LL+ C+      +L+S+ R E     +C D  G +AV KL++RL   +QQ+    A++   F+L 
Subjt:  IEGGNLSETRMIIEVIKDQLHEIMVDRAGNCFVQSLLEFCHENFIDHLLLSLIRKEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDHAFTLA

Query:  KSFNGGHVVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYAIGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGTRIIKE
           NG HV+ ++C  NFP +    +L  +A  CL++++D++GCC+LQ+C+E++ GE +E  V+ + ++A +LS+H YGNYV+QF++ ++     ++++++
Subjt:  KSFNGGHVVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYAIGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGTRIIKE

Query:  LRNKFVGLSLDKYGSNVVERCL-SCCESGVNQIIFEIMENDETRVRVCTNEYGNYVVQRAI---SVAKGETYSLLIRAIKNHRLDLIFHPYGKNVIGATK
        L   ++ LS+ KY SNVVERCL    E    QI+ E++ N    +++  + YGNYV+Q A+   +  K   +  ++  +K     L  HPYGK ++   +
Subjt:  LRNKFVGLSLDKYGSNVVERCL-SCCESGVNQIIFEIMENDETRVRVCTNEYGNYVVQRAI---SVAKGETYSLLIRAIKNHRLDLIFHPYGKNVIGATK

Query:  RI
        ++
Subjt:  RI

XP_008455521.1 PREDICTED: putative pumilio homolog 8, chloroplastic [Cucumis melo]1.4e-5653.07Show/hide
Query:  NLSETRMIIEVIKD----QLHEIMVDRAGNCFVQSLLE--FCHENFIDHLLLSLIR-KEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDHAF
        ++++ R +  V++      LH +++   GN F+  LL+   CH  FI+HLLLSL     + F+ + L  LG++ VV L+  LK+P QQ  IAL +S H  
Subjt:  NLSETRMIIEVIKD----QLHEIMVDRAGNCFVQSLLE--FCHENFIDHLLLSLIR-KEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDHAF

Query:  TLAKSFNGGHVVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYA---IGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIG
        TLAK F GGH V+K CF +F  Q NELILLR+AQ+CLEL+R+QAGCCILQ CIEY+     +++E  ++PLI+DA +LS+H YGNYVIQFMIQLDG  IG
Subjt:  TLAKSFNGGHVVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYA---IGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIG

Query:  TRIIKELRNKFVGLSLDKYGSNVVERCL
         R+IKEL +KFV LS+DKYGSNVVE+C+
Subjt:  TRIIKELRNKFVGLSLDKYGSNVVERCL

XP_022148742.1 pumilio homolog 12-like [Momordica charantia]8.8e-8849.87Show/hide
Query:  IDRNDRDSNRYSINNGHTDARGSNFFQRHIENGA-RNVHGQRSSFRSSAAGIGAVGPRNGR-HGRGMGSREIMNELDFKAIMLRLIEGGNLSETRMIIEV
        +D  D     Y ++N H D+   NFFQ  + NG   N     S    S AG   + P NG  +G G G R +  + +   ++ R+IE G+L ET  I+E 
Subjt:  IDRNDRDSNRYSINNGHTDARGSNFFQRHIENGA-RNVHGQRSSFRSSAAGIGAVGPRNGR-HGRGMGSREIMNELDFKAIMLRLIEGGNLSETRMIIEV

Query:  IKDQLHEIMVDRAGNCFVQSLLEFCHENFIDHLLLSLIRKEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDHAFTLAKSFNGGHVVLKHCFL
        +KD +HE+M+   GN  VQ+L  FCHE FI  LLLSLI K++ F+ VCL +LG +AVVKL+ RL  P  Q   A+ IS H   LAKS   GH VL +CF 
Subjt:  IKDQLHEIMVDRAGNCFVQSLLEFCHENFIDHLLLSLIRKEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDHAFTLAKSFNGGHVVLKHCFL

Query:  NFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYAIGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGTRIIKELRNKFVGLSLDKYGS
        N  RQ NE+ILL +A + LEL++D+ GCCIL  CI YA G ++   V+PLIQ+A +LS H Y N+VIQF+I+LD A IG R+I+ LRNKFV L L K GS
Subjt:  NFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYAIGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGTRIIKELRNKFVGLSLDKYGS

Query:  NVVERCLSCCESGVNQIIFEIMENDETRVRVCTNEYGNYVVQRAISVAKGETYSLLIRAIKNHRLDLIFHPYGKNVIGA
        +VVE+CL C E     IIFEIMEN E  ++V TN+YGNYV Q+A+SVAKGE Y+LL+RAIK+ +  L FHPYG++V+ A
Subjt:  NVVERCLSCCESGVNQIIFEIMENDETRVRVCTNEYGNYVVQRAISVAKGETYSLLIRAIKNHRLDLIFHPYGKNVIGA

TrEMBL top hitse value%identityAlignment
A0A0A0K7S4 PUM-HD domain-containing protein4.0e-5461.11Show/hide
Query:  ELILLRMAQSCLELSRDQAGCCILQVCIEYA---IGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGTRIIKELRNKFVGLSLDKYGSNVVE
        +LI+LR+AQ+CLEL+R QA CCILQ CIEY+   + ++QE  +SPLIQD  +LS+H YGNYVIQFMIQLDG  IG RIIKEL +KFV LS+DKYGSNVVE
Subjt:  ELILLRMAQSCLELSRDQAGCCILQVCIEYA---IGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGTRIIKELRNKFVGLSLDKYGSNVVE

Query:  RCLSCCESGVNQIIFEIMEND--ETRVRVCTNEYGNYVVQRAISVAKGETYSLLIRAIKNHRLDLIFHPYGKNVIGATKR
        +CLSCCE   N IIFEI+E +  +  +++CTN+YGN+VVQ  +S+AKG+   LL +AIK+H L L  H YG+NVI + +R
Subjt:  RCLSCCESGVNQIIFEIMEND--ETRVRVCTNEYGNYVVQRAISVAKGETYSLLIRAIKNHRLDLIFHPYGKNVIGATKR

A0A1S3C139 putative pumilio homolog 8, chloroplastic6.6e-5753.07Show/hide
Query:  NLSETRMIIEVIKD----QLHEIMVDRAGNCFVQSLLE--FCHENFIDHLLLSLIR-KEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDHAF
        ++++ R +  V++      LH +++   GN F+  LL+   CH  FI+HLLLSL     + F+ + L  LG++ VV L+  LK+P QQ  IAL +S H  
Subjt:  NLSETRMIIEVIKD----QLHEIMVDRAGNCFVQSLLE--FCHENFIDHLLLSLIR-KEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDHAF

Query:  TLAKSFNGGHVVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYA---IGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIG
        TLAK F GGH V+K CF +F  Q NELILLR+AQ+CLEL+R+QAGCCILQ CIEY+     +++E  ++PLI+DA +LS+H YGNYVIQFMIQLDG  IG
Subjt:  TLAKSFNGGHVVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYA---IGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIG

Query:  TRIIKELRNKFVGLSLDKYGSNVVERCL
         R+IKEL +KFV LS+DKYGSNVVE+C+
Subjt:  TRIIKELRNKFVGLSLDKYGSNVVERCL

A0A2G5CP51 PUM-HD domain-containing protein5.4e-5135.1Show/hide
Query:  IEGGNLSETRMIIEVIKDQLHEIMVDRAGNCFVQSLLEFCHENFIDHLLLSLIRKEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDHAFTLA
        IEGG   +  MI+  IKD + E+MVD+ GN  VQ LL+ C+      +L+S+ R E     +C D  G +AV KL++RL   +QQ+    A++   F+L 
Subjt:  IEGGNLSETRMIIEVIKDQLHEIMVDRAGNCFVQSLLEFCHENFIDHLLLSLIRKEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDHAFTLA

Query:  KSFNGGHVVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYAIGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGTRIIKE
           NG HV+ ++C  NFP +    +L  +A  CL++++D++GCC+LQ+C+E++ GE +E  V+ + ++A +LS+H YGNYV+QF++ ++     ++++++
Subjt:  KSFNGGHVVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYAIGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGTRIIKE

Query:  LRNKFVGLSLDKYGSNVVERCL-SCCESGVNQIIFEIMENDETRVRVCTNEYGNYVVQRAI---SVAKGETYSLLIRAIKNHRLDLIFHPYGKNVIGATK
        L   ++ LS+ KY SNVVERCL    E    QI+ E++ N    +++  + YGNYV+Q A+   +  K   +  ++  +K     L  HPYGK ++   +
Subjt:  LRNKFVGLSLDKYGSNVVERCL-SCCESGVNQIIFEIMENDETRVRVCTNEYGNYVVQRAI---SVAKGETYSLLIRAIKNHRLDLIFHPYGKNVIGATK

Query:  RI
        ++
Subjt:  RI

A0A6J1D5W5 pumilio homolog 12-like4.3e-8849.87Show/hide
Query:  IDRNDRDSNRYSINNGHTDARGSNFFQRHIENGA-RNVHGQRSSFRSSAAGIGAVGPRNGR-HGRGMGSREIMNELDFKAIMLRLIEGGNLSETRMIIEV
        +D  D     Y ++N H D+   NFFQ  + NG   N     S    S AG   + P NG  +G G G R +  + +   ++ R+IE G+L ET  I+E 
Subjt:  IDRNDRDSNRYSINNGHTDARGSNFFQRHIENGA-RNVHGQRSSFRSSAAGIGAVGPRNGR-HGRGMGSREIMNELDFKAIMLRLIEGGNLSETRMIIEV

Query:  IKDQLHEIMVDRAGNCFVQSLLEFCHENFIDHLLLSLIRKEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDHAFTLAKSFNGGHVVLKHCFL
        +KD +HE+M+   GN  VQ+L  FCHE FI  LLLSLI K++ F+ VCL +LG +AVVKL+ RL  P  Q   A+ IS H   LAKS   GH VL +CF 
Subjt:  IKDQLHEIMVDRAGNCFVQSLLEFCHENFIDHLLLSLIRKEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDHAFTLAKSFNGGHVVLKHCFL

Query:  NFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYAIGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGTRIIKELRNKFVGLSLDKYGS
        N  RQ NE+ILL +A + LEL++D+ GCCIL  CI YA G ++   V+PLIQ+A +LS H Y N+VIQF+I+LD A IG R+I+ LRNKFV L L K GS
Subjt:  NFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYAIGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGTRIIKELRNKFVGLSLDKYGS

Query:  NVVERCLSCCESGVNQIIFEIMENDETRVRVCTNEYGNYVVQRAISVAKGETYSLLIRAIKNHRLDLIFHPYGKNVIGA
        +VVE+CL C E     IIFEIMEN E  ++V TN+YGNYV Q+A+SVAKGE Y+LL+RAIK+ +  L FHPYG++V+ A
Subjt:  NVVERCLSCCESGVNQIIFEIMENDETRVRVCTNEYGNYVVQRAISVAKGETYSLLIRAIKNHRLDLIFHPYGKNVIGA

A0A6P3YS61 pumilio homolog 12-like5.1e-4940.27Show/hide
Query:  ETRMIIEVIKDQLHEIMVDRAGNCFVQSLLEFCHENFIDHLLLSLIRKEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDHAFTLAKSFNGGH
        E  MI   +KD LH++MV + GN  +Q L+E  + N +  +L+S+I  E+ F  VC+D  G + V KL+  LK P QQ     A+S     L KS NG H
Subjt:  ETRMIIEVIKDQLHEIMVDRAGNCFVQSLLEFCHENFIDHLLLSLIRKEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDHAFTLAKSFNGGH

Query:  VVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYA--------IGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGT--RI
        V+ K CF     + N+ +L  +A +CLE++ D++GCCILQ C+ YA         GE ++  ++ +I +A+ LS H YGNYV+Q +I       GT   I
Subjt:  VVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYA--------IGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGT--RI

Query:  IKELRNKFVGLSLDKYGSNVVERCLSCCESGVNQ---IIFEIMENDETRVRVCTNEYGNYVVQRAISVAKGETYSLLIRAIKNHRLDLIFHPYGKNVI
        + +LR K+V LS++K+GSNVVE+CL   ES   Q   II + + N    + V  + YGNYV Q A+ V+ G T+S L+R I  H   L  HP+GK V+
Subjt:  IKELRNKFVGLSLDKYGSNVVERCLSCCESGVNQ---IIFEIMENDETRVRVCTNEYGNYVVQRAISVAKGETYSLLIRAIKNHRLDLIFHPYGKNVI

SwissProt top hitse value%identityAlignment
Q1PFN9 Pumilio homolog 92.7e-3127.15Show/hide
Query:  IMLRLIEGGNLSETRMIIEVIKDQLHEIMVDRAGNCFVQSLLEFCHENFIDHLLLSLIRKEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDH
        ++ +L+E G   E ++I+  I D + E+ +D  GN  VQ L +   E     ++  L       + +CL+  G + V K+++ +K   Q + +   +   
Subjt:  IMLRLIEGGNLSETRMIIEVIKDQLHEIMVDRAGNCFVQSLLEFCHENFIDHLLLSLIRKEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDH

Query:  AFTLAKSFNGGHVVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYAIGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGT
           L K  NG HV+ + C        NE +L    + C E++  + GCC+LQ CI  ++G  +E  V+ + +++ +LS+  +GNYV+Q++I  D      
Subjt:  AFTLAKSFNGGHVVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYAIGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGT

Query:  RIIKELRNKFVGLSLDKYGSNVVERCLSCCESGVNQIIFEIM--ENDETRVRVCTNEYGNYVVQRAISVAKGETYSLLIRAIKNHRLDLIFHPYGKNVIG
        +++ + R  +  L+  K+ S+V+E+CL        +I+ E++   N E  ++   + Y NYV+Q A+SV KG   + L+  +  +   L   PY K +  
Subjt:  RIIKELRNKFVGLSLDKYGSNVVERCLSCCESGVNQIIFEIM--ENDETRVRVCTNEYGNYVVQRAISVAKGETYSLLIRAIKNHRLDLIFHPYGKNVIG

Query:  AT
         T
Subjt:  AT

Q9C9R6 Putative pumilio homolog 7, chloroplastic2.4e-3226.96Show/hide
Query:  RLIEGGNLSETRMIIEVIKDQLHEIMVDRAGNCFVQSLLEFCHENFIDHLLLSLIRKEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDHAFT
        R+ + G   +  +I   +   + E+M+D  GN  +Q LL+ C E     ++L    +    + + L+  G + V +L++ ++   Q S + LA+      
Subjt:  RLIEGGNLSETRMIIEVIKDQLHEIMVDRAGNCFVQSLLEFCHENFIDHLLLSLIRKEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDHAFT

Query:  LAKSFNGGHVVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYAIGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGTRII
        L K  NG HV+ + C      + N+ I     + C E++  + GCC+LQ CI Y++ + +E  ++ + +++  L++  +GNY +QF+I+L   +    ++
Subjt:  LAKSFNGGHVVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYAIGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGTRII

Query:  KELRNKFVGLSLDKYGSNVVERCLSCCESGVNQIIFEIMENDETRVRVCTNEYGNYVVQRAISVAKGETYSLLIRAIKNHRLDLIFHPYGKNV
         +L+  +V LS+ K+ S++VERCL  C     QI+ E++       ++  + Y N+V+Q A++  KG  ++ L+  I+ H + L  +PY K +
Subjt:  KELRNKFVGLSLDKYGSNVVERCLSCCESGVNQIIFEIMENDETRVRVCTNEYGNYVVQRAISVAKGETYSLLIRAIKNHRLDLIFHPYGKNV

Q9LDW3 Pumilio homolog 113.1e-3528.72Show/hide
Query:  IMLRLIEGGNLSETRMIIEVIKDQLHEIMVDRAGNCFVQSLLEFCHENFIDHLLLSLIRKEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDH
        ++ + ++ GN  +  +I + + + + E+  D  GN  +Q L+E C+E     +L+ L  K    V + ++N G + V KL++ +    Q S +  A+   
Subjt:  IMLRLIEGGNLSETRMIIEVIKDQLHEIMVDRAGNCFVQSLLEFCHENFIDHLLLSLIRKEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDH

Query:  AFTLAKSFNGGHVVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYAIGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGT
          +L +  NG HV+L +C   F    N+ IL    + C+E++  + GCC+LQ C+ Y++GE  E  V  + +++  L++  +GNY++Q++I+      G 
Subjt:  AFTLAKSFNGGHVVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYAIGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGT

Query:  RIIKELRNKFVGLSLDKYGSNVVERCLSCCESGVNQIIFEIMENDETRVRVCTNEYGNYVVQRAISVAKGETYSLLIRAIKNHRLDLIFHPYGKNV
         ++ ELR  +V L+  K+GS+VVE+CL       +QI+ E++        +  + Y NYV+Q A+S  KG   + L+  ++ +  +L   PY K +
Subjt:  RIIKELRNKFVGLSLDKYGSNVVERCLSCCESGVNQIIFEIMENDETRVRVCTNEYGNYVVQRAISVAKGETYSLLIRAIKNHRLDLIFHPYGKNV

Q9LM20 Putative pumilio homolog 8, chloroplastic6.9e-3527.74Show/hide
Query:  LIEGGNLSETRMIIEVIKDQLHEIMVDRAGNCFVQSLLEFCHENFIDHLLLSLIRKEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDHAFTL
        + E G+  +  +I   +   + E+M+D  GN  +Q LL+ C+E     ++L +  +    + + L+  G + V +L++ +K   Q S +  A+      L
Subjt:  LIEGGNLSETRMIIEVIKDQLHEIMVDRAGNCFVQSLLEFCHENFIDHLLLSLIRKEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDHAFTL

Query:  AKSFNGGHVVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYAIGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGTRIIK
         +  NG HV+ + C      + NE I     + C++++  + GCC+LQ CI Y+ G  +E  V+ + +++  L++  YGNY +QF+++L   +    ++ 
Subjt:  AKSFNGGHVVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYAIGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGTRIIK

Query:  ELRNKFVGLSLDKYGSNVVERCLSCCESGVNQIIFEIMENDETRVRVCTNEYGNYVVQRAISVAKGETYSLLIRAIKNHRLDLIFHPYGKNV
        +L+  +V LS+ K+ S++VERCL+ C     QI+ E++      + +  + Y N+V+Q A++V KG  ++ L+  I+ H + L  +PY K +
Subjt:  ELRNKFVGLSLDKYGSNVVERCLSCCESGVNQIIFEIMENDETRVRVCTNEYGNYVVQRAISVAKGETYSLLIRAIKNHRLDLIFHPYGKNV

Q9LVC3 Pumilio homolog 123.5e-3933.33Show/hide
Query:  SETRMIIEVIKDQLHEIMVDRAGNCFVQSLLEFCHENFIDHLLLSLIRKEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDHAFTLAKSFNGG
        ++  MI   I D + E+M+D  GN  VQ LLE C+E+    ++ S+ RK    + +  D  G +AV K+++  K   + S I  A+      L K+ NG 
Subjt:  SETRMIIEVIKDQLHEIMVDRAGNCFVQSLLEFCHENFIDHLLLSLIRKEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDHAFTLAKSFNGG

Query:  HVVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYAIGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGTRIIKELRNKFV
        HVV + C         + +       C+EL+ D+ GCC+LQ C+ Y+ GE ++  VS +  +A  LS+  +GNYV+Q++ +L        I+++L   + 
Subjt:  HVVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYAIGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGTRIIKELRNKFV

Query:  GLSLDKYGSNVVERCLSCCESGVNQIIFEIMENDETRVRVCTNEYGNYVVQRAISVAKGETYSLLIRAIKNHRLDLIFHPYGKNVIGA
         LS+ K  SNVVE+CL   +      I   + N     +V  + YGNYV+Q A+  +KG  ++LL+ AIK +   L  +PYGK V+ A
Subjt:  GLSLDKYGSNVVERCLSCCESGVNQIIFEIMENDETRVRVCTNEYGNYVVQRAISVAKGETYSLLIRAIKNHRLDLIFHPYGKNVIGA

Arabidopsis top hitse value%identityAlignment
AT1G22240.1 pumilio 84.9e-3627.74Show/hide
Query:  LIEGGNLSETRMIIEVIKDQLHEIMVDRAGNCFVQSLLEFCHENFIDHLLLSLIRKEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDHAFTL
        + E G+  +  +I   +   + E+M+D  GN  +Q LL+ C+E     ++L +  +    + + L+  G + V +L++ +K   Q S +  A+      L
Subjt:  LIEGGNLSETRMIIEVIKDQLHEIMVDRAGNCFVQSLLEFCHENFIDHLLLSLIRKEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDHAFTL

Query:  AKSFNGGHVVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYAIGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGTRIIK
         +  NG HV+ + C      + NE I     + C++++  + GCC+LQ CI Y+ G  +E  V+ + +++  L++  YGNY +QF+++L   +    ++ 
Subjt:  AKSFNGGHVVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYAIGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGTRIIK

Query:  ELRNKFVGLSLDKYGSNVVERCLSCCESGVNQIIFEIMENDETRVRVCTNEYGNYVVQRAISVAKGETYSLLIRAIKNHRLDLIFHPYGKNV
        +L+  +V LS+ K+ S++VERCL+ C     QI+ E++      + +  + Y N+V+Q A++V KG  ++ L+  I+ H + L  +PY K +
Subjt:  ELRNKFVGLSLDKYGSNVVERCLSCCESGVNQIIFEIMENDETRVRVCTNEYGNYVVQRAISVAKGETYSLLIRAIKNHRLDLIFHPYGKNV

AT1G35730.1 pumilio 91.9e-3227.15Show/hide
Query:  IMLRLIEGGNLSETRMIIEVIKDQLHEIMVDRAGNCFVQSLLEFCHENFIDHLLLSLIRKEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDH
        ++ +L+E G   E ++I+  I D + E+ +D  GN  VQ L +   E     ++  L       + +CL+  G + V K+++ +K   Q + +   +   
Subjt:  IMLRLIEGGNLSETRMIIEVIKDQLHEIMVDRAGNCFVQSLLEFCHENFIDHLLLSLIRKEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDH

Query:  AFTLAKSFNGGHVVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYAIGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGT
           L K  NG HV+ + C        NE +L    + C E++  + GCC+LQ CI  ++G  +E  V+ + +++ +LS+  +GNYV+Q++I  D      
Subjt:  AFTLAKSFNGGHVVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYAIGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGT

Query:  RIIKELRNKFVGLSLDKYGSNVVERCLSCCESGVNQIIFEIM--ENDETRVRVCTNEYGNYVVQRAISVAKGETYSLLIRAIKNHRLDLIFHPYGKNVIG
        +++ + R  +  L+  K+ S+V+E+CL        +I+ E++   N E  ++   + Y NYV+Q A+SV KG   + L+  +  +   L   PY K +  
Subjt:  RIIKELRNKFVGLSLDKYGSNVVERCLSCCESGVNQIIFEIM--ENDETRVRVCTNEYGNYVVQRAISVAKGETYSLLIRAIKNHRLDLIFHPYGKNVIG

Query:  AT
         T
Subjt:  AT

AT1G78160.1 pumilio 71.7e-3326.96Show/hide
Query:  RLIEGGNLSETRMIIEVIKDQLHEIMVDRAGNCFVQSLLEFCHENFIDHLLLSLIRKEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDHAFT
        R+ + G   +  +I   +   + E+M+D  GN  +Q LL+ C E     ++L    +    + + L+  G + V +L++ ++   Q S + LA+      
Subjt:  RLIEGGNLSETRMIIEVIKDQLHEIMVDRAGNCFVQSLLEFCHENFIDHLLLSLIRKEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDHAFT

Query:  LAKSFNGGHVVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYAIGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGTRII
        L K  NG HV+ + C      + N+ I     + C E++  + GCC+LQ CI Y++ + +E  ++ + +++  L++  +GNY +QF+I+L   +    ++
Subjt:  LAKSFNGGHVVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYAIGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGTRII

Query:  KELRNKFVGLSLDKYGSNVVERCLSCCESGVNQIIFEIMENDETRVRVCTNEYGNYVVQRAISVAKGETYSLLIRAIKNHRLDLIFHPYGKNV
         +L+  +V LS+ K+ S++VERCL  C     QI+ E++       ++  + Y N+V+Q A++  KG  ++ L+  I+ H + L  +PY K +
Subjt:  KELRNKFVGLSLDKYGSNVVERCLSCCESGVNQIIFEIMENDETRVRVCTNEYGNYVVQRAISVAKGETYSLLIRAIKNHRLDLIFHPYGKNV

AT4G08840.1 pumilio 112.2e-3628.72Show/hide
Query:  IMLRLIEGGNLSETRMIIEVIKDQLHEIMVDRAGNCFVQSLLEFCHENFIDHLLLSLIRKEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDH
        ++ + ++ GN  +  +I + + + + E+  D  GN  +Q L+E C+E     +L+ L  K    V + ++N G + V KL++ +    Q S +  A+   
Subjt:  IMLRLIEGGNLSETRMIIEVIKDQLHEIMVDRAGNCFVQSLLEFCHENFIDHLLLSLIRKEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDH

Query:  AFTLAKSFNGGHVVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYAIGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGT
          +L +  NG HV+L +C   F    N+ IL    + C+E++  + GCC+LQ C+ Y++GE  E  V  + +++  L++  +GNY++Q++I+      G 
Subjt:  AFTLAKSFNGGHVVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYAIGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGT

Query:  RIIKELRNKFVGLSLDKYGSNVVERCLSCCESGVNQIIFEIMENDETRVRVCTNEYGNYVVQRAISVAKGETYSLLIRAIKNHRLDLIFHPYGKNV
         ++ ELR  +V L+  K+GS+VVE+CL       +QI+ E++        +  + Y NYV+Q A+S  KG   + L+  ++ +  +L   PY K +
Subjt:  RIIKELRNKFVGLSLDKYGSNVVERCLSCCESGVNQIIFEIMENDETRVRVCTNEYGNYVVQRAISVAKGETYSLLIRAIKNHRLDLIFHPYGKNV

AT5G56510.1 pumilio 122.5e-4033.33Show/hide
Query:  SETRMIIEVIKDQLHEIMVDRAGNCFVQSLLEFCHENFIDHLLLSLIRKEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDHAFTLAKSFNGG
        ++  MI   I D + E+M+D  GN  VQ LLE C+E+    ++ S+ RK    + +  D  G +AV K+++  K   + S I  A+      L K+ NG 
Subjt:  SETRMIIEVIKDQLHEIMVDRAGNCFVQSLLEFCHENFIDHLLLSLIRKEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDHAFTLAKSFNGG

Query:  HVVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYAIGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGTRIIKELRNKFV
        HVV + C         + +       C+EL+ D+ GCC+LQ C+ Y+ GE ++  VS +  +A  LS+  +GNYV+Q++ +L        I+++L   + 
Subjt:  HVVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYAIGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGTRIIKELRNKFV

Query:  GLSLDKYGSNVVERCLSCCESGVNQIIFEIMENDETRVRVCTNEYGNYVVQRAISVAKGETYSLLIRAIKNHRLDLIFHPYGKNVIGA
         LS+ K  SNVVE+CL   +      I   + N     +V  + YGNYV+Q A+  +KG  ++LL+ AIK +   L  +PYGK V+ A
Subjt:  GLSLDKYGSNVVERCLSCCESGVNQIIFEIMENDETRVRVCTNEYGNYVVQRAISVAKGETYSLLIRAIKNHRLDLIFHPYGKNVIGA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAAAACCACTTTCCTTCATGGGAGAATCTCTCAAACTCCATGGAATTTGGAAATCAATCAACCCTTTTCAACTCCATATTTTCAAATGATCAAATTCTTCCTCG
TGGAAACAACTTCATCGACCGAAACGATAGAGATTCGAATCGCTACTCCATAAACAATGGCCATACCGACGCTCGTGGCAGCAACTTCTTTCAACGACACATTGAGAACG
GTGCGAGGAATGTTCATGGCCAGAGGTCGAGTTTTCGGTCGTCGGCAGCGGGGATCGGGGCAGTGGGGCCGAGGAACGGCCGCCATGGGAGAGGAATGGGGAGCAGAGAG
ATCATGAATGAGCTTGATTTCAAAGCAATAATGTTGAGGTTGATTGAAGGTGGGAACTTGAGTGAAACTCGAATGATCATTGAAGTAATAAAGGATCAACTTCATGAAAT
AATGGTTGATCGAGCTGGAAACTGCTTTGTTCAGAGTCTGCTTGAATTTTGCCATGAAAACTTTATCGATCATCTTCTTCTTTCCCTAATCAGAAAAGAAGAATTCTTCG
TCCTTGTGTGTCTCGATAATCTCGGACATCAAGCCGTGGTGAAATTGATGGATCGTCTAAAATGGCCTTATCAACAATCAACCATTGCATTGGCGATCAGCGACCATGCC
TTCACTTTGGCTAAAAGCTTCAATGGTGGCCATGTAGTGCTCAAGCATTGCTTCCTAAATTTCCCTCGACAAACTAATGAGTTGATCCTCCTTAGAATGGCACAAAGTTG
CTTAGAGCTCAGCAGAGATCAAGCTGGTTGTTGTATACTTCAAGTTTGCATAGAATATGCCATTGGAGAAGTTCAAGAAGCATTTGTGTCTCCATTAATACAAGACGCGG
AGAATCTTTCAAGACATGTTTACGGGAACTATGTAATACAATTTATGATTCAATTGGATGGAGCAACCATAGGAACAAGGATAATAAAAGAGCTTAGGAACAAGTTTGTA
GGGCTTTCTTTGGACAAGTATGGGAGCAATGTGGTGGAAAGATGCCTCTCTTGTTGTGAAAGTGGAGTTAATCAGATCATCTTTGAAATCATGGAGAATGATGAGACTCG
AGTTCGGGTTTGTACGAACGAATACGGGAATTATGTTGTCCAGAGAGCCATATCTGTTGCTAAGGGAGAAACTTATAGTTTACTTATAAGAGCCATTAAGAATCACCGAC
TCGATCTTATATTCCATCCATATGGAAAAAATGTGATTGGTGCAACCAAACGTATTAGAAGTCCAAACCACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAAAACCACTTTCCTTCATGGGAGAATCTCTCAAACTCCATGGAATTTGGAAATCAATCAACCCTTTTCAACTCCATATTTTCAAATGATCAAATTCTTCCTCG
TGGAAACAACTTCATCGACCGAAACGATAGAGATTCGAATCGCTACTCCATAAACAATGGCCATACCGACGCTCGTGGCAGCAACTTCTTTCAACGACACATTGAGAACG
GTGCGAGGAATGTTCATGGCCAGAGGTCGAGTTTTCGGTCGTCGGCAGCGGGGATCGGGGCAGTGGGGCCGAGGAACGGCCGCCATGGGAGAGGAATGGGGAGCAGAGAG
ATCATGAATGAGCTTGATTTCAAAGCAATAATGTTGAGGTTGATTGAAGGTGGGAACTTGAGTGAAACTCGAATGATCATTGAAGTAATAAAGGATCAACTTCATGAAAT
AATGGTTGATCGAGCTGGAAACTGCTTTGTTCAGAGTCTGCTTGAATTTTGCCATGAAAACTTTATCGATCATCTTCTTCTTTCCCTAATCAGAAAAGAAGAATTCTTCG
TCCTTGTGTGTCTCGATAATCTCGGACATCAAGCCGTGGTGAAATTGATGGATCGTCTAAAATGGCCTTATCAACAATCAACCATTGCATTGGCGATCAGCGACCATGCC
TTCACTTTGGCTAAAAGCTTCAATGGTGGCCATGTAGTGCTCAAGCATTGCTTCCTAAATTTCCCTCGACAAACTAATGAGTTGATCCTCCTTAGAATGGCACAAAGTTG
CTTAGAGCTCAGCAGAGATCAAGCTGGTTGTTGTATACTTCAAGTTTGCATAGAATATGCCATTGGAGAAGTTCAAGAAGCATTTGTGTCTCCATTAATACAAGACGCGG
AGAATCTTTCAAGACATGTTTACGGGAACTATGTAATACAATTTATGATTCAATTGGATGGAGCAACCATAGGAACAAGGATAATAAAAGAGCTTAGGAACAAGTTTGTA
GGGCTTTCTTTGGACAAGTATGGGAGCAATGTGGTGGAAAGATGCCTCTCTTGTTGTGAAAGTGGAGTTAATCAGATCATCTTTGAAATCATGGAGAATGATGAGACTCG
AGTTCGGGTTTGTACGAACGAATACGGGAATTATGTTGTCCAGAGAGCCATATCTGTTGCTAAGGGAGAAACTTATAGTTTACTTATAAGAGCCATTAAGAATCACCGAC
TCGATCTTATATTCCATCCATATGGAAAAAATGTGATTGGTGCAACCAAACGTATTAGAAGTCCAAACCACTAG
Protein sequenceShow/hide protein sequence
MAENHFPSWENLSNSMEFGNQSTLFNSIFSNDQILPRGNNFIDRNDRDSNRYSINNGHTDARGSNFFQRHIENGARNVHGQRSSFRSSAAGIGAVGPRNGRHGRGMGSRE
IMNELDFKAIMLRLIEGGNLSETRMIIEVIKDQLHEIMVDRAGNCFVQSLLEFCHENFIDHLLLSLIRKEEFFVLVCLDNLGHQAVVKLMDRLKWPYQQSTIALAISDHA
FTLAKSFNGGHVVLKHCFLNFPRQTNELILLRMAQSCLELSRDQAGCCILQVCIEYAIGEVQEAFVSPLIQDAENLSRHVYGNYVIQFMIQLDGATIGTRIIKELRNKFV
GLSLDKYGSNVVERCLSCCESGVNQIIFEIMENDETRVRVCTNEYGNYVVQRAISVAKGETYSLLIRAIKNHRLDLIFHPYGKNVIGATKRIRSPNH