| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG7022471.1 DNA-directed RNA polymerases II, IV and V subunit 3 [Cucurbita argyrosperma subsp. argyrosperma] | 4.0e-167 | 89.17 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEGASYQRFPKVKIRELRDDYAKFEL DTD SMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRA
FCSVEFHLRAKCHSDQTLDV+SKDLYSSDHTVVPVDFSD+AAA GEALDT + L ++ A SAI + G GIIIVKLRRGQELRLRA
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRA
Query: IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFI
IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEK +WVES PT+VFELDPVTHQV+VVDPEAYTYDDEVIKKAEAMGKAGLVDITA+EDSFI
Subjt: IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFI
Query: FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRG
FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRG
Subjt: FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRG
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| XP_004138895.1 DNA-directed RNA polymerases II, IV and V subunit 3 [Cucumis sativus] | 7.3e-169 | 90.03 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEG+SYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRA
FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSD+AAATGEALDTK GIIIVKLRRGQELRLRA
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRA
Query: IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFI
IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELD VTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFI
Subjt: IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFI
Query: FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRG
FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRG
Subjt: FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRG
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| XP_008441761.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV and V subunit 3-like [Cucumis melo] | 1.2e-168 | 89.74 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEG+SYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRA
FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSD+AAATGEALDTK GIIIVKLRRGQELRLRA
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRA
Query: IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFI
IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEK TWVESCPTRVFELDPVTHQVMVV+PEAYTYDDEVIKKAEAMGKAGLVDITAREDSFI
Subjt: IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFI
Query: FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRG
FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRG
Subjt: FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRG
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| XP_022147788.1 DNA-directed RNA polymerases II, IV and V subunit 3-like [Momordica charantia] | 2.9e-165 | 87.75 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRA
FCSVEFHLRAKCHSDQTLDVTSKDL SSDHTVVPVDF+D+AAA+GE LDTK GIIIVKLRRGQELRLRA
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRA
Query: IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFI
IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEE++TWVESCPTRVFE+DP THQV+VVDPEAYTYDDEVIKKAEAMGKAGLVDITA+EDSFI
Subjt: IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFI
Query: FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRG
FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRG
Subjt: FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRG
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| XP_038891253.1 DNA-directed RNA polymerases II, IV and V subunit 3-like [Benincasa hispida] | 2.2e-165 | 88.03 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEG+SYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRA
FCSVEFHLRAKCH+DQTLDVTSKDLYSSDHTVVPVDFSD+AAATGEALD+K GIIIVKLRRGQELRLRA
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRA
Query: IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFI
IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM+TLT EEKRTWVESCPTRVFE D VTHQV VVDPEAYTYDDEVIKKAEAMGKAGLVDITA+EDSFI
Subjt: IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFI
Query: FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRG
FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRG
Subjt: FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LHS1 RPOLD domain-containing protein | 3.5e-169 | 90.03 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEG+SYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRA
FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSD+AAATGEALDTK GIIIVKLRRGQELRLRA
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRA
Query: IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFI
IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELD VTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFI
Subjt: IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFI
Query: FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRG
FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRG
Subjt: FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRG
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| A0A1S3B3P9 LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV and V subunit 3-like | 6.0e-169 | 89.74 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEG+SYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRA
FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSD+AAATGEALDTK GIIIVKLRRGQELRLRA
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRA
Query: IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFI
IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEK TWVESCPTRVFELDPVTHQVMVV+PEAYTYDDEVIKKAEAMGKAGLVDITAREDSFI
Subjt: IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFI
Query: FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRG
FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRG
Subjt: FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRG
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| A0A6J1D221 DNA-directed RNA polymerases II, IV and V subunit 3-like | 1.4e-165 | 87.75 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRA
FCSVEFHLRAKCHSDQTLDVTSKDL SSDHTVVPVDF+D+AAA+GE LDTK GIIIVKLRRGQELRLRA
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRA
Query: IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFI
IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEE++TWVESCPTRVFE+DP THQV+VVDPEAYTYDDEVIKKAEAMGKAGLVDITA+EDSFI
Subjt: IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFI
Query: FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRG
FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRG
Subjt: FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRG
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| A0A6J1ELW4 DNA-directed RNA polymerases II, IV and V subunit 3-like | 5.3e-165 | 87.75 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEGASYQRFPKVKIRELRDDYAKFEL DTD SMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRA
FCSVEFHLRAKCHSDQTLDV+SKDLYSSDHTVVPVDFSD+AAA GEALDTK GIIIVKLRRGQELRLRA
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRA
Query: IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFI
IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEK +WVES PT+VFELDPVTHQV+VVDPEAYTYDDEVIKKAEAMGKAGLVDITA+EDSFI
Subjt: IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFI
Query: FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRG
FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRG
Subjt: FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRG
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| A0A6J1JIE7 DNA-directed RNA polymerases II, IV and V subunit 3-like | 5.3e-165 | 87.75 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEGASYQRFPKVKIRELRDDYAKFEL DTD SMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRA
FCSVEFHLRAKCHSDQTLDV+SKDLYSSDHTVVPVDFSD+AAA GEALDTK GIIIVKLRRGQELRLRA
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRA
Query: IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFI
IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEK +WVES PT+VFELDPVTHQV+VVDPEAYTYDDEVIKKAEAMGKAGLVDITA+EDSFI
Subjt: IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFI
Query: FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRG
FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRG
Subjt: FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P97760 DNA-directed RNA polymerase II subunit RPB3 | 6.5e-43 | 36.65 | Show/hide |
Query: YQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAM-SMRFSRDCDACDGDGQCEFCSV
Y P V+I EL ++ KF + +TD ++AN++RRV IAEVP IAID V+I+ NSSVL+DEFIAHRLGLIPLTS+ + +++SRDC + C CSV
Subjt: YQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAM-SMRFSRDCDACDGDGQCEFCSV
Query: EFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRAIARK
EF L +C+ DQT VTS+DL S+ V+PV + + ++ I+IVKLR+GQELRLRA A+K
Subjt: EFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRAIARK
Query: GIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVE
G GK+HAKW+P A V F Y+P ++ + + W +S ELD D YD + + F + VE
Subjt: GIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVE
Query: STGAIKASQLILNAIDILKQKL
S G+++ ++L+A+ LK+KL
Subjt: STGAIKASQLILNAIDILKQKL
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| Q39211 DNA-directed RNA polymerases II, IV and V subunit 3 | 1.8e-141 | 74.64 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
M+GA+YQRFPK+KIREL+DDYAKFELR+TD SMANALRRVMI+EVPT+AIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRA
FCSVEF L +KC +DQTLDVTS+DLYS+D TV PVDF+ + S+ S GIIIVKLRRGQEL+LRA
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRA
Query: IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFI
IARKGIGKDHAKWSPAATVTFMYEP I INED+M+TL+ EEK +ES PT+VF +DPVT QV+VVDPEAYTYD+EVIKKAEAMGK GL++I+ ++DSFI
Subjt: IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFI
Query: FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRG
FTVESTGA+KASQL+LNAID+LKQKLDAVRLSDDTVEADDQFGELGAHMRG
Subjt: FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRG
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| Q39212 DNA-directed RNA polymerases IV and V subunit 3B | 3.1e-130 | 69.71 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
M+G +YQRFP VKIREL+DDYAKFELR+TD SMANALRRVMI+EVPT+AI LV+IEVNSSVLNDEFIA RL LIPLTSERAMSMRF +DC+ C+GD CE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRA
FCSVEF L AKC +DQTLDVTS+DLYS+D TV PVDF+ + ++T ++ + K GIII KLRRGQEL+L+A
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRA
Query: IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFI
+ARKGIGKDHAKWSPAATVT+MYEP I INE++M TLT EEK +ES PT+VF +DPVT QV+VVDPEAYTYD+EVIKKAEAMGK GL++I + DSF+
Subjt: IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFI
Query: FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMR
FTVESTGA+KASQL+LNAIDILKQKLDA+RLSD+TVEADDQFGELGAHMR
Subjt: FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMR
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| Q3T0Q3 DNA-directed RNA polymerase II subunit RPB3 | 2.2e-43 | 36.96 | Show/hide |
Query: YQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAM-SMRFSRDCDACDGDGQCEFCSV
Y P V+I EL D+ KF + +TD ++AN++RRV IAEVP IAID V+I+ NSSVL+DEFIAHRLGLIPLTS+ + +++SRDC + C CSV
Subjt: YQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAM-SMRFSRDCDACDGDGQCEFCSV
Query: EFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRAIARK
EF L +C+ DQT VTS+DL S+ V+PV + + ++ I+IVKLR+GQELRLRA A+K
Subjt: EFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRAIARK
Query: GIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVE
G GK+HAKW+P A V F Y+P ++ + + W +S ELD D YD + + F + VE
Subjt: GIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVE
Query: STGAIKASQLILNAIDILKQKL
S G+++ ++L+A+ LK+KL
Subjt: STGAIKASQLILNAIDILKQKL
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| Q54DH7 DNA-directed RNA polymerase II subunit rpb3 | 7.1e-66 | 44.62 | Show/hide |
Query: RFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFH
R P+++I E+++D F L +TD S+ANALRRVMIAEVPT+ IDLVE E N+SVL DEFIAHRLGLIPL S+ ++RDC D +C+ CSVE
Subjt: RFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFH
Query: LRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRAIARKGIG
L KC ++ DVTS DL S + V+PV S ++ E I IVKLRRGQE++LRAIA+KG+G
Subjt: LRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRAIARKGIG
Query: KDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDP--VTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVES
K+HAKWSP+ T+ ++P I +N++ ++ LT ++K WV SCPT+V+ P T QV + DP Y E KKAE+ GK LV + ++D FIFTVES
Subjt: KDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDP--VTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVES
Query: TGAIKASQLILNAIDILKQKLDAVR
+GA+K ++L AI I+K+KL ++
Subjt: TGAIKASQLILNAIDILKQKLDAVR
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G60850.1 DNA-directed RNA polymerase family protein | 2.7e-28 | 30.51 | Show/hide |
Query: GASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFC
G Y F KV + L +F++ DA+ ANA RR++IAEVP++AI+ V I N+SV+ DE +AHR+GLIP+ ++ + S + D E
Subjt: GASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFC
Query: SVEFHLRAKCHSDQ-TLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRAI
++ F L KC ++ L V + DL + + E+ + P T S S ++ ++ +P L I+I KL GQE+ L A
Subjt: SVEFHLRAKCHSDQ-TLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRAI
Query: ARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPV---THQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDS
A KGIGK HAKWSP T + P + + ++ + L V CP VF+++ + + V P T E ++ + + VD+ + ++
Subjt: ARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPV---THQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDS
Query: FIFTVESTGAIKASQLILNAIDILKQKLDAV
FIF +ESTG++ L A+ IL+ K +A+
Subjt: FIFTVESTGAIKASQLILNAIDILKQKLDAV
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| AT1G60850.2 DNA-directed RNA polymerase family protein | 2.7e-28 | 30.51 | Show/hide |
Query: GASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFC
G Y F KV + L +F++ DA+ ANA RR++IAEVP++AI+ V I N+SV+ DE +AHR+GLIP+ ++ + S + D E
Subjt: GASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFC
Query: SVEFHLRAKCHSDQ-TLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRAI
++ F L KC ++ L V + DL + + E+ + P T S S ++ ++ +P L I+I KL GQE+ L A
Subjt: SVEFHLRAKCHSDQ-TLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRAI
Query: ARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPV---THQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDS
A KGIGK HAKWSP T + P + + ++ + L V CP VF+++ + + V P T E ++ + + VD+ + ++
Subjt: ARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPV---THQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDS
Query: FIFTVESTGAIKASQLILNAIDILKQKLDAV
FIF +ESTG++ L A+ IL+ K +A+
Subjt: FIFTVESTGAIKASQLILNAIDILKQKLDAV
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| AT2G15400.1 DNA-directed RNA polymerase family protein | 2.2e-131 | 69.71 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
M+G +YQRFP VKIREL+DDYAKFELR+TD SMANALRRVMI+EVPT+AI LV+IEVNSSVLNDEFIA RL LIPLTSERAMSMRF +DC+ C+GD CE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRA
FCSVEF L AKC +DQTLDVTS+DLYS+D TV PVDF+ + ++T ++ + K GIII KLRRGQEL+L+A
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRA
Query: IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFI
+ARKGIGKDHAKWSPAATVT+MYEP I INE++M TLT EEK +ES PT+VF +DPVT QV+VVDPEAYTYD+EVIKKAEAMGK GL++I + DSF+
Subjt: IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFI
Query: FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMR
FTVESTGA+KASQL+LNAIDILKQKLDA+RLSD+TVEADDQFGELGAHMR
Subjt: FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMR
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| AT2G15400.2 DNA-directed RNA polymerase family protein | 8.8e-88 | 65.02 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
M+G +YQRFP VKIREL+DDYAKFELR+TD SMANALRRVMI+EVPT+AI LV+IEVNSSVLNDEFIA RL LIPLTSERAMSMRF +DC+ C+GD CE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRA
FCSVEF L AKC +DQTLDVTS+DLYS+D TV PVDF+ + ++T ++ + K GIII KLRRGQEL+L+A
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRA
Query: IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPVTHQV
+ARKGIGKDHAKWSPAATVT+MYEP I INE++M TLT EEK +ES PT+VF +DPVT QV
Subjt: IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPVTHQV
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| AT2G15430.1 DNA-directed RNA polymerase family protein | 1.3e-142 | 74.64 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
M+GA+YQRFPK+KIREL+DDYAKFELR+TD SMANALRRVMI+EVPT+AIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRA
FCSVEF L +KC +DQTLDVTS+DLYS+D TV PVDF+ + S+ S GIIIVKLRRGQEL+LRA
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKYFPLTLLSISIVAIFSAILSYSIGLGSPRPGLGIIIVKLRRGQELRLRA
Query: IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFI
IARKGIGKDHAKWSPAATVTFMYEP I INED+M+TL+ EEK +ES PT+VF +DPVT QV+VVDPEAYTYD+EVIKKAEAMGK GL++I+ ++DSFI
Subjt: IARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFI
Query: FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRG
FTVESTGA+KASQL+LNAID+LKQKLDAVRLSDDTVEADDQFGELGAHMRG
Subjt: FTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRG
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