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Lag0014600 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014600
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionclassical arabinogalactan protein 4
Genome locationchr12:2518262..2518711
RNA-Seq ExpressionLag0014600
SyntenyLag0014600
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008462882.1 PREDICTED: classical arabinogalactan protein 4 [Cucumis melo]2.7e-0745.16Show/hide
Query:  MPHSPLLNALLAAALLLSAAALSPAPSPTPQAAPSPPWRWTPVTKP--------PPPATQSPPQ---TKPSTPPSSSPAPAP--------------SPTP
        M  S LLN L  A LL+SAAA SPAPSP P +A SP W+WTP  +P        PP  T SPP    + P+TPP  SP P+               SPT 
Subjt:  MPHSPLLNALLAAALLLSAAALSPAPSPTPQAAPSPPWRWTPVTKP--------PPPATQSPPQ---TKPSTPPSSSPAPAP--------------SPTP

Query:  VPPA--SPHHAPS-----APPASPPLQSPSPSSIP-----PSDLPPSWIG----GPPSEAPAPSKEKSNAFSNRLSIVGSVAIGAM
         PPA  SP HAPS     AP  +P   SP+P+  P     P   PPS  G      PSEAPAPSKE + A +NR +I GS+A G M
Subjt:  VPPA--SPHHAPS-----APPASPPLQSPSPSSIP-----PSDLPPSWIG----GPPSEAPAPSKEKSNAFSNRLSIVGSVAIGAM

XP_011659717.1 vegetative cell wall protein gp1 [Cucumis sativus]8.0e-2058.78Show/hide
Query:  MPHSPLLNALLAAALLLSAAAL--SPAPSPTPQAAPSPPWRWTPVTKPPPPATQSPPQTKPSTPPSSSPAPAPSPTPVPPASPHHAPSAPPASPPLQSPS
        MPHS LLNALLAAALL SAAA+  SP+PSPTP A+ SPPWRW P+TKPP        +T+PSTPP       PSPT VPP + H  P  P A P   SPS
Subjt:  MPHSPLLNALLAAALLLSAAAL--SPAPSPTPQAAPSPPWRWTPVTKPPPPATQSPPQTKPSTPPSSSPAPAPSPTPVPPASPHHAPSAPPASPPLQSPS

Query:  PSSIPPSDLPPSWIGGPPSEAPAPSKEKSNAFSNRLSIVGSVAIGAMA
        PS        P+WI  PPSEA +PSK KS+ F N  S+VGSVAIGAMA
Subjt:  PSSIPPSDLPPSWIGGPPSEAPAPSKEKSNAFSNRLSIVGSVAIGAMA

XP_022141995.1 extensin-like [Momordica charantia]7.2e-2162.41Show/hide
Query:  LAAALLLSAAAL-SPAPSPTPQAAPSPPWRWTPVTKPPPPATQSPPQTKPSTPPSSSPAPAPSPTP--VPPASPHHAPSAPPASPPLQSPSPS-SIPPSD
        +AAALL SAAA   PAPSP+P A PSPPWRWTP  KPP P T S P   P   P SSPAP+PSPT   VPPA P  AP +PP  P  QSP+P  + PP+ 
Subjt:  LAAALLLSAAAL-SPAPSPTPQAAPSPPWRWTPVTKPPPPATQSPPQTKPSTPPSSSPAPAPSPTP--VPPASPHHAPSAPPASPPLQSPSPS-SIPPSD

Query:  LP-PSWIGGPPSEAPAPSKEKSNAFSNRLSIVGSVAIGAMA
         P PSWI GPP++A APSK KSNA  NR S+VGSV IGAMA
Subjt:  LP-PSWIGGPPSEAPAPSKEKSNAFSNRLSIVGSVAIGAMA

XP_038877309.1 vegetative cell wall protein gp1-like [Benincasa hispida]1.5e-0543.78Show/hide
Query:  MPHSPLLNALLAAALLLSAAALSPAPSPTPQAAPSPPWRWTPVTKPP-------PPATQSPPQ---TKPSTPPSSSPAP---AP-----------SPTPV
        M  S +L  L  A LL+SAAA SP PSP P    SP W+WTP  +PP       PP T SPP    + P+TPP  SP P   AP           SPT  
Subjt:  MPHSPLLNALLAAALLLSAAALSPAPSPTPQAAPSPPWRWTPVTKPP-------PPATQSPPQ---TKPSTPPSSSPAP---AP-----------SPTPV

Query:  PPA--SPHHAPS-----APPASPPLQSPSPSSIP-----PSDLPPSWIG----GPPSEAPAPSKEKSNAFSNRLSIVGSVAIGAM
        PP   SP HAPS     AP  +P   SPSP+  P     P+  PPS  G      PS APAPSK+ +   +NR +I GSVA+G M
Subjt:  PPA--SPHHAPS-----APPASPPLQSPSPSSIP-----PSDLPPSWIG----GPPSEAPAPSKEKSNAFSNRLSIVGSVAIGAM

XP_038887113.1 anther-specific proline-rich protein APG-like [Benincasa hispida]3.9e-2767.11Show/hide
Query:  MPHSPLLNALLAAALLLSAAAL-SPAPSP----TPQAAPSPPWRWTPVTKPPPPATQSPPQTKPSTPPSSSPAPAPSPTPVPPASPHHAPSAPPASPPLQ
        MPHS LLNALLAAALL SAAA  +PAPSP    TP A+PSPPWRWTP+TKPPP +T S  ++KP TPP SSP P PSPTPV P   HHAP+  P S PLQ
Subjt:  MPHSPLLNALLAAALLLSAAAL-SPAPSP----TPQAAPSPPWRWTPVTKPPPPATQSPPQTKPSTPPSSSPAPAPSPTPVPPASPHHAPSAPPASPPLQ

Query:  -SPSPSSIPPSDLPPSWIGGPPSEAPAPSKEKSNAFSNRLSIVGSVAIGAMA
         SPSPS  P     PSWI  PP EAPAPSK KS+AF+NR S+V SVAI AMA
Subjt:  -SPSPSSIPPSDLPPSWIGGPPSEAPAPSKEKSNAFSNRLSIVGSVAIGAMA

TrEMBL top hitse value%identityAlignment
A0A0A0K238 Uncharacterized protein3.9e-2058.78Show/hide
Query:  MPHSPLLNALLAAALLLSAAAL--SPAPSPTPQAAPSPPWRWTPVTKPPPPATQSPPQTKPSTPPSSSPAPAPSPTPVPPASPHHAPSAPPASPPLQSPS
        MPHS LLNALLAAALL SAAA+  SP+PSPTP A+ SPPWRW P+TKPP        +T+PSTPP       PSPT VPP + H  P  P A P   SPS
Subjt:  MPHSPLLNALLAAALLLSAAAL--SPAPSPTPQAAPSPPWRWTPVTKPPPPATQSPPQTKPSTPPSSSPAPAPSPTPVPPASPHHAPSAPPASPPLQSPS

Query:  PSSIPPSDLPPSWIGGPPSEAPAPSKEKSNAFSNRLSIVGSVAIGAMA
        PS        P+WI  PPSEA +PSK KS+ F N  S+VGSVAIGAMA
Subjt:  PSSIPPSDLPPSWIGGPPSEAPAPSKEKSNAFSNRLSIVGSVAIGAMA

A0A1S3CHW9 classical arabinogalactan protein 41.3e-0745.16Show/hide
Query:  MPHSPLLNALLAAALLLSAAALSPAPSPTPQAAPSPPWRWTPVTKP--------PPPATQSPPQ---TKPSTPPSSSPAPAP--------------SPTP
        M  S LLN L  A LL+SAAA SPAPSP P +A SP W+WTP  +P        PP  T SPP    + P+TPP  SP P+               SPT 
Subjt:  MPHSPLLNALLAAALLLSAAALSPAPSPTPQAAPSPPWRWTPVTKP--------PPPATQSPPQ---TKPSTPPSSSPAPAP--------------SPTP

Query:  VPPA--SPHHAPS-----APPASPPLQSPSPSSIP-----PSDLPPSWIG----GPPSEAPAPSKEKSNAFSNRLSIVGSVAIGAM
         PPA  SP HAPS     AP  +P   SP+P+  P     P   PPS  G      PSEAPAPSKE + A +NR +I GS+A G M
Subjt:  VPPA--SPHHAPS-----APPASPPLQSPSPSSIP-----PSDLPPSWIG----GPPSEAPAPSKEKSNAFSNRLSIVGSVAIGAM

A0A5A7V3Q7 Classical arabinogalactan protein 41.3e-0745.16Show/hide
Query:  MPHSPLLNALLAAALLLSAAALSPAPSPTPQAAPSPPWRWTPVTKP--------PPPATQSPPQ---TKPSTPPSSSPAPAP--------------SPTP
        M  S LLN L  A LL+SAAA SPAPSP P +A SP W+WTP  +P        PP  T SPP    + P+TPP  SP P+               SPT 
Subjt:  MPHSPLLNALLAAALLLSAAALSPAPSPTPQAAPSPPWRWTPVTKP--------PPPATQSPPQ---TKPSTPPSSSPAPAP--------------SPTP

Query:  VPPA--SPHHAPS-----APPASPPLQSPSPSSIP-----PSDLPPSWIG----GPPSEAPAPSKEKSNAFSNRLSIVGSVAIGAM
         PPA  SP HAPS     AP  +P   SP+P+  P     P   PPS  G      PSEAPAPSKE + A +NR +I GS+A G M
Subjt:  VPPA--SPHHAPS-----APPASPPLQSPSPSSIP-----PSDLPPSWIG----GPPSEAPAPSKEKSNAFSNRLSIVGSVAIGAM

A0A6J1CJN4 extensin-like3.5e-2162.41Show/hide
Query:  LAAALLLSAAAL-SPAPSPTPQAAPSPPWRWTPVTKPPPPATQSPPQTKPSTPPSSSPAPAPSPTP--VPPASPHHAPSAPPASPPLQSPSPS-SIPPSD
        +AAALL SAAA   PAPSP+P A PSPPWRWTP  KPP P T S P   P   P SSPAP+PSPT   VPPA P  AP +PP  P  QSP+P  + PP+ 
Subjt:  LAAALLLSAAAL-SPAPSPTPQAAPSPPWRWTPVTKPPPPATQSPPQTKPSTPPSSSPAPAPSPTP--VPPASPHHAPSAPPASPPLQSPSPS-SIPPSD

Query:  LP-PSWIGGPPSEAPAPSKEKSNAFSNRLSIVGSVAIGAMA
         P PSWI GPP++A APSK KSNA  NR S+VGSV IGAMA
Subjt:  LP-PSWIGGPPSEAPAPSKEKSNAFSNRLSIVGSVAIGAMA

A0A7J7PQK5 Uncharacterized protein7.1e-0650.94Show/hide
Query:  SPAPSPTPQAAPSPPWRWTPVTKPPP-PATQSPPQTKPSTPPSSSPAPAPSPTPVPPASPHHAPSAPPASPPLQSPSPSSIPPSDLPPSWIGGPPSEAPA
        SP+PSP+P  +PSPP   +P   PPP P+   PP   PS PPS SP+P+PSP+P PP SP  +PS PP+  P  SPSPS  PP    PS    PPS +P+
Subjt:  SPAPSPTPQAAPSPPWRWTPVTKPPP-PATQSPPQTKPSTPPSSSPAPAPSPTPVPPASPHHAPSAPPASPPLQSPSPSSIPPSDLPPSWIGGPPSEAPA

Query:  PSKEKS
        PS   S
Subjt:  PSKEKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCACTCACCGCTTCTCAACGCCCTCTTGGCGGCGGCGCTGCTCCTCTCCGCCGCCGCTCTCTCGCCGGCACCTTCGCCAACTCCGCAGGCCGCCCCTTCGCCGCC
CTGGAGATGGACCCCCGTCACAAAGCCTCCTCCACCCGCAACACAGTCGCCGCCTCAGACCAAGCCCAGCACTCCACCGTCGTCTTCTCCGGCACCGGCACCGTCGCCCA
CCCCAGTTCCGCCGGCATCGCCACACCATGCACCGAGTGCACCTCCAGCTTCCCCGCCGCTGCAGAGCCCTTCTCCGTCGTCCATTCCGCCGTCCGATCTACCTCCGTCG
TGGATCGGCGGTCCGCCGTCGGAAGCACCGGCGCCATCGAAAGAGAAGAGCAACGCCTTTAGTAACAGATTATCGATCGTTGGATCGGTGGCTATTGGAGCCATGGCTTT
AATGGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCACTCACCGCTTCTCAACGCCCTCTTGGCGGCGGCGCTGCTCCTCTCCGCCGCCGCTCTCTCGCCGGCACCTTCGCCAACTCCGCAGGCCGCCCCTTCGCCGCC
CTGGAGATGGACCCCCGTCACAAAGCCTCCTCCACCCGCAACACAGTCGCCGCCTCAGACCAAGCCCAGCACTCCACCGTCGTCTTCTCCGGCACCGGCACCGTCGCCCA
CCCCAGTTCCGCCGGCATCGCCACACCATGCACCGAGTGCACCTCCAGCTTCCCCGCCGCTGCAGAGCCCTTCTCCGTCGTCCATTCCGCCGTCCGATCTACCTCCGTCG
TGGATCGGCGGTCCGCCGTCGGAAGCACCGGCGCCATCGAAAGAGAAGAGCAACGCCTTTAGTAACAGATTATCGATCGTTGGATCGGTGGCTATTGGAGCCATGGCTTT
AATGGTTTAA
Protein sequenceShow/hide protein sequence
MPHSPLLNALLAAALLLSAAALSPAPSPTPQAAPSPPWRWTPVTKPPPPATQSPPQTKPSTPPSSSPAPAPSPTPVPPASPHHAPSAPPASPPLQSPSPSSIPPSDLPPS
WIGGPPSEAPAPSKEKSNAFSNRLSIVGSVAIGAMALMV