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Lag0014601 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014601
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPhloem filament protein
Genome locationchr12:2538016..2538372
RNA-Seq ExpressionLag0014601
SyntenyLag0014601
Gene Ontology termsNA
InterPro domainsIPR009994 - Phloem filament PP1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588756.1 hypothetical protein SDJN03_17321, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1143.43Show/hide
Query:  MAAVARIAPNDIVLK-AMDKSV--SNNWLPIPSVWDVIVDEVAKFAVEQYNIQFGGHYTFKNVDCGWYVELAGGKFLVHLHVVVTDFLGGTLKIEVVVS
        MAAV   APND + +  +D ++   + W+PIP+V ++ V  VAKFAVE YN++    + +KN+ CGW++EL G      LHV V D LG   +++VVVS
Subjt:  MAAVARIAPNDIVLK-AMDKSV--SNNWLPIPSVWDVIVDEVAKFAVEQYNIQFGGHYTFKNVDCGWYVELAGGKFLVHLHVVVTDFLGGTLKIEVVVS

KAG6588757.1 hypothetical protein SDJN03_17322, partial [Cucurbita argyrosperma subsp. sororia]5.9e-1040.4Show/hide
Query:  MAAVARIAPNDIVLKAMDKS---VSNNWLPIPSVWDVIVDEVAKFAVEQYNIQFGGHYTFKNVDCGWYVELAGGKFLVHLHVVVTDFLGGTLKIEVVVS
        MA VA++A ND + +          + W+ IP V +V V  VAKFAVE YN+     + +K++ CGW++EL G      LHV V D LG    ++VVVS
Subjt:  MAAVARIAPNDIVLKAMDKS---VSNNWLPIPSVWDVIVDEVAKFAVEQYNIQFGGHYTFKNVDCGWYVELAGGKFLVHLHVVVTDFLGGTLKIEVVVS

KAG6588758.1 hypothetical protein SDJN03_17323, partial [Cucurbita argyrosperma subsp. sororia]3.5e-1039.39Show/hide
Query:  MAAVARIAPNDIVLKAMDKS---VSNNWLPIPSVWDVIVDEVAKFAVEQYNIQFGGHYTFKNVDCGWYVELAGGKFLVHLHVVVTDFLGGTLKIEVVVS
        MA VA+IA ND + +          + W+ IP V +V V  +AKFAVE YN+     + +K++ CGW++EL G      LH+ V D LG   ++ VVVS
Subjt:  MAAVARIAPNDIVLKAMDKS---VSNNWLPIPSVWDVIVDEVAKFAVEQYNIQFGGHYTFKNVDCGWYVELAGGKFLVHLHVVVTDFLGGTLKIEVVVS

KAG6588759.1 hypothetical protein SDJN03_17324, partial [Cucurbita argyrosperma subsp. sororia]3.5e-1038.38Show/hide
Query:  MAAVARIAPNDIVLKAMDKS---VSNNWLPIPSVWDVIVDEVAKFAVEQYNIQFGGHYTFKNVDCGWYVELAGGKFLVHLHVVVTDFLGGTLKIEVVVS
        MA VA+IA ND + +          + W+ IP V +V V  +AKFAV+ YN+     + ++++ CGW++EL G      LH+VV D LG   +++VVVS
Subjt:  MAAVARIAPNDIVLKAMDKS---VSNNWLPIPSVWDVIVDEVAKFAVEQYNIQFGGHYTFKNVDCGWYVELAGGKFLVHLHVVVTDFLGGTLKIEVVVS

XP_023522970.1 uncharacterized protein LOC111787034 [Cucurbita pepo subsp. pepo]9.1e-1139.39Show/hide
Query:  MAAVARIAPNDIVLKAMDKS---VSNNWLPIPSVWDVIVDEVAKFAVEQYNIQFGGHYTFKNVDCGWYVELAGGKFLVHLHVVVTDFLGGTLKIEVVVS
        MA VA IA ND + +          + W+ IP V +V V  +AKFAV+ YN+     + +K++ CGW++EL G     HLH+ V D LG   +++VVVS
Subjt:  MAAVARIAPNDIVLKAMDKS---VSNNWLPIPSVWDVIVDEVAKFAVEQYNIQFGGHYTFKNVDCGWYVELAGGKFLVHLHVVVTDFLGGTLKIEVVVS

TrEMBL top hitse value%identityAlignment
A0A6J1EIQ8 uncharacterized protein LOC1114345175.6e-0640Show/hide
Query:  VSNNWLPIPSVWDVIVDEVAKFAVEQYNIQFGGHYTFKNVDCGWYVELAGGKFLVHLHVVVTDFLGGTLKIEVVV
        V   W+ IP V    + +VAKFAVE++N + G    + ++  GWY+EL        LH+   DFLG  L  EVVV
Subjt:  VSNNWLPIPSVWDVIVDEVAKFAVEQYNIQFGGHYTFKNVDCGWYVELAGGKFLVHLHVVVTDFLGGTLKIEVVV

A0A6J1EQ39 uncharacterized protein LOC111434636 isoform X21.6e-0540.85Show/hide
Query:  WLPIPSVWDVIVDEVAKFAVEQYNIQFGGHYTFKNVDCGWYVELAGGKFLVHLHVVVTDFLGGTLKIEVVV
        W+ IP V    V EVAK AVEQ+N+Q G    ++++  GWY EL        LH+   DFL  +L  E +V
Subjt:  WLPIPSVWDVIVDEVAKFAVEQYNIQFGGHYTFKNVDCGWYVELAGGKFLVHLHVVVTDFLGGTLKIEVVV

A0A6J1JG70 uncharacterized protein LOC111486626 isoform X29.5e-0642.68Show/hide
Query:  KAMDK-SVSNNWLPIPSVWDVIVDEVAKFAVEQYNIQFGGHYTFKNVDCGWYVELAGGKFLVHLHVVVTDFLGGTLKIEVVV
        K +D+  VS  W  IP V ++ +  V KF VEQ  I+FG    F+ V  GWY  L         HV V DFLG  LK EVV+
Subjt:  KAMDK-SVSNNWLPIPSVWDVIVDEVAKFAVEQYNIQFGGHYTFKNVDCGWYVELAGGKFLVHLHVVVTDFLGGTLKIEVVV

A0A6J1JKF7 uncharacterized protein LOC111486626 isoform X11.5e-0641.46Show/hide
Query:  KAMDK-SVSNNWLPIPSVWDVIVDEVAKFAVEQYNIQFGGHYTFKNVDCGWYVELAGGKFLVHLHVVVTDFLGGTLKIEVVV
        K +D+  VS  W  IP V ++ +  V KF VEQ  I+FG    F+ V  GWY EL         HV V DFLG +LK E+++
Subjt:  KAMDK-SVSNNWLPIPSVWDVIVDEVAKFAVEQYNIQFGGHYTFKNVDCGWYVELAGGKFLVHLHVVVTDFLGGTLKIEVVV

P94012 Phloem filament protein3.3e-0642.67Show/hide
Query:  VSNNWLPIPSVWDVIVDEVAKFAVEQYNIQFGGHYTFKNVDCGWYVELAGGKFLVHLHVVVTDFLGGTLKIEVVV
        VS  W  IP V ++ +  V KF VEQ  I+FG    F+ V  GWY EL         HV V DFLG +LK E+++
Subjt:  VSNNWLPIPSVWDVIVDEVAKFAVEQYNIQFGGHYTFKNVDCGWYVELAGGKFLVHLHVVVTDFLGGTLKIEVVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCGTTGCTCGTATCGCTCCCAATGACATCGTCCTCAAGGCGATGGACAAAAGCGTGAGCAATAATTGGTTACCAATTCCCAGCGTATGGGATGTTATTGTGGA
TGAAGTTGCAAAGTTTGCTGTGGAACAATACAACATTCAATTTGGGGGACATTACACATTCAAGAATGTTGATTGTGGTTGGTATGTGGAGCTGGCGGGTGGAAAATTTC
TGGTCCATCTTCATGTTGTGGTGACAGACTTTCTTGGTGGTACCTTAAAAATTGAGGTTGTTGTGTCTGTAGGACTCGACATTTTTGATCCCAAGAATTGGAACCTCGAA
GCTTTCAACCCCCTCGCAGTCAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCCGTTGCTCGTATCGCTCCCAATGACATCGTCCTCAAGGCGATGGACAAAAGCGTGAGCAATAATTGGTTACCAATTCCCAGCGTATGGGATGTTATTGTGGA
TGAAGTTGCAAAGTTTGCTGTGGAACAATACAACATTCAATTTGGGGGACATTACACATTCAAGAATGTTGATTGTGGTTGGTATGTGGAGCTGGCGGGTGGAAAATTTC
TGGTCCATCTTCATGTTGTGGTGACAGACTTTCTTGGTGGTACCTTAAAAATTGAGGTTGTTGTGTCTGTAGGACTCGACATTTTTGATCCCAAGAATTGGAACCTCGAA
GCTTTCAACCCCCTCGCAGTCAACTGA
Protein sequenceShow/hide protein sequence
MAAVARIAPNDIVLKAMDKSVSNNWLPIPSVWDVIVDEVAKFAVEQYNIQFGGHYTFKNVDCGWYVELAGGKFLVHLHVVVTDFLGGTLKIEVVVSVGLDIFDPKNWNLE
AFNPLAVN