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Lag0014615 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014615
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr12:2670606..2671393
RNA-Seq ExpressionLag0014615
SyntenyLag0014615
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]7.1e-0461.11Show/hide
Query:  PKKVKFFIWELSHACTNTADVIQRRNSNLALSPSYC
        PKK KFFIW L H C NTAD +Q+R  N  LSP++C
Subjt:  PKKVKFFIWELSHACTNTADVIQRRNSNLALSPSYC
KAA0041397.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]7.1e-0461.11Show/hide
Query:  PKKVKFFIWELSHACTNTADVIQRRNSNLALSPSYC
        PKK KFFIW L H C NTAD +Q+R  N  LSP++C
Subjt:  PKKVKFFIWELSHACTNTADVIQRRNSNLALSPSYC
KAA0044451.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.4e-0463.89Show/hide
Query:  PKKVKFFIWELSHACTNTADVIQRRNSNLALSPSYC
        PKK KFFIW L H C NTAD +Q+R  N ALSP++C
Subjt:  PKKVKFFIWELSHACTNTADVIQRRNSNLALSPSYC
KAA0044556.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]7.1e-0461.11Show/hide
Query:  PKKVKFFIWELSHACTNTADVIQRRNSNLALSPSYC
        PKK KFFIW L H C NTAD +Q+R  N  LSP++C
Subjt:  PKKVKFFIWELSHACTNTADVIQRRNSNLALSPSYC
TYK29578.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.4e-0463.89Show/hide
Query:  PKKVKFFIWELSHACTNTADVIQRRNSNLALSPSYC
        PKK KFFIW L H C NTAD +Q+R  N ALSP++C
Subjt:  PKKVKFFIWELSHACTNTADVIQRRNSNLALSPSYC
TrEMBL top hitse value%identityAlignment
A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein3.4e-0461.11Show/hide
Query:  PKKVKFFIWELSHACTNTADVIQRRNSNLALSPSYC
        PKK KFFIW L H C NTAD +Q+R  N  LSP++C
Subjt:  PKKVKFFIWELSHACTNTADVIQRRNSNLALSPSYC
A0A5A7TIB8 LINE-1 retrotransposable element ORF2 protein3.4e-0461.11Show/hide
Query:  PKKVKFFIWELSHACTNTADVIQRRNSNLALSPSYC
        PKK KFFIW L H C NTAD +Q+R  N  LSP++C
Subjt:  PKKVKFFIWELSHACTNTADVIQRRNSNLALSPSYC
A0A5A7TR15 LINE-1 retrotransposable element ORF2 protein3.4e-0461.11Show/hide
Query:  PKKVKFFIWELSHACTNTADVIQRRNSNLALSPSYC
        PKK KFFIW L H C NTAD +Q+R  N  LSP++C
Subjt:  PKKVKFFIWELSHACTNTADVIQRRNSNLALSPSYC
A0A5A7TSA7 LINE-1 retrotransposable element ORF2 protein1.2e-0463.89Show/hide
Query:  PKKVKFFIWELSHACTNTADVIQRRNSNLALSPSYC
        PKK KFFIW L H C NTAD +Q+R  N ALSP++C
Subjt:  PKKVKFFIWELSHACTNTADVIQRRNSNLALSPSYC
A0A5D3E1E3 LINE-1 retrotransposable element ORF2 protein1.2e-0463.89Show/hide
Query:  PKKVKFFIWELSHACTNTADVIQRRNSNLALSPSYC
        PKK KFFIW L H C NTAD +Q+R  N ALSP++C
Subjt:  PKKVKFFIWELSHACTNTADVIQRRNSNLALSPSYC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAAGAAAGTTAAATTCTTCATCTGGGAGCTTAGCCACGCTTGCACCAACACCGCCGACGTCATTCAACGAAGAAACTCGAATTTAGCTCTCTCCCCCAGCTACTG
CAATGGAAGAGTGATGCACGATATGTTCTCCAAAGAGGCTGGAGACGATACCAGAAGGTTACAAGGGGATGAAGAGACTGTTAGGGTTCATGTCCCAAAAGAGTTGGAGG
CACATTCTCGATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAAAGAAAGTTAAATTCTTCATCTGGGAGCTTAGCCACGCTTGCACCAACACCGCCGACGTCATTCAACGAAGAAACTCGAATTTAGCTCTCTCCCCCAGCTACTG
CAATGGAAGAGTGATGCACGATATGTTCTCCAAAGAGGCTGGAGACGATACCAGAAGGTTACAAGGGGATGAAGAGACTGTTAGGGTTCATGTCCCAAAAGAGTTGGAGG
CACATTCTCGATAA
Protein sequenceShow/hide protein sequence
MPKKVKFFIWELSHACTNTADVIQRRNSNLALSPSYCNGRVMHDMFSKEAGDDTRRLQGDEETVRVHVPKELEAHSR