; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0014627 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014627
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCRM domain-containing protein
Genome locationchr12:2803071..2804883
RNA-Seq ExpressionLag0014627
SyntenyLag0014627
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001890 - RNA-binding, CRM domain
IPR035920 - YhbY-like superfamily
IPR040286 - CRM domain-containing protein At3g25440-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571683.1 putative CRM domain-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]6.0e-13984.82Show/hide
Query:  MPRSRGLSSAITRDSLFGVISLIRNVSYLSLLNIPTSFGQSSYGSCEHQRSDHVARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKKWQSVRHFSNAAV
        M R   LS AI+RDSL+G ISLIRNVS LSL NIP+SFGQSSY SCE+Q S+ +++S QESTS+  PP FFF  +RY+ CE LGGF+KWQSVRHFSN AV
Subjt:  MPRSRGLSSAITRDSLFGVISLIRNVSYLSLLNIPTSFGQSSYGSCEHQRSDHVARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKKWQSVRHFSNAAV

Query:  ELKTDSNVVRFSFGGSSVTKGSPPKQKKVVKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILT
        ELKTDSN+VRFSFGGSS T GSP KQKKV K KLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFEVPKSV ENYDPEILT
Subjt:  ELKTDSNVVRFSFGGSSVTKGSPPKQKKVVKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILT

Query:  EEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIKPNNTIIFYRGKNYVQPEVMSPPDTLS
        EEEKHYLKRTGEKKKNF+LLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHE+AEELARLSKGIV+DIKPNN+IIFYRGKNYV+PEVMSP DTLS
Subjt:  EEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIKPNNTIIFYRGKNYVQPEVMSPPDTLS

Query:  KDK
        KDK
Subjt:  KDK

KAG7011409.1 putative CRM domain-containing protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]9.2e-14084.82Show/hide
Query:  MPRSRGLSSAITRDSLFGVISLIRNVSYLSLLNIPTSFGQSSYGSCEHQRSDHVARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKKWQSVRHFSNAAV
        M R   LS AI+RDSL+G ISLIRNVS LSL NIP+SFGQSSY SCE+Q S+ +++S QESTS+  PP FFF  +RY+ CE LGGF+KWQSVRHFSN AV
Subjt:  MPRSRGLSSAITRDSLFGVISLIRNVSYLSLLNIPTSFGQSSYGSCEHQRSDHVARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKKWQSVRHFSNAAV

Query:  ELKTDSNVVRFSFGGSSVTKGSPPKQKKVVKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILT
        ELKTDSN+VRFSFGGSS T GSP KQKKV K KLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFEVPKSV ENYDPEILT
Subjt:  ELKTDSNVVRFSFGGSSVTKGSPPKQKKVVKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILT

Query:  EEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIKPNNTIIFYRGKNYVQPEVMSPPDTLS
        EEEKHYLKRTGEKKKNF+LLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHE+AEELARLSKGIV+DIKPNN+I+FYRGKNYV+PEVMSPPDTLS
Subjt:  EEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIKPNNTIIFYRGKNYVQPEVMSPPDTLS

Query:  KDK
        KDK
Subjt:  KDK

XP_022141994.1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Momordica charantia]4.1e-14085.15Show/hide
Query:  MPRSRGLSSAITRDSLFGVISLIRNVSYLSLLNIPTSFGQSSYGSCEHQRSDHVARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKKWQSVRHFSNAAV
        MPR R LS+A+TR+SL G ISLIRNVS  SL NIP SFGQS YGSCEHQRS+H+    QESTS+H PP F F+ RRYN  E+LGGFKKWQS RHF + AV
Subjt:  MPRSRGLSSAITRDSLFGVISLIRNVSYLSLLNIPTSFGQSSYGSCEHQRSDHVARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKKWQSVRHFSNAAV

Query:  ELKTDSNVVRFSFGGSSVTKGSPPKQKKVVKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILT
        ELKTDSN+VRFSFG  SVT GSPPKQKKV KTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFEV K V E YDPEILT
Subjt:  ELKTDSNVVRFSFGGSSVTKGSPPKQKKVVKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILT

Query:  EEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIKPNNTIIFYRGKNYVQPEVMSPPDTLS
        EEEKH+LKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHE+AEEL RLSKGIVVDIKPNN IIFYRGKNYVQPEVMSPPDTLS
Subjt:  EEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIKPNNTIIFYRGKNYVQPEVMSPPDTLS

Query:  KDK
        KDK
Subjt:  KDK

XP_022967603.1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbita maxima]2.6e-14286.47Show/hide
Query:  MPRSRGLSSAITRDSLFGVISLIRNVSYLSLLNIPTSFGQSSYGSCEHQRSDHVARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKKWQSVRHFSNAAV
        M R   LS AI+RDSL+G ISLIRNVS LSL NIPTSFGQSSY SCEHQ S+ +++S QESTS+  PP FFFT +RY+ CE LGGF+KWQSVRHFSN AV
Subjt:  MPRSRGLSSAITRDSLFGVISLIRNVSYLSLLNIPTSFGQSSYGSCEHQRSDHVARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKKWQSVRHFSNAAV

Query:  ELKTDSNVVRFSFGGSSVTKGSPPKQKKVVKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILT
        ELKTDSN+VRFSFGGSS T GSP KQKKV K KLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFEVPKSV ENYDPEILT
Subjt:  ELKTDSNVVRFSFGGSSVTKGSPPKQKKVVKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILT

Query:  EEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIKPNNTIIFYRGKNYVQPEVMSPPDTLS
        EEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHE+AEELARLSKGIV+DIKPNN+I+FYRGKNYVQPEVMSPPDTLS
Subjt:  EEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIKPNNTIIFYRGKNYVQPEVMSPPDTLS

Query:  KDK
        KDK
Subjt:  KDK

XP_038886904.1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic isoform X2 [Benincasa hispida]6.0e-13985.81Show/hide
Query:  MPRSRGLSSAITRDSLFGVISLIRNVSYLSLLNIPTSFGQSSYGSCEHQRSDHVARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKKWQSVRHFSNAAV
        MP  R LS AI+RDSLFG+ISLIRNV +LSLLNIPTSFGQSSYGSCEHQ S   A+S QES S+  PP F+F  RRY+ CE  GGFKKWQSVR+FSNAAV
Subjt:  MPRSRGLSSAITRDSLFGVISLIRNVSYLSLLNIPTSFGQSSYGSCEHQRSDHVARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKKWQSVRHFSNAAV

Query:  ELKTDSNVVRFSFGGSSVTKGSPPKQKKVVKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILT
        ELKTDS+ VRFSFGGSS   GSP KQ KV KTKLSKKAK+NELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFEVPKSV E YDPE+LT
Subjt:  ELKTDSNVVRFSFGGSSVTKGSPPKQKKVVKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILT

Query:  EEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIKPNNTIIFYRGKNYVQPEVMSPPDTLS
        EEEKHYLKR GEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIV+DIKPNN+IIFYRGKNYVQPEVMSPPDTLS
Subjt:  EEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIKPNNTIIFYRGKNYVQPEVMSPPDTLS

Query:  KDK
        KDK
Subjt:  KDK

TrEMBL top hitse value%identityAlignment
A0A1S3C151 uncharacterized CRM domain-containing protein At3g25440, chloroplastic4.2e-13081.91Show/hide
Query:  MPRSRGLS-SAITRDSLFGVISLIRNVSYLSLLNIPTSFGQSSYGSCEHQRSDHVARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKKWQSVRHFSNAA
        MPR RG S   I+R SLFG  SLIRN S LSLL++PTSFGQSS+GSCEHQ S  + +S  ESTS   PP    T  RY+  E  GGFK+WQSVRHFSNA 
Subjt:  MPRSRGLS-SAITRDSLFGVISLIRNVSYLSLLNIPTSFGQSSYGSCEHQRSDHVARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKKWQSVRHFSNAA

Query:  VELKTDSNVVRFSFGGSSVTKGSPPKQKKVVKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEIL
        VELKTDSN VRFSFG SS T GS  KQKKV KTKLSKK KLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFE+PKSV E YDPEIL
Subjt:  VELKTDSNVVRFSFGGSSVTKGSPPKQKKVVKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEIL

Query:  TEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIKPNNTIIFYRGKNYVQPEVMSPPDTL
        TEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMH+HWKKHETVKVICKPCKPGQVHE+AEEL+RLSKGIV+DIKPNN+IIFYRGKNYVQPEVMSPPDTL
Subjt:  TEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIKPNNTIIFYRGKNYVQPEVMSPPDTL

Query:  SKDK
        SKDK
Subjt:  SKDK

A0A5A7SK96 Putative CRM domain-containing protein3.3e-12783.39Show/hide
Query:  SLFGVISLIRNVSYLSLLNIPTSFGQSSYGSCEHQRSDHVARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKKWQSVRHFSNAAVELKTDSNVVRFSFG
        SLFG  SLIRN S LSLL++PTSFGQSS+GSCEHQ S  + +S  ESTS   PP    T  RY+  E  GGFK+WQSVRHFSNA VELKTDSN VRFSFG
Subjt:  SLFGVISLIRNVSYLSLLNIPTSFGQSSYGSCEHQRSDHVARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKKWQSVRHFSNAAVELKTDSNVVRFSFG

Query:  GSSVTKGSPPKQKKVVKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYLKRTGEKK
         SS T GS  KQKKV KTKLSKK KLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFE+PKSV E YDPEILTEEEKHYLKRTGEKK
Subjt:  GSSVTKGSPPKQKKVVKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYLKRTGEKK

Query:  KNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIKPNNTIIFYRGKNYVQPEVMSPPDTLSKDK
        KNFVLLGRRGVFGGVVLNMH+HWKKHETVKVICKPCKPGQVHE+AEEL+RLSKGIV+DIKPNN+IIFYRGKNYVQPEVMSPPDTLSKDK
Subjt:  KNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIKPNNTIIFYRGKNYVQPEVMSPPDTLSKDK

A0A6J1CKB1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic2.0e-14085.15Show/hide
Query:  MPRSRGLSSAITRDSLFGVISLIRNVSYLSLLNIPTSFGQSSYGSCEHQRSDHVARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKKWQSVRHFSNAAV
        MPR R LS+A+TR+SL G ISLIRNVS  SL NIP SFGQS YGSCEHQRS+H+    QESTS+H PP F F+ RRYN  E+LGGFKKWQS RHF + AV
Subjt:  MPRSRGLSSAITRDSLFGVISLIRNVSYLSLLNIPTSFGQSSYGSCEHQRSDHVARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKKWQSVRHFSNAAV

Query:  ELKTDSNVVRFSFGGSSVTKGSPPKQKKVVKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILT
        ELKTDSN+VRFSFG  SVT GSPPKQKKV KTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFEV K V E YDPEILT
Subjt:  ELKTDSNVVRFSFGGSSVTKGSPPKQKKVVKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILT

Query:  EEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIKPNNTIIFYRGKNYVQPEVMSPPDTLS
        EEEKH+LKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHE+AEEL RLSKGIVVDIKPNN IIFYRGKNYVQPEVMSPPDTLS
Subjt:  EEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIKPNNTIIFYRGKNYVQPEVMSPPDTLS

Query:  KDK
        KDK
Subjt:  KDK

A0A6J1HK68 uncharacterized CRM domain-containing protein At3g25440, chloroplastic2.9e-13984.82Show/hide
Query:  MPRSRGLSSAITRDSLFGVISLIRNVSYLSLLNIPTSFGQSSYGSCEHQRSDHVARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKKWQSVRHFSNAAV
        M R   LS AI+RDSL+G ISLIRNVS LSL NIP+SFGQSSY SCE+Q S+ +++S QESTS+  PP FFF  +RY+ CE LGGF+KWQSVRHFSN AV
Subjt:  MPRSRGLSSAITRDSLFGVISLIRNVSYLSLLNIPTSFGQSSYGSCEHQRSDHVARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKKWQSVRHFSNAAV

Query:  ELKTDSNVVRFSFGGSSVTKGSPPKQKKVVKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILT
        ELKTDSN+VRFSFGGSS T GSP KQKKV K KLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFEVPKSV ENYDPEILT
Subjt:  ELKTDSNVVRFSFGGSSVTKGSPPKQKKVVKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILT

Query:  EEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIKPNNTIIFYRGKNYVQPEVMSPPDTLS
        EEEKHYLKRTGEKKKNF+LLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHE+AEELARLSKGIV+DIKPNN+IIFYRGKNYV+PEVMSP DTLS
Subjt:  EEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIKPNNTIIFYRGKNYVQPEVMSPPDTLS

Query:  KDK
        KDK
Subjt:  KDK

A0A6J1HVJ0 uncharacterized CRM domain-containing protein At3g25440, chloroplastic1.3e-14286.47Show/hide
Query:  MPRSRGLSSAITRDSLFGVISLIRNVSYLSLLNIPTSFGQSSYGSCEHQRSDHVARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKKWQSVRHFSNAAV
        M R   LS AI+RDSL+G ISLIRNVS LSL NIPTSFGQSSY SCEHQ S+ +++S QESTS+  PP FFFT +RY+ CE LGGF+KWQSVRHFSN AV
Subjt:  MPRSRGLSSAITRDSLFGVISLIRNVSYLSLLNIPTSFGQSSYGSCEHQRSDHVARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKKWQSVRHFSNAAV

Query:  ELKTDSNVVRFSFGGSSVTKGSPPKQKKVVKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILT
        ELKTDSN+VRFSFGGSS T GSP KQKKV K KLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFEVPKSV ENYDPEILT
Subjt:  ELKTDSNVVRFSFGGSSVTKGSPPKQKKVVKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILT

Query:  EEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIKPNNTIIFYRGKNYVQPEVMSPPDTLS
        EEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHE+AEELARLSKGIV+DIKPNN+I+FYRGKNYVQPEVMSPPDTLS
Subjt:  EEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIKPNNTIIFYRGKNYVQPEVMSPPDTLS

Query:  KDK
        KDK
Subjt:  KDK

SwissProt top hitse value%identityAlignment
F4J2U9 CRM-domain containing factor CFM3A, chloroplastic/mitochondrial9.3e-1841.1Show/hide
Query:  RIRYSLEKAKRKEVWLIEKLRKFEV-PKSVAENYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAE
        ++   L  A+RK +     L K EV  K   +  DPE +T+EE+   ++ G K K F+LLGRRGVF G V NMHLHWK  E VK+I K      V + A 
Subjt:  RIRYSLEKAKRKEVWLIEKLRKFEV-PKSVAENYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAE

Query:  ELARLSKGIVVDI---KPNNTIIFYRGKNYVQPEVMSPPDTLSKDK
         L   S GI+V I        II YRG++Y +P ++ P + L+K K
Subjt:  ELARLSKGIVVDI---KPNNTIIFYRGKNYVQPEVMSPPDTLSKDK

Q2R1U8 CRM-domain containing factor CFM3, chloroplastic/mitochondrial1.6e-1736.99Show/hide
Query:  RIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYD-PEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAE
        ++ + L+ A++K       L K E      E    PE +T+EE+   ++ G + K F+LLGRRGVF G + NMHLHWK  E VK++ K    G V + A 
Subjt:  RIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYD-PEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAE

Query:  ELARLSKGIVVD---IKPNNTIIFYRGKNYVQPEVMSPPDTLSKDK
         L   S GI+V    +     I+ +RGK+Y +P  + P + LSK K
Subjt:  ELARLSKGIVVD---IKPNNTIIFYRGKNYVQPEVMSPPDTLSKDK

Q67XL4 Uncharacterized CRM domain-containing protein At3g25440, chloroplastic2.0e-3645.81Show/hide
Query:  KTDSNVVRFSFGGSSVTKGSPPKQKKVVKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEE
        +T  + +  S   SS    S  K K+  K    K+A +  L+ +R K KK+      E +I   L KA++KE  L+E ++K E  +S    +DPEILT E
Subjt:  KTDSNVVRFSFGGSSVTKGSPPKQKKVVKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEE

Query:  EKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIKPNNTIIFYRGKNYVQP--EVMSPPDTLS
        E  Y  + G K KN+V +GRRG++ GV+LNMHLHWKKH+T++V+ K   P +V E A ELARL+ GIV+D+   NTII YRGKNYVQP  E+MSP  TL 
Subjt:  EKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIKPNNTIIFYRGKNYVQP--EVMSPPDTLS

Query:  KDK
        + K
Subjt:  KDK

Q8L7C2 CRM-domain containing factor CFM2, chloroplastic4.9e-1934.17Show/hide
Query:  SFGGSSVTKGSPPKQKKVVKTKLSKKAK--LNELRLYRLKAKKKKTS----PNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKH
        S  G+ +T+     + + VK  +  +AK   + ++ +++K++++ +         +++  +LEK    E  L + L   E P+    + D E +T +EK+
Subjt:  SFGGSSVTKGSPPKQKKVVKTKLSKKAK--LNELRLYRLKAKKKKTS----PNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKH

Query:  YLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIK---PNNTIIFYRGKNYVQPEVMSPPDTLSK
         L++ G K K F+LLGRRGVF G + NMHLHWK  E VK+IC        H+ AE L   S GI+V ++       II YRGKNY +P+ + P   LSK
Subjt:  YLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIK---PNNTIIFYRGKNYVQPEVMSPPDTLSK

Q9LT57 CRM-domain containing factor CFM9, mitochondrial1.5e-3141.27Show/hide
Query:  GSSVTKGSPPKQKKVVKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYLKRTGEKK
        G S ++G   + K  V++++ K++      + R K  KKK   + E R+ Y+L++AK+K   L++KL+K+++P+  +  +DPE+ T E+    K+ G K 
Subjt:  GSSVTKGSPPKQKKVVKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYLKRTGEKK

Query:  KNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIKPNNTIIFYRGKNYVQPEVMSPPDTLSKDK
        KN+V +G RGVFGGVV NMH+HWK HETV+V C      ++ E A  +ARLS G+V++I    TII +RG+NY QP+ + P +TL+K K
Subjt:  KNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIKPNNTIIFYRGKNYVQPEVMSPPDTLSKDK

Arabidopsis top hitse value%identityAlignment
AT2G28480.1 RNA-binding CRS1 / YhbY (CRM) domain protein8.8e-4855.73Show/hide
Query:  PPKQ-----KKVVKTKLSKK------AKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYLKRTG
        PPK+     KK +K K  K+      A   + R   +K KKKK   N E RI+Y LEKAK KE  LIE+L+++EV K       P  +T EE+ YLK+ G
Subjt:  PPKQ-----KKVVKTKLSKK------AKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYLKRTG

Query:  EKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIKPNNTIIFYRGKNYVQPEVMSPPDTLSKDK
        +K+ N+V +GRRGVFGGV+LNMHLHWKKHETVKVIC   KPGQV ++AEELA+LS G+ V+I  ++TIIFYRGK YVQP+VMSP DTLSK +
Subjt:  EKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIKPNNTIIFYRGKNYVQPEVMSPPDTLSKDK

AT3G25440.1 RNA-binding CRS1 / YhbY (CRM) domain protein1.4e-3745.81Show/hide
Query:  KTDSNVVRFSFGGSSVTKGSPPKQKKVVKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEE
        +T  + +  S   SS    S  K K+  K    K+A +  L+ +R K KK+      E +I   L KA++KE  L+E ++K E  +S    +DPEILT E
Subjt:  KTDSNVVRFSFGGSSVTKGSPPKQKKVVKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEE

Query:  EKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIKPNNTIIFYRGKNYVQP--EVMSPPDTLS
        E  Y  + G K KN+V +GRRG++ GV+LNMHLHWKKH+T++V+ K   P +V E A ELARL+ GIV+D+   NTII YRGKNYVQP  E+MSP  TL 
Subjt:  EKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIKPNNTIIFYRGKNYVQP--EVMSPPDTLS

Query:  KDK
        + K
Subjt:  KDK

AT3G25440.2 RNA-binding CRS1 / YhbY (CRM) domain protein1.4e-3745.81Show/hide
Query:  KTDSNVVRFSFGGSSVTKGSPPKQKKVVKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEE
        +T  + +  S   SS    S  K K+  K    K+A +  L+ +R K KK+      E +I   L KA++KE  L+E ++K E  +S    +DPEILT E
Subjt:  KTDSNVVRFSFGGSSVTKGSPPKQKKVVKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEE

Query:  EKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIKPNNTIIFYRGKNYVQP--EVMSPPDTLS
        E  Y  + G K KN+V +GRRG++ GV+LNMHLHWKKH+T++V+ K   P +V E A ELARL+ GIV+D+   NTII YRGKNYVQP  E+MSP  TL 
Subjt:  EKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIKPNNTIIFYRGKNYVQP--EVMSPPDTLS

Query:  KDK
        + K
Subjt:  KDK

AT3G27550.1 RNA-binding CRS1 / YhbY (CRM) domain protein1.0e-3241.27Show/hide
Query:  GSSVTKGSPPKQKKVVKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYLKRTGEKK
        G S ++G   + K  V++++ K++      + R K  KKK   + E R+ Y+L++AK+K   L++KL+K+++P+  +  +DPE+ T E+    K+ G K 
Subjt:  GSSVTKGSPPKQKKVVKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYLKRTGEKK

Query:  KNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIKPNNTIIFYRGKNYVQPEVMSPPDTLSKDK
        KN+V +G RGVFGGVV NMH+HWK HETV+V C      ++ E A  +ARLS G+V++I    TII +RG+NY QP+ + P +TL+K K
Subjt:  KNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIKPNNTIIFYRGKNYVQPEVMSPPDTLSKDK

AT4G13070.1 RNA-binding CRS1 / YhbY (CRM) domain protein1.2e-8972.96Show/hide
Query:  RRYNGCEYLGGFKKWQSVRHFSNAAVELKTDSNVVRFSFGGSSVTKGS---PPKQKKVVKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAK
        +R+N   Y G F +    R+ SN+ +EL+TD NVVRF+F   S +  +     K+KK  + KLS+KAK+NELR YRLKAKKK  SPNPEVRIRY LEKAK
Subjt:  RRYNGCEYLGGFKKWQSVRHFSNAAVELKTDSNVVRFSFGGSSVTKGS---PPKQKKVVKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAK

Query:  RKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPC-KPGQVHEFAEELARLSKGIV
        RKE WLIEKLRK++VPKS AE YDPE LTEEE+HYLKRTGEK+KNFVL+GRRGVFGGVVLN+HLHWKKHETVKVICKPC KPGQVHE+AEELARLSKGIV
Subjt:  RKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPC-KPGQVHEFAEELARLSKGIV

Query:  VDIKPNNTIIFYRGKNYVQPEVMSPPDTLSKDK
        +D+KPNNTI+ YRGKNYV+PEVMSP DTLSKDK
Subjt:  VDIKPNNTIIFYRGKNYVQPEVMSPPDTLSKDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCGCAGTCGCGGTCTATCGAGCGCCATTACAAGGGATTCATTGTTTGGAGTCATTTCTCTGATTAGAAATGTGTCATATTTATCTTTATTGAACATACCCACATC
GTTTGGGCAGTCCTCATATGGAAGTTGTGAGCATCAAAGAAGTGATCATGTTGCAAGGTCTCCCCAGGAATCAACATCTGTACACTCTCCACCTGCCTTCTTTTTCACTA
GGAGGAGATATAATGGGTGTGAGTACCTTGGTGGATTTAAAAAATGGCAATCTGTTAGGCATTTTAGCAATGCAGCTGTGGAGCTGAAGACAGACAGCAATGTTGTCAGG
TTTTCTTTTGGTGGATCTTCTGTTACTAAGGGTTCCCCACCGAAACAAAAGAAGGTGGTCAAAACTAAATTGTCTAAGAAGGCCAAATTGAATGAACTCAGACTCTATCG
TCTTAAGGCGAAAAAGAAGAAGACATCTCCCAATCCAGAAGTTAGGATCAGATATTCCCTTGAAAAGGCCAAAAGGAAAGAAGTGTGGCTGATTGAGAAGTTGAGGAAAT
TTGAGGTTCCAAAATCTGTTGCAGAAAATTATGATCCTGAAATTCTTACTGAGGAAGAGAAGCACTACTTAAAGCGTACAGGGGAGAAAAAGAAGAACTTTGTTCTTTTG
GGGAGACGAGGAGTCTTTGGTGGAGTTGTTCTCAATATGCATCTGCATTGGAAGAAGCATGAAACTGTTAAAGTTATTTGCAAGCCTTGCAAGCCAGGGCAGGTTCACGA
ATTTGCTGAAGAGCTTGCTCGATTGAGCAAAGGCATTGTGGTTGACATTAAACCCAACAACACCATAATCTTCTATCGGGGGAAGAACTATGTGCAGCCTGAAGTAATGT
CACCTCCAGATACGCTATCAAAAGACAAGGTAACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCGCAGTCGCGGTCTATCGAGCGCCATTACAAGGGATTCATTGTTTGGAGTCATTTCTCTGATTAGAAATGTGTCATATTTATCTTTATTGAACATACCCACATC
GTTTGGGCAGTCCTCATATGGAAGTTGTGAGCATCAAAGAAGTGATCATGTTGCAAGGTCTCCCCAGGAATCAACATCTGTACACTCTCCACCTGCCTTCTTTTTCACTA
GGAGGAGATATAATGGGTGTGAGTACCTTGGTGGATTTAAAAAATGGCAATCTGTTAGGCATTTTAGCAATGCAGCTGTGGAGCTGAAGACAGACAGCAATGTTGTCAGG
TTTTCTTTTGGTGGATCTTCTGTTACTAAGGGTTCCCCACCGAAACAAAAGAAGGTGGTCAAAACTAAATTGTCTAAGAAGGCCAAATTGAATGAACTCAGACTCTATCG
TCTTAAGGCGAAAAAGAAGAAGACATCTCCCAATCCAGAAGTTAGGATCAGATATTCCCTTGAAAAGGCCAAAAGGAAAGAAGTGTGGCTGATTGAGAAGTTGAGGAAAT
TTGAGGTTCCAAAATCTGTTGCAGAAAATTATGATCCTGAAATTCTTACTGAGGAAGAGAAGCACTACTTAAAGCGTACAGGGGAGAAAAAGAAGAACTTTGTTCTTTTG
GGGAGACGAGGAGTCTTTGGTGGAGTTGTTCTCAATATGCATCTGCATTGGAAGAAGCATGAAACTGTTAAAGTTATTTGCAAGCCTTGCAAGCCAGGGCAGGTTCACGA
ATTTGCTGAAGAGCTTGCTCGATTGAGCAAAGGCATTGTGGTTGACATTAAACCCAACAACACCATAATCTTCTATCGGGGGAAGAACTATGTGCAGCCTGAAGTAATGT
CACCTCCAGATACGCTATCAAAAGACAAGGTAACCTGA
Protein sequenceShow/hide protein sequence
MPRSRGLSSAITRDSLFGVISLIRNVSYLSLLNIPTSFGQSSYGSCEHQRSDHVARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKKWQSVRHFSNAAVELKTDSNVVR
FSFGGSSVTKGSPPKQKKVVKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYLKRTGEKKKNFVLL
GRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEFAEELARLSKGIVVDIKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKVT