; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0014664 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014664
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionNuclear transcription factor Y subunit C
Genome locationchr12:3250347..3251138
RNA-Seq ExpressionLag0014664
SyntenyLag0014664
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR007125 - Histone H2A/H2B/H3
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136852.1 nuclear transcription factor Y subunit C-2 [Cucumis sativus]8.5e-13496.23Show/hide
Query:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSER   QQQSQQPAGGVGAGQL YSNPYQTAPMVASGTPA+TIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSD
        SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGA +QQPRP MPFMPWPHTQ QQQQQTQQQSD
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSD

XP_022157652.1 nuclear transcription factor Y subunit C-2 [Momordica charantia]1.2e-13094.36Show/hide
Query:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSER   QQQSQQPAGGVGAGQL YSNPY+T  MVASGTPA+TIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSDA
        SPADLPYYYVP QHPV A GMIMGKQLDQANMYG  +QQPRPPMPFMPWPHTQ QQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSDA

XP_022927856.1 nuclear transcription factor Y subunit C-2-like [Cucurbita moschata]4.1e-12892.94Show/hide
Query:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSER   QQQSQQ AGGVGAGQL YSNPYQTAPM ASGTPA+TIPPTQ PSSFSNSPHQLA+QQAQHFH QQQQQQQQQLQ+FWANQMQEIEQTTDFK
Subjt:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQT---QQQQQTQQQSDA
        SPADLPYYYVPSQHPV ATGMIMGKQLDQANMYGA +QQPRPP+PFMPWPHTQ    QQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQT---QQQQQTQQQSDA

XP_022988890.1 nuclear transcription factor Y subunit C-2-like [Cucurbita maxima]1.4e-12893.31Show/hide
Query:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSER   QQQSQQ AGGVGAGQL YSNPYQTAPM ASGTPA+TIPPTQ PSSFSNSPHQLA+QQAQHFH QQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQT---QQQQQTQQQSDA
        SPADLPYYYVPSQHPV ATGMIMGKQLDQANMYGA +QQPRPP+PFMPWPHTQ    QQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQT---QQQQQTQQQSDA

XP_038888434.1 nuclear transcription factor Y subunit C-2-like [Benincasa hispida]3.6e-13295.11Show/hide
Query:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSER    QQSQQPAG VGAGQL YSNPYQTAPMVASGTPA+TIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSDA
        SPADLPYYYVPSQHPVGATGMIMGKQLDQ NMYG  +QQPRP MPFMPWPHTQ QQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSDA

TrEMBL top hitse value%identityAlignment
A0A0A0K5U1 Histone domain-containing protein4.1e-13496.23Show/hide
Query:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSER   QQQSQQPAGGVGAGQL YSNPYQTAPMVASGTPA+TIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSD
        SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGA +QQPRP MPFMPWPHTQ QQQQQTQQQSD
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSD

A0A1S3C190 nuclear transcription factor Y subunit C-24.1e-13496.23Show/hide
Query:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSER   QQQSQQPAGGVGAGQL YSNPYQTAPMVASGTPA+TIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSD
        SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGA +QQPRP MPFMPWPHTQ QQQQQTQQQSD
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSD

A0A5A7SLP2 Nuclear transcription factor Y subunit C-24.1e-13496.23Show/hide
Query:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSER   QQQSQQPAGGVGAGQL YSNPYQTAPMVASGTPA+TIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSD
        SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGA +QQPRP MPFMPWPHTQ QQQQQTQQQSD
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSD

A0A6J1DV19 nuclear transcription factor Y subunit C-25.6e-13194.36Show/hide
Query:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSER   QQQSQQPAGGVGAGQL YSNPY+T  MVASGTPA+TIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSDA
        SPADLPYYYVP QHPV A GMIMGKQLDQANMYG  +QQPRPPMPFMPWPHTQ QQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSDA

A0A6J1JII4 nuclear transcription factor Y subunit C-2-like6.8e-12993.31Show/hide
Query:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSER   QQQSQQ AGGVGAGQL YSNPYQTAPM ASGTPA+TIPPTQ PSSFSNSPHQLA+QQAQHFH QQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQT---QQQQQTQQQSDA
        SPADLPYYYVPSQHPV ATGMIMGKQLDQANMYGA +QQPRPP+PFMPWPHTQ    QQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQT---QQQQQTQQQSDA

SwissProt top hitse value%identityAlignment
Q655V5 Nuclear transcription factor Y subunit C-41.5e-6460.38Show/hide
Query:  QPAGGVGAGQLSYSNPYQTAPMVASGTPAVTIPPTQPPSSFSNSP------HQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLAR
        QPA GV AG       Y+ A  V +  PAV    +QP  SF  +P      HQL YQQAQ FH Q QQQQQ+QLQ FWA ++ +IEQTTDFKNHSLPLAR
Subjt:  QPAGGVGAGQLSYSNPYQTAPMVASGTPAVTIPPTQPPSSFSNSP------HQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLAR

Query:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPAD-LPY
        IKKIMKADEDVRMISAEAPVIFAKACE+FILELTLRSW+HTEENKRRTLQKNDIAAAI+RTD++DFLVDI+PRD+LKEEG+G+ +A +P +G PAD  PY
Subjt:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPAD-LPY

Query:  -YYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQ-QTQQQSD
         YYVP Q   GA G+  G Q                  P   W   Q QQ++   +QQSD
Subjt:  -YYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQ-QTQQQSD

Q8L4B2 Nuclear transcription factor Y subunit C-94.6e-5858.06Show/hide
Query:  AGQLSY-SNPYQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADED
        +G ++Y +NPYQT PM    T A T+      +  +  P QLA+ Q     HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLARIKKIMKADED
Subjt:  AGQLSY-SNPYQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADED

Query:  VRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPYYYVPS-QHPV
        VRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY Y+P+   P+
Subjt:  VRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPYYYVPS-QHPV

Query:  GATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQS
        G  GM+MG      N  GA      PP P+M  P  Q Q   Q  Q++
Subjt:  GATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQS

Q8LCG7 Nuclear transcription factor Y subunit C-21.1e-6770.42Show/hide
Query:  MDQSERQQQSQQPAGGVGAGQLSYSNP--YQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKN
        M+QSE  QQ QQ       G + Y  P  YQ+ P+                    N+   +A+QQA HFHH  QQQQQQQLQMFWANQMQEIE TTDFKN
Subjt:  MDQSERQQQSQQPAGGVGAGQLSYSNP--YQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKN

Query:  HSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VVG
        H+LPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG+TK +IP VVG
Subjt:  HSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VVG

Query:  SPADLPYYYVPSQ
        SP   PYYY+  Q
Subjt:  SPADLPYYYVPSQ

Q9SMP0 Nuclear transcription factor Y subunit C-16.9e-5461.75Show/hide
Query:  AVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELT
        A  IPP  P ++ S +    +Y       H   QQQQQQLQ+FW  Q QEIEQ  DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT
Subjt:  AVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELT

Query:  LRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVGATGMIMGK
        +RSW+H EENKRRTLQKNDIAAAI+RTD+FDFLVDI+PRDE+K+E   +    + V  + + +PYYY P   P G  GM++G+
Subjt:  LRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVGATGMIMGK

Q9ZVL3 Nuclear transcription factor Y subunit C-32.9e-5254.69Show/hide
Query:  QQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIK
        QQ Q  A   G      SNPYQT  M            T P  S   + HQ+        H QQQQQ  QQLQ FW  Q +EIE+TTDFKNHSLPLARIK
Subjt:  QQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIK

Query:  KIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADLPYYYV
        KIMKADEDVRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG   A      + A  PY Y+
Subjt:  KIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADLPYYYV

Query:  -PSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSD
         P   P+G  GM+MG         GA      PP P+M  P    QQ    QQ  D
Subjt:  -PSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSD

Arabidopsis top hitse value%identityAlignment
AT1G08970.1 nuclear factor Y, subunit C93.3e-5958.06Show/hide
Query:  AGQLSY-SNPYQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADED
        +G ++Y +NPYQT PM    T A T+      +  +  P QLA+ Q     HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLARIKKIMKADED
Subjt:  AGQLSY-SNPYQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADED

Query:  VRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPYYYVPS-QHPV
        VRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY Y+P+   P+
Subjt:  VRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPYYYVPS-QHPV

Query:  GATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQS
        G  GM+MG      N  GA      PP P+M  P  Q Q   Q  Q++
Subjt:  GATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQS

AT1G08970.3 nuclear factor Y, subunit C93.3e-5958.06Show/hide
Query:  AGQLSY-SNPYQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADED
        +G ++Y +NPYQT PM    T A T+      +  +  P QLA+ Q     HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLARIKKIMKADED
Subjt:  AGQLSY-SNPYQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADED

Query:  VRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPYYYVPS-QHPV
        VRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY Y+P+   P+
Subjt:  VRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPYYYVPS-QHPV

Query:  GATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQS
        G  GM+MG      N  GA      PP P+M  P  Q Q   Q  Q++
Subjt:  GATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQS

AT1G08970.4 nuclear factor Y, subunit C93.3e-5958.06Show/hide
Query:  AGQLSY-SNPYQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADED
        +G ++Y +NPYQT PM    T A T+      +  +  P QLA+ Q     HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLARIKKIMKADED
Subjt:  AGQLSY-SNPYQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADED

Query:  VRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPYYYVPS-QHPV
        VRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY Y+P+   P+
Subjt:  VRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPYYYVPS-QHPV

Query:  GATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQS
        G  GM+MG      N  GA      PP P+M  P  Q Q   Q  Q++
Subjt:  GATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQS

AT1G56170.1 nuclear factor Y, subunit C27.8e-6970.42Show/hide
Query:  MDQSERQQQSQQPAGGVGAGQLSYSNP--YQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKN
        M+QSE  QQ QQ       G + Y  P  YQ+ P+                    N+   +A+QQA HFHH  QQQQQQQLQMFWANQMQEIE TTDFKN
Subjt:  MDQSERQQQSQQPAGGVGAGQLSYSNP--YQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKN

Query:  HSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VVG
        H+LPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG+TK +IP VVG
Subjt:  HSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VVG

Query:  SPADLPYYYVPSQ
        SP   PYYY+  Q
Subjt:  SPADLPYYYVPSQ

AT1G56170.2 nuclear factor Y, subunit C27.8e-6970.42Show/hide
Query:  MDQSERQQQSQQPAGGVGAGQLSYSNP--YQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKN
        M+QSE  QQ QQ       G + Y  P  YQ+ P+                    N+   +A+QQA HFHH  QQQQQQQLQMFWANQMQEIE TTDFKN
Subjt:  MDQSERQQQSQQPAGGVGAGQLSYSNP--YQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKN

Query:  HSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VVG
        H+LPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG+TK +IP VVG
Subjt:  HSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VVG

Query:  SPADLPYYYVPSQ
        SP   PYYY+  Q
Subjt:  SPADLPYYYVPSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCAATCAGAGCGTCAGCAACAATCACAGCAGCCTGCAGGTGGCGTCGGTGCAGGCCAGTTATCATATTCTAATCCTTACCAAACGGCGCCAATGGTCGCCTCCGG
AACTCCTGCCGTTACGATTCCCCCAACTCAGCCACCGTCCAGTTTCTCTAATTCTCCACATCAGCTTGCCTATCAGCAAGCTCAGCACTTTCACCACCAGCAGCAACAGC
AGCAGCAACAACAGCTCCAAATGTTTTGGGCAAACCAAATGCAAGAGATTGAACAAACTACTGACTTTAAGAACCACAGTCTCCCCCTCGCCCGAATCAAGAAAATAATG
AAAGCGGATGAAGACGTCCGAATGATTTCAGCTGAAGCACCAGTTATATTCGCAAAGGCATGTGAAATGTTCATCTTGGAGTTGACTCTGCGATCCTGGATTCATACAGA
AGAGAACAAAAGGAGAACGTTACAGAAGAATGATATTGCAGCTGCAATTTCACGGACCGATGTCTTTGATTTCTTGGTCGATATTATTCCTAGAGATGAACTGAAAGAGG
AAGGCCTCGGAATCACAAAAGCTTCTATTCCCGTAGTCGGTTCCCCTGCTGATCTTCCTTATTACTATGTTCCATCCCAGCATCCAGTTGGTGCTACAGGTATGATCATG
GGGAAGCAATTAGATCAAGCAAACATGTACGGTGCTGCTTCCCAACAGCCCCGACCACCGATGCCTTTCATGCCATGGCCGCACACTCAAACTCAGCAGCAGCAACAAAC
TCAGCAGCAAAGTGATGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATCAATCAGAGCGTCAGCAACAATCACAGCAGCCTGCAGGTGGCGTCGGTGCAGGCCAGTTATCATATTCTAATCCTTACCAAACGGCGCCAATGGTCGCCTCCGG
AACTCCTGCCGTTACGATTCCCCCAACTCAGCCACCGTCCAGTTTCTCTAATTCTCCACATCAGCTTGCCTATCAGCAAGCTCAGCACTTTCACCACCAGCAGCAACAGC
AGCAGCAACAACAGCTCCAAATGTTTTGGGCAAACCAAATGCAAGAGATTGAACAAACTACTGACTTTAAGAACCACAGTCTCCCCCTCGCCCGAATCAAGAAAATAATG
AAAGCGGATGAAGACGTCCGAATGATTTCAGCTGAAGCACCAGTTATATTCGCAAAGGCATGTGAAATGTTCATCTTGGAGTTGACTCTGCGATCCTGGATTCATACAGA
AGAGAACAAAAGGAGAACGTTACAGAAGAATGATATTGCAGCTGCAATTTCACGGACCGATGTCTTTGATTTCTTGGTCGATATTATTCCTAGAGATGAACTGAAAGAGG
AAGGCCTCGGAATCACAAAAGCTTCTATTCCCGTAGTCGGTTCCCCTGCTGATCTTCCTTATTACTATGTTCCATCCCAGCATCCAGTTGGTGCTACAGGTATGATCATG
GGGAAGCAATTAGATCAAGCAAACATGTACGGTGCTGCTTCCCAACAGCCCCGACCACCGATGCCTTTCATGCCATGGCCGCACACTCAAACTCAGCAGCAGCAACAAAC
TCAGCAGCAAAGTGATGCATAG
Protein sequenceShow/hide protein sequence
MDQSERQQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAVTIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIM
KADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVGATGMIM
GKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSDA