; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0014667 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014667
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr12:3280765..3285829
RNA-Seq ExpressionLag0014667
SyntenyLag0014667
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025725.1 retrotransposon gag protein [Cucumis melo var. makuwa]8.3e-2052.76Show/hide
Query:  EQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQSKRKMDNLEVKLLMKRFLEGETKSHYLD
        +QRTSVFDRIKP TTR SAFQR+SMA  EEENQC  ST  R SAF+RLS+STSKK RPSTS FDRLK+T+DQ +R+M +L+ K   +            D
Subjt:  EQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQSKRKMDNLEVKLLMKRFLEGETKSHYLD

Query:  HPKVKDLIKTMMKIRAFKIGGNTANAV
          K++  + + MK R   +G NT  ++
Subjt:  HPKVKDLIKTMMKIRAFKIGGNTANAV

KAA0044978.1 retrotransposon gag protein [Cucumis melo var. makuwa]7.0e-1969.88Show/hide
Query:  EQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQSKRKMDNLEVK
        +QRTSVFDRIKP TTR S FQR+SMA  EEENQC  ST  R SAF+RLS+STSKK RPSTS FDRLK+T+DQ +R+M +L+ K
Subjt:  EQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQSKRKMDNLEVK

KAA0048558.1 retrotransposon gag protein [Cucumis melo var. makuwa]5.4e-1959.62Show/hide
Query:  QRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQSKRKMDNLEVKLLMKRFLEGETKSHYLDH
        QRTSVFDRIKP TTR S FQR+SMA  EEENQC     TR SAF+RLS+STSKK RPSTS FDRLK+T+DQ +R+M +L+ K   K   + +  S    H
Subjt:  QRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQSKRKMDNLEVKLLMKRFLEGETKSHYLDH

Query:  PKVK
         K K
Subjt:  PKVK

KAA0050736.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.9e-1971.08Show/hide
Query:  EQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQSKRKMDNLEVK
        +QRTSVFDRIKP TTR S FQR+SMA  EEENQC MST TR SAF+RLS+S SKK RPSTS FDRLK+T+DQ +R+M +L+ K
Subjt:  EQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQSKRKMDNLEVK

KAA0062063.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.1e-1956.64Show/hide
Query:  EQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQSKRKMDNLEVKLLMKRFLEGETKSHYLD
        +QRT VFDRIKP TTR S FQR+SM   EEENQC MSTST+ S F+RLS+STSKK RPSTS FDRLK  +DQ +R+M  L+ KL    FLE +      D
Subjt:  EQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQSKRKMDNLEVKLLMKRFLEGETKSHYLD

Query:  HPKVKDLIKTMMK
          K+ + + + MK
Subjt:  HPKVKDLIKTMMK

TrEMBL top hitse value%identityAlignment
A0A5A7SMQ5 Retrotransposon gag protein4.0e-2052.76Show/hide
Query:  EQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQSKRKMDNLEVKLLMKRFLEGETKSHYLD
        +QRTSVFDRIKP TTR SAFQR+SMA  EEENQC  ST  R SAF+RLS+STSKK RPSTS FDRLK+T+DQ +R+M +L+ K   +            D
Subjt:  EQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQSKRKMDNLEVKLLMKRFLEGETKSHYLD

Query:  HPKVKDLIKTMMKIRAFKIGGNTANAV
          K++  + + MK R   +G NT  ++
Subjt:  HPKVKDLIKTMMKIRAFKIGGNTANAV

A0A5A7TL86 Retrotransposon gag protein3.4e-1953.85Show/hide
Query:  EQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQSKRKMDNLEVKLLMKRFLEGETKSHYLD
        ++RTSVFDRIKP TTR S FQR+SMA  EEENQC  S ST+  AF+RLS+STSKK RPSTS FDRLK+T+D+ +R+M   + KL    FLE        D
Subjt:  EQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQSKRKMDNLEVKLLMKRFLEGETKSHYLD

Query:  HPKVKDLIKTMMKIRAF
          K+ + + + MK + F
Subjt:  HPKVKDLIKTMMKIRAF

A0A5A7U974 Retrotransposon gag protein9.0e-2071.08Show/hide
Query:  EQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQSKRKMDNLEVK
        +QRTSVFDRIKP TTR S FQR+SMA  EEENQC MST TR SAF+RLS+S SKK RPSTS FDRLK+T+DQ +R+M +L+ K
Subjt:  EQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQSKRKMDNLEVK

A0A5A7V1P3 Ty3-gypsy retrotransposon protein2.0e-1956.64Show/hide
Query:  EQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQSKRKMDNLEVKLLMKRFLEGETKSHYLD
        +QRT VFDRIKP TTR S FQR+SM   EEENQC MSTST+ S F+RLS+STSKK RPSTS FDRLK  +DQ +R+M  L+ KL    FLE +      D
Subjt:  EQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQSKRKMDNLEVKLLMKRFLEGETKSHYLD

Query:  HPKVKDLIKTMMK
          K+ + + + MK
Subjt:  HPKVKDLIKTMMK

A0A5D3DYN4 Retrotransposon gag protein2.6e-1959.62Show/hide
Query:  QRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQSKRKMDNLEVKLLMKRFLEGETKSHYLDH
        QRTSVFDRIKP TTR S FQR+SMA  EEENQC     TR SAF+RLS+STSKK RPSTS FDRLK+T+DQ +R+M +L+ K   K   + +  S    H
Subjt:  QRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQSKRKMDNLEVKLLMKRFLEGETKSHYLDH

Query:  PKVK
         K K
Subjt:  PKVK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGAACAAAGGACCTCCGTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCGGCATTCCAAAGAATGAGTATGGCCGCGACAGAGGAAGAAAATCAATGTTC
GATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCGACCTTCAACATCTGTTTTTGATCGCCTCAAAGTAACAAGCGATC
AATCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTGATGAAAAGGTTCCTTGAAGGTGAAACCAAATCTCATTATCTTGACCATCCTAAAGTCAAGGACCTGATC
AAGACCATGATGAAGATAAGAGCTTTTAAAATTGGGGGCAACACAGCGAATGCAGTTGCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCTTCCCCAAT
TCGAAGTTTCACGCTTCGCTGCAGTTCCTTCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCAAGTTCGAAGGTTCTCACGCTTCGTGAGTTCTTCT
CCAAGTTGAAGTTCTCACGTGTTCGTGAGTTCCTTCTCCAAGTTCGAAGGTTCTTACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGTG
AAGTTCCTTCCTCCAAGTCTGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCAAGTTCGAAGGT
TCTCACGCGCTTCGGTGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTTACGCGCTTCGCTACAGTTCCTTCCTCCAAGTTCGAAGTTCCTTCCCCCAAGTTCGAAGGTTCT
CACACGCTTCGCTGCAGTTCCTTCCTCACAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTT
CCTCCAAGTTTGAAGGTTCTCACATCGCTTCGTTCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGTTCCTTCCTCCAAGTTCGAAGGTTTTCATGCGCTTTG
CTGCAGTTCCTTCTCTCCACGTTCAAAGGTTCTCACGCATTTCGCTACAGTTCATTTCCTCCAAGTTCAAAGGTTCTCACGCGCTTCGGTGAAGTTCCTTCCTCCAAGTC
TGAAGGTTCTCACGTGCTTCGGTGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTTACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTG
CAGTTTCTTCTCCCTAAGTTCGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGCTGCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTTG
CTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCC
TTCTCTCCACTGCTCATTCTCCAAGTTCGAAGGCGCTTCTCTCCTTGCTACTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGTTCCTCCTCCAAGTTCGAAG
GTTCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCTACTGCTCCTTCTCCAAGTTCGAAGGTGCTTCTCTCCACCCCTCTTTTTGAAGGTTC
GCCACTGAGGTTCTCCTTCTCCAAGTTCGAAGGTGGTGAAGTCACTGCAATGAATCTGATGACGACCGTTGTAGGCGAGTCGAGTCTGGTGACCACCCTTGCAGGAGTGC
ATGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCTGAAGGCGAATCTGGTGACTACCCCTGCA
GCCAATCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAAATCAACAATCCAACAAGTGATCCAAGA
GATCAACAAGCCAACGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAAGATCAACAAGCCAACCGATCGAACAGATCATCAAGCCAATTGACCGATC
AAGAAGATCAACAAGTCAGCAGACCGATCATCAAACCGATCATCCGAGAAGATCAACAAGTCAGTAGACCGATCATCCAAAAGATCAACAAGTCACAACAGGCTGATCCA
AGAGATCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGAACAAAGGACCTCCGTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCGGCATTCCAAAGAATGAGTATGGCCGCGACAGAGGAAGAAAATCAATGTTC
GATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCGACCTTCAACATCTGTTTTTGATCGCCTCAAAGTAACAAGCGATC
AATCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTGATGAAAAGGTTCCTTGAAGGTGAAACCAAATCTCATTATCTTGACCATCCTAAAGTCAAGGACCTGATC
AAGACCATGATGAAGATAAGAGCTTTTAAAATTGGGGGCAACACAGCGAATGCAGTTGCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCTTCCCCAAT
TCGAAGTTTCACGCTTCGCTGCAGTTCCTTCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCAAGTTCGAAGGTTCTCACGCTTCGTGAGTTCTTCT
CCAAGTTGAAGTTCTCACGTGTTCGTGAGTTCCTTCTCCAAGTTCGAAGGTTCTTACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGTG
AAGTTCCTTCCTCCAAGTCTGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCAAGTTCGAAGGT
TCTCACGCGCTTCGGTGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTTACGCGCTTCGCTACAGTTCCTTCCTCCAAGTTCGAAGTTCCTTCCCCCAAGTTCGAAGGTTCT
CACACGCTTCGCTGCAGTTCCTTCCTCACAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTT
CCTCCAAGTTTGAAGGTTCTCACATCGCTTCGTTCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGTTCCTTCCTCCAAGTTCGAAGGTTTTCATGCGCTTTG
CTGCAGTTCCTTCTCTCCACGTTCAAAGGTTCTCACGCATTTCGCTACAGTTCATTTCCTCCAAGTTCAAAGGTTCTCACGCGCTTCGGTGAAGTTCCTTCCTCCAAGTC
TGAAGGTTCTCACGTGCTTCGGTGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTTACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTG
CAGTTTCTTCTCCCTAAGTTCGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGCTGCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTTG
CTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCC
TTCTCTCCACTGCTCATTCTCCAAGTTCGAAGGCGCTTCTCTCCTTGCTACTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGTTCCTCCTCCAAGTTCGAAG
GTTCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCTACTGCTCCTTCTCCAAGTTCGAAGGTGCTTCTCTCCACCCCTCTTTTTGAAGGTTC
GCCACTGAGGTTCTCCTTCTCCAAGTTCGAAGGTGGTGAAGTCACTGCAATGAATCTGATGACGACCGTTGTAGGCGAGTCGAGTCTGGTGACCACCCTTGCAGGAGTGC
ATGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCTGAAGGCGAATCTGGTGACTACCCCTGCA
GCCAATCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAAATCAACAATCCAACAAGTGATCCAAGA
GATCAACAAGCCAACGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAAGATCAACAAGCCAACCGATCGAACAGATCATCAAGCCAATTGACCGATC
AAGAAGATCAACAAGTCAGCAGACCGATCATCAAACCGATCATCCGAGAAGATCAACAAGTCAGTAGACCGATCATCCAAAAGATCAACAAGTCACAACAGGCTGATCCA
AGAGATCATTAA
Protein sequenceShow/hide protein sequence
MGEQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQSKRKMDNLEVKLLMKRFLEGETKSHYLDHPKVKDLI
KTMMKIRAFKIGGNTANAVASSKFEGSHALRCSSSPIRSFTLRCSSFPSSKVLTRFAAVPSPSSKVLTLREFFSKLKFSRVREFLLQVRRFLRASLQFLPPSSKVLTRFV
KFLPPSLKVLTRFAAVPSPSSKVLTRFAAVPSSSSKVLTRFGEVPSSKFEGSYALRYSSFLQVRSSFPQVRRFSHASLQFLPHSSKVLTRFAAVPSPKFEGSHVASLQFL
PPSLKVLTSLRSLRFVAVPSSKFEVPSSKFEGFHALCCSSFSPRSKVLTHFATVHFLQVQRFSRASVKFLPPSLKVLTCFGEVPSSKFEGSYALRCSSFLQVRRFSRASL
QFLLPKFEVPSSKFEGSHALRCTVPSSKFEGSHALRCYLPPSSKVLSRAAAAPSSKFEGSLTRFARSFSKFEGLLSTAHSPSSKALLSLLLPPSSKVLSRAAAVPPPSSK
VPHALRSLLLQVRRRFSPTAPSPSSKVLLSTPLFEGSPLRFSFSKFEGGEVTAMNLMTTVVGESSLVTTLAGVHEGESGDYPCRLLRSPNKMGTGLAGVHLKANLVTTPA
ANRPIKKINKSAGRSSKRINKLTSRSNKSTIQQVIQEINKPTTDQEDQQVSRPIIQEDQQANRSNRSSSQLTDQEDQQVSRPIIKPIIREDQQVSRPIIQKINKSQQADP
RDH